RNA–Protein interactions for RNA: ENST00000515066.6

AP3S1-208, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 2

Gene AP3S1, Length 1,670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-208ENST00000515066 OVOS2A0A0G2JMS6 1433 aa22.13■■□□□ 1.13
AP3S1-208ENST00000515066 RIPK4P57078 832 aa22.13■■□□□ 1.13
AP3S1-208ENST00000515066 UNC5CLQ8IV45 518 aa22.13■■□□□ 1.13
AP3S1-208ENST00000515066 DISP2A7MBM2 1401 aa22.12■■□□□ 1.13
AP3S1-208ENST00000515066 RAPGEF4Q8WZA2 1011 aa22.12■■□□□ 1.13
AP3S1-208ENST00000515066 MEX3CQ5U5Q3 659 aaKnown RBP22.11■■□□□ 1.13
AP3S1-208ENST00000515066 SPATA31A1Q5TZJ5 1347 aa22.11■■□□□ 1.13
AP3S1-208ENST00000515066 USP35Q9P2H5 1018 aa22.11■■□□□ 1.13
AP3S1-208ENST00000515066 SPATA31A5Q5VU36 1347 aa22.1■■□□□ 1.13
AP3S1-208ENST00000515066 SPATA31A7Q8IWB4 1347 aa22.1■■□□□ 1.13
AP3S1-208ENST00000515066 LRRC37A3O60309 1634 aa22.1■■□□□ 1.13
AP3S1-208ENST00000515066 GAS2L2Q8NHY3 880 aa22.1■■□□□ 1.13
AP3S1-208ENST00000515066 ADAMTS7Q9UKP4 1686 aa22.09■■□□□ 1.13
AP3S1-208ENST00000515066 AFF2P51816 1311 aa22.08■■□□□ 1.13
AP3S1-208ENST00000515066 TATP17735 454 aaPredicted RBP22.08■■□□□ 1.13
AP3S1-208ENST00000515066 AMOTQ4VCS5 1084 aa22.08■■□□□ 1.13
AP3S1-208ENST00000515066 IL2RBP14784 551 aa22.07■■□□□ 1.12
AP3S1-208ENST00000515066 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.07■■□□□ 1.12
AP3S1-208ENST00000515066 USP21Q9UK80 565 aa22.07■■□□□ 1.12
AP3S1-208ENST00000515066 SCN11AQ9UI33 1791 aa22.07■■□□□ 1.12
AP3S1-208ENST00000515066 VPS72Q15906 364 aa22.07■■□□□ 1.12
AP3S1-208ENST00000515066 PLEKHO1Q53GL0 409 aaPredicted RBP22.07■■□□□ 1.12
AP3S1-208ENST00000515066 MAP3K5Q99683 1374 aa22.06■■□□□ 1.12
AP3S1-208ENST00000515066 CDCA7LQ96GN5 454 aa22.06■■□□□ 1.12
AP3S1-208ENST00000515066 GLI3P10071 1580 aa22.05■■□□□ 1.12
AP3S1-208ENST00000515066 SPINK5Q9NQ38 1064 aaPredicted RBP22.05■■□□□ 1.12
AP3S1-208ENST00000515066 PDE3BQ13370 1112 aa22.04■■□□□ 1.12
AP3S1-208ENST00000515066 ZNF530Q6P9A1 599 aaPredicted RBP22.04■■□□□ 1.12
AP3S1-208ENST00000515066 THUMPD2Q9BTF0 503 aaKnown RBP22.04■■□□□ 1.12
AP3S1-208ENST00000515066 GOLGA2Q08379 1002 aa22.04■■□□□ 1.12
AP3S1-208ENST00000515066 DCTN1Q14203 1278 aa22.04■■□□□ 1.12
AP3S1-208ENST00000515066 WDR63Q8IWG1 891 aa22.04■■□□□ 1.12
AP3S1-208ENST00000515066 THRAP3Q9Y2W1 955 aaKnown RBP22.04■■□□□ 1.12
AP3S1-208ENST00000515066 ATRNO75882 1429 aa22.03■■□□□ 1.12
AP3S1-208ENST00000515066 GNAT3A8MTJ3 354 aa22.03■■□□□ 1.12
AP3S1-208ENST00000515066 LMOD3Q0VAK6 560 aa22.03■■□□□ 1.12
AP3S1-208ENST00000515066 SIPA1L3O60292 1781 aaPredicted RBP22.02■■□□□ 1.12
AP3S1-208ENST00000515066 SPG7Q9UQ90 795 aa22.02■■□□□ 1.12
AP3S1-208ENST00000515066 THSD7AQ9UPZ6 1657 aa22.02■■□□□ 1.12
AP3S1-208ENST00000515066 CYP27B1O15528 508 aa22.01■■□□□ 1.11
AP3S1-208ENST00000515066 HTATSF1O43719 755 aaKnown RBP22.01■■□□□ 1.11
AP3S1-208ENST00000515066 AKAP4Q5JQC9 854 aa22.01■■□□□ 1.11
AP3S1-208ENST00000515066 BARGINQ6ZT62 677 aa22.01■■□□□ 1.11
AP3S1-208ENST00000515066 MCM10Q7L590 875 aa22.01■■□□□ 1.11
AP3S1-208ENST00000515066 CEMIPQ8WUJ3 1361 aa22.01■■□□□ 1.11
AP3S1-208ENST00000515066 ZCRB1Q8TBF4 217 aaKnown RBP22.01■■□□□ 1.11
AP3S1-208ENST00000515066 CCDC9Q9Y3X0 531 aaKnown RBP22.01■■□□□ 1.11
AP3S1-208ENST00000515066 TNS2Q63HR2 1409 aa22.01■■□□□ 1.11
AP3S1-208ENST00000515066 SLFN5Q08AF3 891 aa22■■□□□ 1.11
AP3S1-208ENST00000515066 KDM6AO15550 1401 aaPredicted RBP21.99■■□□□ 1.11
AP3S1-208ENST00000515066 PHKG2P15735 406 aa21.99■■□□□ 1.11
AP3S1-208ENST00000515066 TRMT2AQ8IZ69 625 aaKnown RBP21.99■■□□□ 1.11
AP3S1-208ENST00000515066 IL17REQ8NFR9 667 aa21.99■■□□□ 1.11
AP3S1-208ENST00000515066 IL16Q14005 1332 aa21.99■■□□□ 1.11
AP3S1-208ENST00000515066 CENPBP07199 599 aaPredicted RBP21.98■■□□□ 1.11
AP3S1-208ENST00000515066 C1orf141Q5JVX7 400 aa21.98■■□□□ 1.11
AP3S1-208ENST00000515066 TOGARAM1Q9Y4F4 1720 aa21.98■■□□□ 1.11
AP3S1-208ENST00000515066 PCDH11XQ9BZA7 1347 aa21.98■■□□□ 1.11
AP3S1-208ENST00000515066 PCDH11YQ9BZA8 1340 aa21.98■■□□□ 1.11
AP3S1-208ENST00000515066 DUSP27Q5VZP5 1158 aa21.98■■□□□ 1.11
AP3S1-208ENST00000515066 RTF1Q92541 710 aaKnown RBP21.98■■□□□ 1.11
AP3S1-208ENST00000515066 CDCA7Q9BWT1 371 aaPredicted RBP21.98■■□□□ 1.11
AP3S1-208ENST00000515066 E9PSI1 815 aa21.97■■□□□ 1.11
AP3S1-208ENST00000515066 IFNL2Q8IZJ0 200 aa21.97■■□□□ 1.11
AP3S1-208ENST00000515066 MPRIPQ6WCQ1 1025 aa21.96■■□□□ 1.11
AP3S1-208ENST00000515066 LGR6Q9HBX8 967 aa21.96■■□□□ 1.11
AP3S1-208ENST00000515066 TRPC5Q9UL62 973 aaPredicted RBP21.96■■□□□ 1.11
AP3S1-208ENST00000515066 FAM98CQ17RN3 349 aaKnown RBP21.95■■□□□ 1.1
AP3S1-208ENST00000515066 GJD4Q96KN9 370 aaPredicted RBP21.95■■□□□ 1.1
AP3S1-208ENST00000515066 ZNF853P0CG23 659 aa21.95■■□□□ 1.1
AP3S1-208ENST00000515066 MRC1P22897 1456 aa21.94■■□□□ 1.1
AP3S1-208ENST00000515066 KAT6BQ8WYB5 2073 aa21.94■■□□□ 1.1
AP3S1-208ENST00000515066 RNMTO43148 476 aaKnown RBP21.94■■□□□ 1.1
AP3S1-208ENST00000515066 KDM3BQ7LBC6 1761 aa21.94■■□□□ 1.1
AP3S1-208ENST00000515066 CALD1Q05682 793 aaKnown RBP21.93■■□□□ 1.1
AP3S1-208ENST00000515066 ITGB4P16144 1822 aa21.93■■□□□ 1.1
AP3S1-208ENST00000515066 FANCIQ9NVI1 1328 aa21.92■■□□□ 1.1
AP3S1-208ENST00000515066 NKX1-1Q15270 411 aaPredicted RBP21.92■■□□□ 1.1
AP3S1-208ENST00000515066 QTRT2Q9H974 415 aaKnown RBP21.92■■□□□ 1.1
AP3S1-208ENST00000515066 IFT57Q9NWB7 429 aa21.92■■□□□ 1.1
AP3S1-208ENST00000515066 DDX54Q8TDD1 881 aaKnown RBP21.91■■□□□ 1.1
AP3S1-208ENST00000515066 TSR2Q969E8 191 aaKnown RBP21.91■■□□□ 1.1
AP3S1-208ENST00000515066 CFAP44Q96MT7 982 aa21.91■■□□□ 1.1
AP3S1-208ENST00000515066 EXOC5O00471 708 aa21.91■■□□□ 1.1
AP3S1-208ENST00000515066 DCAF5Q96JK2 942 aa21.91■■□□□ 1.1
AP3S1-208ENST00000515066 DDB1Q16531 1140 aa21.9■■□□□ 1.1
AP3S1-208ENST00000515066 BRWD3Q6RI45 1802 aa21.9■■□□□ 1.1
AP3S1-208ENST00000515066 DOT1LQ8TEK3 1739 aa21.9■■□□□ 1.1
AP3S1-208ENST00000515066 ONECUT3O60422 494 aaPredicted RBP21.89■■□□□ 1.1
AP3S1-208ENST00000515066 HSP90AB1P08238 724 aaKnown RBP21.89■■□□□ 1.1
AP3S1-208ENST00000515066 GNAI1P63096 354 aa21.89■■□□□ 1.1
AP3S1-208ENST00000515066 MYH16Q9H6N6 1097 aa21.89■■□□□ 1.1
AP3S1-208ENST00000515066 CHL1O00533 1208 aa21.88■■□□□ 1.09
AP3S1-208ENST00000515066 ZNF772Q68DY9 489 aaPredicted RBP21.88■■□□□ 1.09
AP3S1-208ENST00000515066 MBIPQ9NS73 344 aa21.88■■□□□ 1.09
AP3S1-208ENST00000515066 EP400Q96L91 3159 aa21.88■■□□□ 1.09
AP3S1-208ENST00000515066 LAS1LQ9Y4W2 734 aaKnown RBP21.88■■□□□ 1.09
AP3S1-208ENST00000515066 RGS17Q9UGC6 210 aaPredicted RBP21.87■■□□□ 1.09
AP3S1-208ENST00000515066 TAF7Q15545 349 aaPredicted RBP21.85■■□□□ 1.09
AP3S1-208ENST00000515066 ILDR1Q86SU0 546 aaPredicted RBP21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms