RNA–Protein interactions for RNA: ENST00000514934.1

SGCA-211, Transcript of sarcoglycan alpha, humanhuman

TSL 4

Gene SGCA, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-211ENST00000514934 ANO8Q9HCE9 1232 aaPredicted RBP20.39■□□□□ 0.85
SGCA-211ENST00000514934 QSER1Q2KHR3 1735 aa20.39■□□□□ 0.85
SGCA-211ENST00000514934 HSP90AB2PQ58FF8 381 aa20.38■□□□□ 0.85
SGCA-211ENST00000514934 EMILIN1Q9Y6C2 1016 aa20.37■□□□□ 0.85
SGCA-211ENST00000514934 NSD2O96028 1365 aa20.36■□□□□ 0.85
SGCA-211ENST00000514934 SMG6Q86US8 1419 aaKnown RBP20.35■□□□□ 0.85
SGCA-211ENST00000514934 COL24A1Q17RW2 1714 aa20.34■□□□□ 0.85
SGCA-211ENST00000514934 CGNL1Q0VF96 1302 aa20.33■□□□□ 0.85
SGCA-211ENST00000514934 TAF1LQ8IZX4 1826 aa20.32■□□□□ 0.84
SGCA-211ENST00000514934 USHBP1Q8N6Y0 703 aa20.32■□□□□ 0.84
SGCA-211ENST00000514934 ACSBG1Q96GR2 724 aa20.32■□□□□ 0.84
SGCA-211ENST00000514934 TXNRD1Q16881 649 aa20.31■□□□□ 0.84
SGCA-211ENST00000514934 PANK3Q9H999 370 aa20.31■□□□□ 0.84
SGCA-211ENST00000514934 POLKQ9UBT6 870 aa20.31■□□□□ 0.84
SGCA-211ENST00000514934 WASHC2AQ641Q2 1341 aa20.3■□□□□ 0.84
SGCA-211ENST00000514934 PDGFDQ9GZP0 370 aaPredicted RBP20.29■□□□□ 0.84
SGCA-211ENST00000514934 ZCRB1Q8TBF4 217 aaKnown RBP20.28■□□□□ 0.84
SGCA-211ENST00000514934 KIF7Q2M1P5 1343 aa20.27■□□□□ 0.84
SGCA-211ENST00000514934 NBPF14Q5TI25 921 aa20.27■□□□□ 0.84
SGCA-211ENST00000514934 DDX54Q8TDD1 881 aaKnown RBP20.27■□□□□ 0.84
SGCA-211ENST00000514934 POLR3GLQ9BT43 218 aa20.26■□□□□ 0.83
SGCA-211ENST00000514934 LRRC4BQ9NT99 713 aa20.26■□□□□ 0.83
SGCA-211ENST00000514934 C5P01031 1676 aa20.25■□□□□ 0.83
SGCA-211ENST00000514934 VIRMAQ69YN4 1812 aaKnown RBP20.24■□□□□ 0.83
SGCA-211ENST00000514934 CYP27B1O15528 508 aa20.23■□□□□ 0.83
SGCA-211ENST00000514934 EYA1Q99502 592 aa20.23■□□□□ 0.83
SGCA-211ENST00000514934 PRIM1P49642 420 aaKnown RBP20.22■□□□□ 0.83
SGCA-211ENST00000514934 AMER1Q5JTC6 1135 aaPredicted RBP20.22■□□□□ 0.83
SGCA-211ENST00000514934 EIF4A2Q14240 407 aaKnown RBP20.21■□□□□ 0.83
SGCA-211ENST00000514934 SLC15A2Q16348 729 aa20.21■□□□□ 0.83
SGCA-211ENST00000514934 PER1O15534 1290 aaPredicted RBP20.2■□□□□ 0.82
SGCA-211ENST00000514934 ZNF827Q17R98 1081 aa20.2■□□□□ 0.82
SGCA-211ENST00000514934 RAPGEF4Q8WZA2 1011 aa20.2■□□□□ 0.82
SGCA-211ENST00000514934 TATP17735 454 aaPredicted RBP20.19■□□□□ 0.82
SGCA-211ENST00000514934 IGSF1Q8N6C5 1336 aa20.19■□□□□ 0.82
SGCA-211ENST00000514934 PCDH11XQ9BZA7 1347 aa20.19■□□□□ 0.82
SGCA-211ENST00000514934 PCDH11YQ9BZA8 1340 aa20.19■□□□□ 0.82
SGCA-211ENST00000514934 PLEKHG2Q9H7P9 1386 aa20.19■□□□□ 0.82
SGCA-211ENST00000514934 PPM1GO15355 546 aaPredicted RBP20.18■□□□□ 0.82
SGCA-211ENST00000514934 PTGER2P43116 358 aa20.18■□□□□ 0.82
SGCA-211ENST00000514934 TNNT2P45379 298 aaPredicted RBP20.18■□□□□ 0.82
SGCA-211ENST00000514934 AKT1S1Q96B36 256 aa20.18■□□□□ 0.82
SGCA-211ENST00000514934 UBR3Q6ZT12 1888 aa20.18■□□□□ 0.82
SGCA-211ENST00000514934 NKX1-1Q15270 411 aaPredicted RBP20.17■□□□□ 0.82
SGCA-211ENST00000514934 SGIP1Q9BQI5 828 aa20.17■□□□□ 0.82
SGCA-211ENST00000514934 SPON1Q9HCB6 807 aa20.15■□□□□ 0.82
SGCA-211ENST00000514934 STK32BQ9NY57 414 aa20.15■□□□□ 0.82
SGCA-211ENST00000514934 SCN11AQ9UI33 1791 aa20.15■□□□□ 0.82
SGCA-211ENST00000514934 KCNQ4P56696 695 aa20.14■□□□□ 0.81
SGCA-211ENST00000514934 SLC27A3Q5K4L6 730 aa20.14■□□□□ 0.81
SGCA-211ENST00000514934 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.14■□□□□ 0.81
SGCA-211ENST00000514934 UTRNP46939 3433 aa20.14■□□□□ 0.81
SGCA-211ENST00000514934 C4BP0C0L5 1744 aa20.13■□□□□ 0.81
SGCA-211ENST00000514934 ZNF831Q5JPB2 1677 aa20.13■□□□□ 0.81
SGCA-211ENST00000514934 KDRP35968 1356 aa20.12■□□□□ 0.81
SGCA-211ENST00000514934 ZBTB7AO95365 584 aa20.12■□□□□ 0.81
SGCA-211ENST00000514934 SYTL4Q96C24 671 aaPredicted RBP20.12■□□□□ 0.81
SGCA-211ENST00000514934 COL3A1P02461 1466 aaPredicted RBP20.11■□□□□ 0.81
SGCA-211ENST00000514934 COL5A3P25940 1745 aaPredicted RBP20.11■□□□□ 0.81
SGCA-211ENST00000514934 PNPLA7Q6ZV29 1317 aa20.1■□□□□ 0.81
SGCA-211ENST00000514934 MORC1Q86VD1 984 aa20.1■□□□□ 0.81
SGCA-211ENST00000514934 KNSTRNQ9Y448 316 aa20.1■□□□□ 0.81
SGCA-211ENST00000514934 ADAMTS7Q9UKP4 1686 aa20.1■□□□□ 0.81
SGCA-211ENST00000514934 NPC1L1Q9UHC9 1359 aa20.09■□□□□ 0.81
SGCA-211ENST00000514934 PHKG2P15735 406 aa20.09■□□□□ 0.81
SGCA-211ENST00000514934 GOLGB1Q14789 3259 aaKnown RBP20.09■□□□□ 0.81
SGCA-211ENST00000514934 KDM6AO15550 1401 aaPredicted RBP20.09■□□□□ 0.81
SGCA-211ENST00000514934 IL13P35225 146 aa20.08■□□□□ 0.81
SGCA-211ENST00000514934 AEBP1Q8IUX7 1158 aa20.08■□□□□ 0.81
SGCA-211ENST00000514934 PALLDQ8WX93 1383 aa20.08■□□□□ 0.8
SGCA-211ENST00000514934 MYH14Q7Z406 1995 aaKnown RBP20.07■□□□□ 0.8
SGCA-211ENST00000514934 CICQ96RK0 1608 aaPredicted RBP20.07■□□□□ 0.8
SGCA-211ENST00000514934 PIGBQ92521 554 aa20.07■□□□□ 0.8
SGCA-211ENST00000514934 MTFR1LQ9H019 292 aa20.07■□□□□ 0.8
SGCA-211ENST00000514934 SPG7Q9UQ90 795 aa20.07■□□□□ 0.8
SGCA-211ENST00000514934 ATF5Q9Y2D1 282 aaPredicted RBP20.06■□□□□ 0.8
SGCA-211ENST00000514934 CCNL1Q9UK58 526 aaPredicted RBP20.05■□□□□ 0.8
SGCA-211ENST00000514934 MPRIPQ6WCQ1 1025 aa20.04■□□□□ 0.8
SGCA-211ENST00000514934 AMIGO3Q86WK7 504 aa20.03■□□□□ 0.8
SGCA-211ENST00000514934 TJP1Q07157 1748 aa20.02■□□□□ 0.8
SGCA-211ENST00000514934 IFNL2Q8IZJ0 200 aa20.02■□□□□ 0.8
SGCA-211ENST00000514934 MAP3K5Q99683 1374 aa20.02■□□□□ 0.8
SGCA-211ENST00000514934 CHD4Q14839 1912 aa20.02■□□□□ 0.79
SGCA-211ENST00000514934 MTHFSP49914 203 aa20.01■□□□□ 0.79
SGCA-211ENST00000514934 SIPA1L3O60292 1781 aaPredicted RBP20■□□□□ 0.79
SGCA-211ENST00000514934 MRC1P22897 1456 aa19.99■□□□□ 0.79
SGCA-211ENST00000514934 C4AP0C0L4 1744 aa19.99■□□□□ 0.79
SGCA-211ENST00000514934 SLC16A10Q8TF71 515 aa19.99■□□□□ 0.79
SGCA-211ENST00000514934 ASAP1Q9ULH1 1129 aa19.99■□□□□ 0.79
SGCA-211ENST00000514934 CC2D1BQ5T0F9 858 aaKnown RBP19.98■□□□□ 0.79
SGCA-211ENST00000514934 SULT6B1Q6IMI4 303 aa19.98■□□□□ 0.79
SGCA-211ENST00000514934 COL23A1Q86Y22 540 aaPredicted RBP19.98■□□□□ 0.79
SGCA-211ENST00000514934 PPP1R1BQ9UD71 204 aaPredicted RBP19.98■□□□□ 0.79
SGCA-211ENST00000514934 UBR2Q8IWV8 1755 aa19.98■□□□□ 0.79
SGCA-211ENST00000514934 ITPK1Q13572 414 aa19.97■□□□□ 0.79
SGCA-211ENST00000514934 SMARCC1Q92922 1105 aaPredicted RBP19.97■□□□□ 0.79
SGCA-211ENST00000514934 SLC4A9Q96Q91 983 aa19.97■□□□□ 0.79
SGCA-211ENST00000514934 ATG3Q9NT62 314 aa19.97■□□□□ 0.79
SGCA-211ENST00000514934 TFCP2L1Q9NZI6 479 aa19.97■□□□□ 0.79
SGCA-211ENST00000514934 LINC00116Q8NCU8 138 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms