RNA–Protein interactions for RNA: ENST00000515395.5

SSBP2-219, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2 BASIC

Gene SSBP2, Length 1,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-219ENST00000515395 EYA1Q99502 592 aa13.8□□□□□ -0.2
SSBP2-219ENST00000515395 MEGF6O75095 1541 aa13.79□□□□□ -0.2
SSBP2-219ENST00000515395 TNS1Q9HBL0 1735 aaKnown RBP13.78□□□□□ -0.2
SSBP2-219ENST00000515395 TRIM37O94972 964 aa13.78□□□□□ -0.2
SSBP2-219ENST00000515395 MARCH10Q8NA82 808 aaPredicted RBP13.78□□□□□ -0.2
SSBP2-219ENST00000515395 ZCRB1Q8TBF4 217 aaKnown RBP13.78□□□□□ -0.2
SSBP2-219ENST00000515395 DDX54Q8TDD1 881 aaKnown RBP13.78□□□□□ -0.2
SSBP2-219ENST00000515395 CFAP53Q96M91 514 aa13.78□□□□□ -0.2
SSBP2-219ENST00000515395 SHANK3Q9BYB0 1731 aa13.78□□□□□ -0.2
SSBP2-219ENST00000515395 NCAPD2Q15021 1401 aa13.76□□□□□ -0.21
SSBP2-219ENST00000515395 PKD1L3Q7Z443 1732 aa13.76□□□□□ -0.21
SSBP2-219ENST00000515395 DIAPH1O60610 1272 aaKnown RBP13.76□□□□□ -0.21
SSBP2-219ENST00000515395 BAG6P46379 1132 aa13.76□□□□□ -0.21
SSBP2-219ENST00000515395 IGSF1Q8N6C5 1336 aa13.76□□□□□ -0.21
SSBP2-219ENST00000515395 PPP2R1AP30153 589 aa13.75□□□□□ -0.21
SSBP2-219ENST00000515395 IL13P35225 146 aa13.75□□□□□ -0.21
SSBP2-219ENST00000515395 SPG7Q9UQ90 795 aa13.75□□□□□ -0.21
SSBP2-219ENST00000515395 PCDH11XQ9BZA7 1347 aa13.74□□□□□ -0.21
SSBP2-219ENST00000515395 PCDH11YQ9BZA8 1340 aa13.74□□□□□ -0.21
SSBP2-219ENST00000515395 PARD3Q8TEW0 1356 aa13.74□□□□□ -0.21
SSBP2-219ENST00000515395 BCL9O00512 1426 aa13.74□□□□□ -0.21
SSBP2-219ENST00000515395 NHSQ6T4R5 1651 aa13.74□□□□□ -0.21
SSBP2-219ENST00000515395 APBA3O96018 575 aa13.73□□□□□ -0.21
SSBP2-219ENST00000515395 RALBP1Q15311 655 aa13.73□□□□□ -0.21
SSBP2-219ENST00000515395 SULT6B1Q6IMI4 303 aa13.73□□□□□ -0.21
SSBP2-219ENST00000515395 DOT1LQ8TEK3 1739 aa13.73□□□□□ -0.21
SSBP2-219ENST00000515395 U2SURPO15042 1029 aaKnown RBP13.72□□□□□ -0.21
SSBP2-219ENST00000515395 BCL11BQ9C0K0 894 aaPredicted RBP13.72□□□□□ -0.21
SSBP2-219ENST00000515395 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.72□□□□□ -0.21
SSBP2-219ENST00000515395 NUDCQ9Y266 331 aa13.72□□□□□ -0.21
SSBP2-219ENST00000515395 PLEKHG2Q9H7P9 1386 aa13.72□□□□□ -0.21
SSBP2-219ENST00000515395 COL3A1P02461 1466 aaPredicted RBP13.71□□□□□ -0.21
SSBP2-219ENST00000515395 DEFB132Q7Z7B7 95 aa13.71□□□□□ -0.21
SSBP2-219ENST00000515395 ACSBG1Q96GR2 724 aa13.71□□□□□ -0.21
SSBP2-219ENST00000515395 PLEKHO1Q53GL0 409 aaPredicted RBP13.71□□□□□ -0.22
SSBP2-219ENST00000515395 AEBP1Q8IUX7 1158 aa13.71□□□□□ -0.22
SSBP2-219ENST00000515395 BTAF1O14981 1849 aa13.7□□□□□ -0.22
SSBP2-219ENST00000515395 KDRP35968 1356 aa13.7□□□□□ -0.22
SSBP2-219ENST00000515395 HMOX1P09601 288 aa13.7□□□□□ -0.22
SSBP2-219ENST00000515395 EN1Q05925 392 aaPredicted RBP13.7□□□□□ -0.22
SSBP2-219ENST00000515395 AMOTQ4VCS5 1084 aa13.7□□□□□ -0.22
SSBP2-219ENST00000515395 SYTL4Q96C24 671 aaPredicted RBP13.7□□□□□ -0.22
SSBP2-219ENST00000515395 RGPD3A6NKT7 1758 aaPredicted RBP13.69□□□□□ -0.22
SSBP2-219ENST00000515395 RGPD4Q7Z3J3 1758 aa13.69□□□□□ -0.22
SSBP2-219ENST00000515395 ITGB4P16144 1822 aa13.69□□□□□ -0.22
SSBP2-219ENST00000515395 IFNL2Q8IZJ0 200 aa13.69□□□□□ -0.22
SSBP2-219ENST00000515395 MYBBP1AQ9BQG0 1328 aaKnown RBP13.68□□□□□ -0.22
SSBP2-219ENST00000515395 CYP27B1O15528 508 aa13.68□□□□□ -0.22
SSBP2-219ENST00000515395 KCNQ2O43526 872 aa13.68□□□□□ -0.22
SSBP2-219ENST00000515395 VIRMAQ69YN4 1812 aaKnown RBP13.67□□□□□ -0.22
SSBP2-219ENST00000515395 PRIM1P49642 420 aaKnown RBP13.67□□□□□ -0.22
SSBP2-219ENST00000515395 C1orf141Q5JVX7 400 aa13.67□□□□□ -0.22
SSBP2-219ENST00000515395 ZNF530Q6P9A1 599 aaPredicted RBP13.67□□□□□ -0.22
SSBP2-219ENST00000515395 PLSCR1O15162 318 aa13.66□□□□□ -0.22
SSBP2-219ENST00000515395 U2AF1L5P0DN76 240 aaPredicted RBP13.66□□□□□ -0.22
SSBP2-219ENST00000515395 PHKG2P15735 406 aa13.66□□□□□ -0.22
SSBP2-219ENST00000515395 U2AF1Q01081 240 aaKnown RBP eCLIP13.66□□□□□ -0.22
SSBP2-219ENST00000515395 EZH2Q15910 746 aaKnown RBP13.66□□□□□ -0.22
SSBP2-219ENST00000515395 PTF1AQ7RTS3 328 aa13.66□□□□□ -0.22
SSBP2-219ENST00000515395 CNKSR2Q8WXI2 1034 aa13.66□□□□□ -0.22
SSBP2-219ENST00000515395 RREB1Q92766 1687 aa13.66□□□□□ -0.22
SSBP2-219ENST00000515395 TOGARAM1Q9Y4F4 1720 aa13.65□□□□□ -0.22
SSBP2-219ENST00000515395 HSP90AB1P08238 724 aaKnown RBP13.65□□□□□ -0.22
SSBP2-219ENST00000515395 NKX1-1Q15270 411 aaPredicted RBP13.65□□□□□ -0.22
SSBP2-219ENST00000515395 CAMKK2Q96RR4 588 aa13.65□□□□□ -0.22
SSBP2-219ENST00000515395 PRKRIP1Q9H875 184 aaPredicted RBP13.65□□□□□ -0.22
SSBP2-219ENST00000515395 RNF216Q9NWF9 866 aaPredicted RBP13.64□□□□□ -0.23
SSBP2-219ENST00000515395 NUP188Q5SRE5 1749 aa13.64□□□□□ -0.23
SSBP2-219ENST00000515395 NEFMP07197 916 aa13.63□□□□□ -0.23
SSBP2-219ENST00000515395 MPRIPQ6WCQ1 1025 aa13.63□□□□□ -0.23
SSBP2-219ENST00000515395 SCN11AQ9UI33 1791 aa13.63□□□□□ -0.23
SSBP2-219ENST00000515395 ANP32CO43423 234 aa13.62□□□□□ -0.23
SSBP2-219ENST00000515395 DCAF5Q96JK2 942 aa13.62□□□□□ -0.23
SSBP2-219ENST00000515395 FCHSD2O94868 740 aa13.61□□□□□ -0.23
SSBP2-219ENST00000515395 PRKAR2BP31323 418 aa13.61□□□□□ -0.23
SSBP2-219ENST00000515395 AKAP4Q5JQC9 854 aa13.61□□□□□ -0.23
SSBP2-219ENST00000515395 RSPH6AQ9H0K4 717 aa13.61□□□□□ -0.23
SSBP2-219ENST00000515395 PNNQ9H307 717 aaKnown RBP13.61□□□□□ -0.23
SSBP2-219ENST00000515395 TMOD3Q9NYL9 352 aa13.61□□□□□ -0.23
SSBP2-219ENST00000515395 LY75O60449 1722 aa13.61□□□□□ -0.23
SSBP2-219ENST00000515395 TXNRD1Q16881 649 aa13.6□□□□□ -0.23
SSBP2-219ENST00000515395 MTHFSDQ2M296 383 aaKnown RBP13.6□□□□□ -0.23
SSBP2-219ENST00000515395 NBPF14Q5TI25 921 aa13.6□□□□□ -0.23
SSBP2-219ENST00000515395 GAS2L2Q8NHY3 880 aa13.6□□□□□ -0.23
SSBP2-219ENST00000515395 ERVV-2B6SEH9 535 aa13.59□□□□□ -0.23
SSBP2-219ENST00000515395 CABP4P57796 275 aa13.58□□□□□ -0.23
SSBP2-219ENST00000515395 C1QBPQ07021 282 aaKnown RBP13.58□□□□□ -0.23
SSBP2-219ENST00000515395 WDR43Q15061 677 aaKnown RBP eCLIP13.58□□□□□ -0.23
SSBP2-219ENST00000515395 SMARCC1Q92922 1105 aaPredicted RBP13.58□□□□□ -0.23
SSBP2-219ENST00000515395 PIGBQ92521 554 aa13.58□□□□□ -0.24
SSBP2-219ENST00000515395 KDM6AO15550 1401 aaPredicted RBP13.57□□□□□ -0.24
SSBP2-219ENST00000515395 DLG5Q8TDM6 1919 aa13.57□□□□□ -0.24
SSBP2-219ENST00000515395 MAP3K5Q99683 1374 aa13.57□□□□□ -0.24
SSBP2-219ENST00000515395 GNAT3A8MTJ3 354 aa13.57□□□□□ -0.24
SSBP2-219ENST00000515395 SLC27A3Q5K4L6 730 aa13.57□□□□□ -0.24
SSBP2-219ENST00000515395 PROM2Q8N271 834 aa13.57□□□□□ -0.24
SSBP2-219ENST00000515395 PHACTR3Q96KR7 559 aa13.57□□□□□ -0.24
SSBP2-219ENST00000515395 MAPK8IP3Q9UPT6 1336 aa13.56□□□□□ -0.24
SSBP2-219ENST00000515395 PALLDQ8WX93 1383 aa13.56□□□□□ -0.24
SSBP2-219ENST00000515395 HMGB2P26583 209 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms