RNA–Protein interactions for RNA: ENST00000514962.5

CALCOCO2-224, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 765 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-224ENST00000514962 GPR153Q6NV75 609 aa7.89□□□□□ -1.15
CALCOCO2-224ENST00000514962 PLPP6Q8IY26 295 aa7.89□□□□□ -1.15
CALCOCO2-224ENST00000514962 RUNDC1Q96C34 613 aa7.89□□□□□ -1.15
CALCOCO2-224ENST00000514962 GTPBP4Q9BZE4 634 aaKnown RBP7.89□□□□□ -1.15
CALCOCO2-224ENST00000514962 ZKSCAN5Q9Y2L8 839 aa7.89□□□□□ -1.15
CALCOCO2-224ENST00000514962 R3HCC1Q9Y3T6 440 aaKnown RBP7.89□□□□□ -1.15
CALCOCO2-224ENST00000514962 SAMD9LQ8IVG5 1584 aa7.88□□□□□ -1.15
CALCOCO2-224ENST00000514962 K7ELQ4 463 aaPredicted RBP7.88□□□□□ -1.15
CALCOCO2-224ENST00000514962 TBC1D12O60347 775 aa7.88□□□□□ -1.15
CALCOCO2-224ENST00000514962 TNNT2P45379 298 aaPredicted RBP7.88□□□□□ -1.15
CALCOCO2-224ENST00000514962 PPP1R15BQ5SWA1 713 aa7.88□□□□□ -1.15
CALCOCO2-224ENST00000514962 ZKSCAN2Q63HK3 967 aa7.88□□□□□ -1.15
CALCOCO2-224ENST00000514962 CCDC82Q8N4S0 544 aa7.88□□□□□ -1.15
CALCOCO2-224ENST00000514962 FAM13BQ9NYF5 915 aa7.88□□□□□ -1.15
CALCOCO2-224ENST00000514962 MYO3AQ8NEV4 1616 aa7.88□□□□□ -1.15
CALCOCO2-224ENST00000514962 RLBP1P12271 317 aa7.87□□□□□ -1.15
CALCOCO2-224ENST00000514962 NUCB2P80303 420 aa7.87□□□□□ -1.15
CALCOCO2-224ENST00000514962 DSG2Q14126 1118 aa7.87□□□□□ -1.15
CALCOCO2-224ENST00000514962 VARS2Q5ST30 1063 aaKnown RBP7.87□□□□□ -1.15
CALCOCO2-224ENST00000514962 FOXD4L5Q5VV16 416 aaPredicted RBP7.87□□□□□ -1.15
CALCOCO2-224ENST00000514962 DZIP1LQ8IYY4 767 aaKnown RBP7.87□□□□□ -1.15
CALCOCO2-224ENST00000514962 FOXD4L4Q8WXT5 416 aaPredicted RBP7.87□□□□□ -1.15
CALCOCO2-224ENST00000514962 DDX19BQ9UMR2 479 aa7.87□□□□□ -1.15
CALCOCO2-224ENST00000514962 PCDHGA4Q9Y5G9 962 aa7.87□□□□□ -1.15
CALCOCO2-224ENST00000514962 DDX49Q9Y6V7 483 aaKnown RBP7.87□□□□□ -1.15
CALCOCO2-224ENST00000514962 CLTCL1P53675 1640 aa7.87□□□□□ -1.15
CALCOCO2-224ENST00000514962 ADGRB2O60241 1585 aa7.87□□□□□ -1.15
CALCOCO2-224ENST00000514962 CARMIL2Q6F5E8 1435 aa7.86□□□□□ -1.15
CALCOCO2-224ENST00000514962 PLEKHD1A6NEE1 506 aa7.86□□□□□ -1.15
CALCOCO2-224ENST00000514962 KIF20AO95235 890 aa7.86□□□□□ -1.15
CALCOCO2-224ENST00000514962 BAG4O95429 457 aaKnown RBP7.86□□□□□ -1.15
CALCOCO2-224ENST00000514962 FGD1P98174 961 aa7.86□□□□□ -1.15
CALCOCO2-224ENST00000514962 FLIIQ13045 1269 aa7.86□□□□□ -1.15
CALCOCO2-224ENST00000514962 TRPM2O94759 1503 aa7.86□□□□□ -1.15
CALCOCO2-224ENST00000514962 PLB1Q6P1J6 1458 aa7.86□□□□□ -1.15
CALCOCO2-224ENST00000514962 CDC42BPBQ9Y5S2 1711 aa7.86□□□□□ -1.15
CALCOCO2-224ENST00000514962 LETM1O95202 739 aaPredicted RBP7.85□□□□□ -1.15
CALCOCO2-224ENST00000514962 HMGN5P82970 282 aaKnown RBP7.85□□□□□ -1.15
CALCOCO2-224ENST00000514962 NUCB1Q02818 461 aa7.85□□□□□ -1.15
CALCOCO2-224ENST00000514962 RGL3Q3MIN7 710 aa7.85□□□□□ -1.15
CALCOCO2-224ENST00000514962 BMP2KLQ5H9B9 411 aa7.85□□□□□ -1.15
CALCOCO2-224ENST00000514962 TAF3Q5VWG9 929 aa7.85□□□□□ -1.15
CALCOCO2-224ENST00000514962 MYRIPQ8NFW9 859 aa7.85□□□□□ -1.15
CALCOCO2-224ENST00000514962 PRIMPOLQ96LW4 560 aa7.85□□□□□ -1.15
CALCOCO2-224ENST00000514962 UHRF1BP1LA0JNW5 1464 aa7.85□□□□□ -1.15
CALCOCO2-224ENST00000514962 ERVK-7P63135 1459 aa7.84□□□□□ -1.15
CALCOCO2-224ENST00000514962 NUDT7P0C024 238 aa7.84□□□□□ -1.15
CALCOCO2-224ENST00000514962 SSFA2P28290 1259 aa7.84□□□□□ -1.15
CALCOCO2-224ENST00000514962 GTF2F1P35269 517 aaKnown RBP eCLIP7.84□□□□□ -1.15
CALCOCO2-224ENST00000514962 ZSCAN23Q3MJ62 389 aa7.84□□□□□ -1.15
CALCOCO2-224ENST00000514962 FTSJ3Q8IY81 847 aaKnown RBP7.84□□□□□ -1.15
CALCOCO2-224ENST00000514962 KIF2CQ99661 725 aa7.84□□□□□ -1.15
CALCOCO2-224ENST00000514962 CHMP4BQ9H444 224 aaKnown RBP7.84□□□□□ -1.15
CALCOCO2-224ENST00000514962 CWC22Q9HCG8 908 aaKnown RBP7.84□□□□□ -1.15
CALCOCO2-224ENST00000514962 SBNO2Q9Y2G9 1366 aa7.84□□□□□ -1.16
CALCOCO2-224ENST00000514962 ATP10BO94823 1461 aa7.83□□□□□ -1.16
CALCOCO2-224ENST00000514962 CYP2E1P05181 493 aaPredicted RBP7.83□□□□□ -1.16
CALCOCO2-224ENST00000514962 KIAA2012Q0VF49 1180 aa7.83□□□□□ -1.16
CALCOCO2-224ENST00000514962 CAMK2BQ13554 666 aa7.83□□□□□ -1.16
CALCOCO2-224ENST00000514962 RABEP1Q15276 862 aa7.83□□□□□ -1.16
CALCOCO2-224ENST00000514962 TAF7LQ5H9L4 462 aa7.83□□□□□ -1.16
CALCOCO2-224ENST00000514962 PTCD2Q8WV60 388 aaKnown RBP7.83□□□□□ -1.16
CALCOCO2-224ENST00000514962 ARHGEF1Q92888 912 aaKnown RBP7.83□□□□□ -1.16
CALCOCO2-224ENST00000514962 KHSRPQ92945 711 aaKnown RBP eCLIP7.83□□□□□ -1.16
CALCOCO2-224ENST00000514962 RBSNQ9H1K0 784 aa7.83□□□□□ -1.16
CALCOCO2-224ENST00000514962 LMBRD1Q9NUN5 540 aa7.83□□□□□ -1.16
CALCOCO2-224ENST00000514962 IL16Q14005 1332 aa7.82□□□□□ -1.16
CALCOCO2-224ENST00000514962 MYOM2P54296 1465 aa7.82□□□□□ -1.16
CALCOCO2-224ENST00000514962 ZNF518AQ6AHZ1 1483 aa7.82□□□□□ -1.16
CALCOCO2-224ENST00000514962 MRC2Q9UBG0 1479 aa7.82□□□□□ -1.16
CALCOCO2-224ENST00000514962 PSDA5PKW4 1024 aaPredicted RBP7.82□□□□□ -1.16
CALCOCO2-224ENST00000514962 ZSCAN20P17040 1043 aaPredicted RBP7.82□□□□□ -1.16
CALCOCO2-224ENST00000514962 XPCQ01831 940 aaPredicted RBP7.82□□□□□ -1.16
CALCOCO2-224ENST00000514962 LRSAM1Q6UWE0 723 aa7.82□□□□□ -1.16
CALCOCO2-224ENST00000514962 DHX37Q8IY37 1157 aaKnown RBP7.82□□□□□ -1.16
CALCOCO2-224ENST00000514962 TCP11L2Q8N4U5 519 aa7.82□□□□□ -1.16
CALCOCO2-224ENST00000514962 CFAP53Q96M91 514 aa7.82□□□□□ -1.16
CALCOCO2-224ENST00000514962 TNNQ9UQP3 1299 aa7.82□□□□□ -1.16
CALCOCO2-224ENST00000514962 PPRC1Q5VV67 1664 aaKnown RBP7.82□□□□□ -1.16
CALCOCO2-224ENST00000514962 ABCC11Q96J66 1382 aa7.82□□□□□ -1.16
CALCOCO2-224ENST00000514962 INO80Q9ULG1 1556 aaPredicted RBP7.81□□□□□ -1.16
CALCOCO2-224ENST00000514962 PTPRTO14522 1441 aa7.81□□□□□ -1.16
CALCOCO2-224ENST00000514962 IPO8O15397 1037 aaKnown RBP7.81□□□□□ -1.16
CALCOCO2-224ENST00000514962 MBD3O95983 291 aa7.81□□□□□ -1.16
CALCOCO2-224ENST00000514962 HNRNPMP52272 730 aaKnown RBP eCLIP7.81□□□□□ -1.16
CALCOCO2-224ENST00000514962 UVSSAQ2YD98 709 aa7.81□□□□□ -1.16
CALCOCO2-224ENST00000514962 CHD1LQ86WJ1 897 aa7.81□□□□□ -1.16
CALCOCO2-224ENST00000514962 GAS2L2Q8NHY3 880 aa7.81□□□□□ -1.16
CALCOCO2-224ENST00000514962 ZNF428Q96B54 188 aa7.81□□□□□ -1.16
CALCOCO2-224ENST00000514962 GCC1Q96CN9 775 aa7.81□□□□□ -1.16
CALCOCO2-224ENST00000514962 MED14O60244 1454 aa7.81□□□□□ -1.16
CALCOCO2-224ENST00000514962 ERCC6Q03468 1493 aa7.81□□□□□ -1.16
CALCOCO2-224ENST00000514962 ZC3H13Q5T200 1668 aaKnown RBP7.8□□□□□ -1.16
CALCOCO2-224ENST00000514962 NOS1P29475 1434 aa7.8□□□□□ -1.16
CALCOCO2-224ENST00000514962 SYCP2Q9BX26 1530 aa7.8□□□□□ -1.16
CALCOCO2-224ENST00000514962 A0A0U1RQG5 324 aaPredicted RBP7.8□□□□□ -1.16
CALCOCO2-224ENST00000514962 CDC45O75419 566 aa7.8□□□□□ -1.16
CALCOCO2-224ENST00000514962 CAVIN1Q6NZI2 390 aaKnown RBP7.8□□□□□ -1.16
CALCOCO2-224ENST00000514962 ATF7IPQ6VMQ6 1270 aa7.8□□□□□ -1.16
CALCOCO2-224ENST00000514962 FBXW7Q969H0 707 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms