RNA–Protein interactions for RNA: ENST00000515316.5

SPOCK3-224, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, human

TSL 4

Gene SPOCK3, Length 524 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPOCK3-224	ENST00000515316	CCDC125	Q86Z20	511 aa		33.9	■■■■□ 3.02
SPOCK3-224	ENST00000515316	COL3A1	P02461	1466 aa	Predicted RBP	33.89	■■■■□ 3.02
SPOCK3-224	ENST00000515316	DDX54	Q8TDD1	881 aa	Known RBP	33.89	■■■■□ 3.02
SPOCK3-224	ENST00000515316	U2SURP	O15042	1029 aa	Known RBP	33.88	■■■■□ 3.01
SPOCK3-224	ENST00000515316	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	33.88	■■■■□ 3.01
SPOCK3-224	ENST00000515316	SPG7	Q9UQ90	795 aa		33.88	■■■■□ 3.01
SPOCK3-224	ENST00000515316	PLEKHG2	Q9H7P9	1386 aa		33.86	■■■■□ 3.01
SPOCK3-224	ENST00000515316	AEBP1	Q8IUX7	1158 aa		33.85	■■■■□ 3.01
SPOCK3-224	ENST00000515316	KDR	P35968	1356 aa		33.85	■■■■□ 3.01
SPOCK3-224	ENST00000515316	ANP32C	O43423	234 aa		33.84	■■■■□ 3.01
SPOCK3-224	ENST00000515316	RGPD1	P0DJD0	1748 aa		33.84	■■■■□ 3.01
SPOCK3-224	ENST00000515316	PCDH11X	Q9BZA7	1347 aa		33.82	■■■■□ 3.01
SPOCK3-224	ENST00000515316	PCDH11Y	Q9BZA8	1340 aa		33.82	■■■■□ 3.01
SPOCK3-224	ENST00000515316	BCL9	O00512	1426 aa		33.82	■■■■□ 3
SPOCK3-224	ENST00000515316	HMOX1	P09601	288 aa		33.82	■■■■□ 3
SPOCK3-224	ENST00000515316	SF3B2	Q13435	895 aa	Known RBP	33.82	■■■■□ 3
SPOCK3-224	ENST00000515316	PLEKHO1	Q53GL0	409 aa	Predicted RBP	33.82	■■■■□ 3
SPOCK3-224	ENST00000515316	AMOT	Q4VCS5	1084 aa		33.81	■■■■□ 3
SPOCK3-224	ENST00000515316	TRIM37	O94972	964 aa		33.78	■■■■□ 3
SPOCK3-224	ENST00000515316	U2AF1L5	P0DN76	240 aa	Predicted RBP	33.78	■■■■□ 3
SPOCK3-224	ENST00000515316	U2AF1	Q01081	240 aa	Known RBP eCLIP	33.78	■■■■□ 3
SPOCK3-224	ENST00000515316	CYP27B1	O15528	508 aa		33.74	■■■□□ 2.99
SPOCK3-224	ENST00000515316	IFNL2	Q8IZJ0	200 aa		33.74	■■■□□ 2.99
SPOCK3-224	ENST00000515316	PKD1L3	Q7Z443	1732 aa		33.73	■■■□□ 2.99
SPOCK3-224	ENST00000515316	FCHSD2	O94868	740 aa		33.72	■■■□□ 2.99
SPOCK3-224	ENST00000515316	BCL11B	Q9C0K0	894 aa	Predicted RBP	33.72	■■■□□ 2.99
SPOCK3-224	ENST00000515316	EP400	Q96L91	3159 aa		33.72	■■■□□ 2.99
SPOCK3-224	ENST00000515316	SHANK3	Q9BYB0	1731 aa		33.7	■■■□□ 2.98
SPOCK3-224	ENST00000515316	PHKG2	P15735	406 aa		33.69	■■■□□ 2.98
SPOCK3-224	ENST00000515316	NKX1-1	Q15270	411 aa	Predicted RBP	33.69	■■■□□ 2.98
SPOCK3-224	ENST00000515316	ZNF530	Q6P9A1	599 aa	Predicted RBP	33.69	■■■□□ 2.98
SPOCK3-224	ENST00000515316	ACSBG1	Q96GR2	724 aa		33.69	■■■□□ 2.98
SPOCK3-224	ENST00000515316	HSP90AB1	P08238	724 aa	Known RBP	33.68	■■■□□ 2.98
SPOCK3-224	ENST00000515316	BAG6	P46379	1132 aa		33.68	■■■□□ 2.98
SPOCK3-224	ENST00000515316	RSPH6A	Q9H0K4	717 aa		33.68	■■■□□ 2.98
SPOCK3-224	ENST00000515316	APBA3	O96018	575 aa		33.67	■■■□□ 2.98
SPOCK3-224	ENST00000515316	C1orf141	Q5JVX7	400 aa		33.67	■■■□□ 2.98
SPOCK3-224	ENST00000515316	PNN	Q9H307	717 aa	Known RBP	33.67	■■■□□ 2.98
SPOCK3-224	ENST00000515316	PRKAR2B	P31323	418 aa		33.66	■■■□□ 2.98
SPOCK3-224	ENST00000515316	KCNQ2	O43526	872 aa		33.64	■■■□□ 2.98
SPOCK3-224	ENST00000515316	SBF2	Q86WG5	1849 aa		33.64	■■■□□ 2.98
SPOCK3-224	ENST00000515316	NEFM	P07197	916 aa		33.63	■■■□□ 2.97
SPOCK3-224	ENST00000515316	PRIM1	P49642	420 aa	Known RBP	33.63	■■■□□ 2.97
SPOCK3-224	ENST00000515316	MTHFSD	Q2M296	383 aa	Known RBP	33.62	■■■□□ 2.97
SPOCK3-224	ENST00000515316	SYTL4	Q96C24	671 aa	Predicted RBP	33.62	■■■□□ 2.97
SPOCK3-224	ENST00000515316	WDR43	Q15061	677 aa	Known RBP eCLIP	33.61	■■■□□ 2.97
SPOCK3-224	ENST00000515316	AKAP4	Q5JQC9	854 aa		33.61	■■■□□ 2.97
SPOCK3-224	ENST00000515316	GAS2L2	Q8NHY3	880 aa		33.61	■■■□□ 2.97
SPOCK3-224	ENST00000515316	DEFB132	Q7Z7B7	95 aa		33.6	■■■□□ 2.97
SPOCK3-224	ENST00000515316	DCAF5	Q96JK2	942 aa		33.6	■■■□□ 2.97
SPOCK3-224	ENST00000515316	PTF1A	Q7RTS3	328 aa		33.59	■■■□□ 2.97
SPOCK3-224	ENST00000515316	KAT6B	Q8WYB5	2073 aa		33.59	■■■□□ 2.97
SPOCK3-224	ENST00000515316	PHACTR3	Q96KR7	559 aa		33.57	■■■□□ 2.96
SPOCK3-224	ENST00000515316	NHS	Q6T4R5	1651 aa		33.57	■■■□□ 2.96
SPOCK3-224	ENST00000515316	TNS1	Q9HBL0	1735 aa	Known RBP	33.56	■■■□□ 2.96
SPOCK3-224	ENST00000515316	PLSCR1	O15162	318 aa		33.56	■■■□□ 2.96
SPOCK3-224	ENST00000515316	EN1	Q05925	392 aa	Predicted RBP	33.56	■■■□□ 2.96
SPOCK3-224	ENST00000515316	ERVV-2	B6SEH9	535 aa		33.54	■■■□□ 2.96
SPOCK3-224	ENST00000515316	MPRIP	Q6WCQ1	1025 aa		33.52	■■■□□ 2.96
SPOCK3-224	ENST00000515316	CAMKK2	Q96RR4	588 aa		33.52	■■■□□ 2.96
SPOCK3-224	ENST00000515316	PLEKHF1	Q96S99	279 aa		33.52	■■■□□ 2.96
SPOCK3-224	ENST00000515316	DOT1L	Q8TEK3	1739 aa		33.52	■■■□□ 2.96
SPOCK3-224	ENST00000515316	MRS2	Q9HD23	443 aa		33.51	■■■□□ 2.95
SPOCK3-224	ENST00000515316	MAPK8IP3	Q9UPT6	1336 aa		33.51	■■■□□ 2.95
SPOCK3-224	ENST00000515316	GNAT3	A8MTJ3	354 aa		33.5	■■■□□ 2.95
SPOCK3-224	ENST00000515316	TMOD3	Q9NYL9	352 aa		33.5	■■■□□ 2.95
SPOCK3-224	ENST00000515316	ADAMTS8	Q9UP79	889 aa		33.5	■■■□□ 2.95
SPOCK3-224	ENST00000515316	EZH2	Q15910	746 aa	Known RBP	33.49	■■■□□ 2.95
SPOCK3-224	ENST00000515316	CCDC184	Q52MB2	194 aa		33.49	■■■□□ 2.95
SPOCK3-224	ENST00000515316	CABP4	P57796	275 aa		33.48	■■■□□ 2.95
SPOCK3-224	ENST00000515316	DIEXF	Q68CQ4	756 aa	Known RBP	33.47	■■■□□ 2.95
SPOCK3-224	ENST00000515316	PIGB	Q92521	554 aa		33.47	■■■□□ 2.95
SPOCK3-224	ENST00000515316	MAP3K5	Q99683	1374 aa		33.47	■■■□□ 2.95
SPOCK3-224	ENST00000515316	RNMT	O43148	476 aa	Known RBP	33.46	■■■□□ 2.95
SPOCK3-224	ENST00000515316	KDM6A	O15550	1401 aa	Predicted RBP	33.45	■■■□□ 2.95
SPOCK3-224	ENST00000515316	BTAF1	O14981	1849 aa		33.44	■■■□□ 2.94
SPOCK3-224	ENST00000515316	LGR6	Q9HBX8	967 aa		33.44	■■■□□ 2.94
SPOCK3-224	ENST00000515316	TOGARAM1	Q9Y4F4	1720 aa		33.43	■■■□□ 2.94
SPOCK3-224	ENST00000515316	RTF1	Q92541	710 aa	Known RBP	33.43	■■■□□ 2.94
SPOCK3-224	ENST00000515316	SMARCC1	Q92922	1105 aa	Predicted RBP	33.43	■■■□□ 2.94
SPOCK3-224	ENST00000515316	RUNDC1	Q96C34	613 aa		33.43	■■■□□ 2.94
SPOCK3-224	ENST00000515316	HTATSF1	O43719	755 aa	Known RBP	33.42	■■■□□ 2.94
SPOCK3-224	ENST00000515316	NFE2L2	Q16236	605 aa		33.41	■■■□□ 2.94
SPOCK3-224	ENST00000515316	PNISR	Q8TF01	805 aa	Known RBP	33.41	■■■□□ 2.94
SPOCK3-224	ENST00000515316	ITGB4	P16144	1822 aa		33.41	■■■□□ 2.94
SPOCK3-224	ENST00000515316	TXNRD1	Q16881	649 aa		33.4	■■■□□ 2.94
SPOCK3-224	ENST00000515316	NFATC2IP	Q8NCF5	419 aa		33.4	■■■□□ 2.94
SPOCK3-224	ENST00000515316	RGPD3	A6NKT7	1758 aa	Predicted RBP	33.39	■■■□□ 2.94
SPOCK3-224	ENST00000515316	RGPD4	Q7Z3J3	1758 aa		33.39	■■■□□ 2.94
SPOCK3-224	ENST00000515316	CCDC146	Q8IYE0	955 aa		33.38	■■■□□ 2.93
SPOCK3-224	ENST00000515316	IL17RE	Q8NFR9	667 aa		33.38	■■■□□ 2.93
SPOCK3-224	ENST00000515316	SLC52A2	Q9HAB3	445 aa		33.38	■■■□□ 2.93
SPOCK3-224	ENST00000515316	PROM2	Q8N271	834 aa		33.37	■■■□□ 2.93
SPOCK3-224	ENST00000515316	SCN11A	Q9UI33	1791 aa		33.37	■■■□□ 2.93
SPOCK3-224	ENST00000515316	SLC27A3	Q5K4L6	730 aa		33.36	■■■□□ 2.93
SPOCK3-224	ENST00000515316	TEF	Q10587	303 aa		33.35	■■■□□ 2.93
SPOCK3-224	ENST00000515316	HMGB2	P26583	209 aa	Known RBP	33.34	■■■□□ 2.93
SPOCK3-224	ENST00000515316	ASAP1	Q9ULH1	1129 aa		33.34	■■■□□ 2.93
SPOCK3-224	ENST00000515316	TMPO	P42166	694 aa	Known RBP	33.33	■■■□□ 2.93
SPOCK3-224	ENST00000515316	NBPF14	Q5TI25	921 aa		33.33	■■■□□ 2.93

Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms