RNA–Protein interactions for RNA: ENST00000515391.5

CDK7-213, Transcript of cyclin dependent kinase 7, humanhuman

TSL 2

Gene CDK7, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-213ENST00000515391 PROM2Q8N271 834 aa17.94■□□□□ 0.46
CDK7-213ENST00000515391 ZCRB1Q8TBF4 217 aaKnown RBP17.94■□□□□ 0.46
CDK7-213ENST00000515391 WASHC2AQ641Q2 1341 aa17.94■□□□□ 0.46
CDK7-213ENST00000515391 KNSTRNQ9Y448 316 aa17.93■□□□□ 0.46
CDK7-213ENST00000515391 SHANK3Q9BYB0 1731 aa17.92■□□□□ 0.46
CDK7-213ENST00000515391 RAPGEF4Q8WZA2 1011 aa17.92■□□□□ 0.46
CDK7-213ENST00000515391 NHSQ6T4R5 1651 aa17.92■□□□□ 0.46
CDK7-213ENST00000515391 TATP17735 454 aaPredicted RBP17.91■□□□□ 0.46
CDK7-213ENST00000515391 NBPF14Q5TI25 921 aa17.91■□□□□ 0.46
CDK7-213ENST00000515391 MORC1Q86VD1 984 aa17.91■□□□□ 0.46
CDK7-213ENST00000515391 TXNRD1Q16881 649 aa17.9■□□□□ 0.46
CDK7-213ENST00000515391 EYA1Q99502 592 aa17.9■□□□□ 0.46
CDK7-213ENST00000515391 RGPD3A6NKT7 1758 aaPredicted RBP17.89■□□□□ 0.45
CDK7-213ENST00000515391 RGPD4Q7Z3J3 1758 aa17.89■□□□□ 0.45
CDK7-213ENST00000515391 ANO8Q9HCE9 1232 aaPredicted RBP17.89■□□□□ 0.45
CDK7-213ENST00000515391 NSD2O96028 1365 aa17.89■□□□□ 0.45
CDK7-213ENST00000515391 BTAF1O14981 1849 aa17.88■□□□□ 0.45
CDK7-213ENST00000515391 PRIM1P49642 420 aaKnown RBP17.88■□□□□ 0.45
CDK7-213ENST00000515391 EIF4A2Q14240 407 aaKnown RBP17.88■□□□□ 0.45
CDK7-213ENST00000515391 AMER1Q5JTC6 1135 aaPredicted RBP17.88■□□□□ 0.45
CDK7-213ENST00000515391 SYTL4Q96C24 671 aaPredicted RBP17.88■□□□□ 0.45
CDK7-213ENST00000515391 DOT1LQ8TEK3 1739 aa17.86■□□□□ 0.45
CDK7-213ENST00000515391 PER1O15534 1290 aaPredicted RBP17.86■□□□□ 0.45
CDK7-213ENST00000515391 CNGB1Q14028 1251 aaPredicted RBP17.86■□□□□ 0.45
CDK7-213ENST00000515391 NCAPD2Q15021 1401 aa17.85■□□□□ 0.45
CDK7-213ENST00000515391 CC2D1BQ5T0F9 858 aaKnown RBP17.85■□□□□ 0.45
CDK7-213ENST00000515391 CYP27B1O15528 508 aa17.84■□□□□ 0.45
CDK7-213ENST00000515391 NCBP3Q53F19 620 aaKnown RBP17.83■□□□□ 0.44
CDK7-213ENST00000515391 PDGFDQ9GZP0 370 aaPredicted RBP17.83■□□□□ 0.44
CDK7-213ENST00000515391 LRP5O75197 1615 aa17.83■□□□□ 0.44
CDK7-213ENST00000515391 PCDH11XQ9BZA7 1347 aa17.82■□□□□ 0.44
CDK7-213ENST00000515391 PCDH11YQ9BZA8 1340 aa17.82■□□□□ 0.44
CDK7-213ENST00000515391 KCNQ4P56696 695 aa17.82■□□□□ 0.44
CDK7-213ENST00000515391 LRRC4BQ9NT99 713 aa17.82■□□□□ 0.44
CDK7-213ENST00000515391 STK32BQ9NY57 414 aa17.81■□□□□ 0.44
CDK7-213ENST00000515391 PKD1L3Q7Z443 1732 aa17.81■□□□□ 0.44
CDK7-213ENST00000515391 IGSF1Q8N6C5 1336 aa17.79■□□□□ 0.44
CDK7-213ENST00000515391 SLC15A2Q16348 729 aa17.79■□□□□ 0.44
CDK7-213ENST00000515391 SPG7Q9UQ90 795 aa17.79■□□□□ 0.44
CDK7-213ENST00000515391 MTHFSP49914 203 aa17.78■□□□□ 0.44
CDK7-213ENST00000515391 AEBP1Q8IUX7 1158 aa17.78■□□□□ 0.44
CDK7-213ENST00000515391 ZNF827Q17R98 1081 aa17.77■□□□□ 0.44
CDK7-213ENST00000515391 MPRIPQ6WCQ1 1025 aa17.77■□□□□ 0.44
CDK7-213ENST00000515391 TOGARAM1Q9Y4F4 1720 aa17.77■□□□□ 0.44
CDK7-213ENST00000515391 IL13P35225 146 aa17.76■□□□□ 0.43
CDK7-213ENST00000515391 PAPPAQ13219 1627 aa17.76■□□□□ 0.43
CDK7-213ENST00000515391 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.75■□□□□ 0.43
CDK7-213ENST00000515391 CASZ1Q86V15 1759 aa17.75■□□□□ 0.43
CDK7-213ENST00000515391 ITGB4P16144 1822 aa17.75■□□□□ 0.43
CDK7-213ENST00000515391 ZBTB7AO95365 584 aa17.74■□□□□ 0.43
CDK7-213ENST00000515391 PHKG2P15735 406 aa17.74■□□□□ 0.43
CDK7-213ENST00000515391 NKX1-1Q15270 411 aaPredicted RBP17.74■□□□□ 0.43
CDK7-213ENST00000515391 SULT6B1Q6IMI4 303 aa17.74■□□□□ 0.43
CDK7-213ENST00000515391 IFNL2Q8IZJ0 200 aa17.74■□□□□ 0.43
CDK7-213ENST00000515391 SPON1Q9HCB6 807 aa17.74■□□□□ 0.43
CDK7-213ENST00000515391 LY75O60449 1722 aa17.74■□□□□ 0.43
CDK7-213ENST00000515391 SLC27A3Q5K4L6 730 aa17.73■□□□□ 0.43
CDK7-213ENST00000515391 ATF5Q9Y2D1 282 aaPredicted RBP17.73■□□□□ 0.43
CDK7-213ENST00000515391 PIGBQ92521 554 aa17.72■□□□□ 0.43
CDK7-213ENST00000515391 AKT1S1Q96B36 256 aa17.72■□□□□ 0.43
CDK7-213ENST00000515391 CCNL1Q9UK58 526 aaPredicted RBP17.72■□□□□ 0.43
CDK7-213ENST00000515391 NPC1L1Q9UHC9 1359 aa17.71■□□□□ 0.43
CDK7-213ENST00000515391 PLEKHO1Q53GL0 409 aaPredicted RBP17.71■□□□□ 0.43
CDK7-213ENST00000515391 HMOX1P09601 288 aa17.7■□□□□ 0.42
CDK7-213ENST00000515391 ZNF530Q6P9A1 599 aaPredicted RBP17.7■□□□□ 0.42
CDK7-213ENST00000515391 PALLDQ8WX93 1383 aa17.69■□□□□ 0.42
CDK7-213ENST00000515391 DIAPH1O60610 1272 aaKnown RBP17.68■□□□□ 0.42
CDK7-213ENST00000515391 TMOD3Q9NYL9 352 aa17.68■□□□□ 0.42
CDK7-213ENST00000515391 PPP1R1BQ9UD71 204 aaPredicted RBP17.68■□□□□ 0.42
CDK7-213ENST00000515391 KDRP35968 1356 aa17.67■□□□□ 0.42
CDK7-213ENST00000515391 AMOTQ4VCS5 1084 aa17.67■□□□□ 0.42
CDK7-213ENST00000515391 ASAP1Q9ULH1 1129 aa17.67■□□□□ 0.42
CDK7-213ENST00000515391 SRCAPQ6ZRS2 3230 aa17.67■□□□□ 0.42
CDK7-213ENST00000515391 PNPLA7Q6ZV29 1317 aa17.67■□□□□ 0.42
CDK7-213ENST00000515391 TUBGCP6Q96RT7 1819 aa17.66■□□□□ 0.42
CDK7-213ENST00000515391 PTGER2P43116 358 aa17.66■□□□□ 0.42
CDK7-213ENST00000515391 SMARCC1Q92922 1105 aaPredicted RBP17.66■□□□□ 0.42
CDK7-213ENST00000515391 TFCP2L1Q9NZI6 479 aa17.66■□□□□ 0.42
CDK7-213ENST00000515391 PLEKHG2Q9H7P9 1386 aa17.65■□□□□ 0.42
CDK7-213ENST00000515391 KDM6AO15550 1401 aaPredicted RBP17.64■□□□□ 0.42
CDK7-213ENST00000515391 COL3A1P02461 1466 aaPredicted RBP17.64■□□□□ 0.41
CDK7-213ENST00000515391 U2SURPO15042 1029 aaKnown RBP17.64■□□□□ 0.41
CDK7-213ENST00000515391 NPM3O75607 178 aaKnown RBP17.64■□□□□ 0.41
CDK7-213ENST00000515391 C1orf141Q5JVX7 400 aa17.64■□□□□ 0.41
CDK7-213ENST00000515391 DCAF5Q96JK2 942 aa17.64■□□□□ 0.41
CDK7-213ENST00000515391 MTFR1LQ9H019 292 aa17.64■□□□□ 0.41
CDK7-213ENST00000515391 ATG3Q9NT62 314 aa17.64■□□□□ 0.41
CDK7-213ENST00000515391 HSP90AB1P08238 724 aaKnown RBP17.63■□□□□ 0.41
CDK7-213ENST00000515391 C5P01031 1676 aa17.63■□□□□ 0.41
CDK7-213ENST00000515391 TAF1LQ8IZX4 1826 aa17.63■□□□□ 0.41
CDK7-213ENST00000515391 ERVV-2B6SEH9 535 aa17.62■□□□□ 0.41
CDK7-213ENST00000515391 PPP2R1AP30153 589 aa17.62■□□□□ 0.41
CDK7-213ENST00000515391 CABP4P57796 275 aa17.62■□□□□ 0.41
CDK7-213ENST00000515391 SMIM5Q71RC9 77 aa17.62■□□□□ 0.41
CDK7-213ENST00000515391 QSER1Q2KHR3 1735 aa17.61■□□□□ 0.41
CDK7-213ENST00000515391 LOC102724428A0A0B4J2F2 783 aa17.61■□□□□ 0.41
CDK7-213ENST00000515391 MSH5O43196 834 aa17.61■□□□□ 0.41
CDK7-213ENST00000515391 SIK1P57059 783 aa17.61■□□□□ 0.41
CDK7-213ENST00000515391 COL23A1Q86Y22 540 aaPredicted RBP17.61■□□□□ 0.41
CDK7-213ENST00000515391 SGIP1Q9BQI5 828 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms