RNA–Protein interactions for RNA: ENST00000514834.1

ITGA3-214, Transcript of integrin subunit alpha 3, humanhuman

TSL 1 (best)

Gene ITGA3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-214ENST00000514834 RGPD3A6NKT7 1758 aaPredicted RBP19.09■□□□□ 0.65
ITGA3-214ENST00000514834 RGPD4Q7Z3J3 1758 aa19.09■□□□□ 0.65
ITGA3-214ENST00000514834 SMG6Q86US8 1419 aaKnown RBP19.08■□□□□ 0.65
ITGA3-214ENST00000514834 WASHC2AQ641Q2 1341 aa19.08■□□□□ 0.65
ITGA3-214ENST00000514834 BTAF1O14981 1849 aa19.07■□□□□ 0.64
ITGA3-214ENST00000514834 ANO8Q9HCE9 1232 aaPredicted RBP19.07■□□□□ 0.64
ITGA3-214ENST00000514834 TXNRD1Q16881 649 aa19.05■□□□□ 0.64
ITGA3-214ENST00000514834 AMER1Q5JTC6 1135 aaPredicted RBP19.05■□□□□ 0.64
ITGA3-214ENST00000514834 RAPGEF4Q8WZA2 1011 aa19.05■□□□□ 0.64
ITGA3-214ENST00000514834 EYA1Q99502 592 aa19.05■□□□□ 0.64
ITGA3-214ENST00000514834 EIF4A2Q14240 407 aaKnown RBP19.04■□□□□ 0.64
ITGA3-214ENST00000514834 MORC1Q86VD1 984 aa19.04■□□□□ 0.64
ITGA3-214ENST00000514834 KNSTRNQ9Y448 316 aa19.04■□□□□ 0.64
ITGA3-214ENST00000514834 DOT1LQ8TEK3 1739 aa19.03■□□□□ 0.64
ITGA3-214ENST00000514834 NCAPD2Q15021 1401 aa19.03■□□□□ 0.64
ITGA3-214ENST00000514834 PER1O15534 1290 aaPredicted RBP19.03■□□□□ 0.64
ITGA3-214ENST00000514834 TATP17735 454 aaPredicted RBP19.03■□□□□ 0.64
ITGA3-214ENST00000514834 PRIM1P49642 420 aaKnown RBP19.03■□□□□ 0.64
ITGA3-214ENST00000514834 NBPF14Q5TI25 921 aa19.03■□□□□ 0.64
ITGA3-214ENST00000514834 NSD2O96028 1365 aa19.03■□□□□ 0.64
ITGA3-214ENST00000514834 ZEB1P37275 1124 aaPredicted RBP19.02■□□□□ 0.64
ITGA3-214ENST00000514834 LRP5O75197 1615 aa19.02■□□□□ 0.64
ITGA3-214ENST00000514834 CYP27B1O15528 508 aa19.01■□□□□ 0.63
ITGA3-214ENST00000514834 PDGFDQ9GZP0 370 aaPredicted RBP19.01■□□□□ 0.63
ITGA3-214ENST00000514834 SYTL4Q96C24 671 aaPredicted RBP19■□□□□ 0.63
ITGA3-214ENST00000514834 LRRC4BQ9NT99 713 aa18.99■□□□□ 0.63
ITGA3-214ENST00000514834 PKD1L3Q7Z443 1732 aa18.98■□□□□ 0.63
ITGA3-214ENST00000514834 KCNQ4P56696 695 aa18.98■□□□□ 0.63
ITGA3-214ENST00000514834 CNGB1Q14028 1251 aaPredicted RBP18.96■□□□□ 0.63
ITGA3-214ENST00000514834 CC2D1BQ5T0F9 858 aaKnown RBP18.96■□□□□ 0.63
ITGA3-214ENST00000514834 TOGARAM1Q9Y4F4 1720 aa18.96■□□□□ 0.63
ITGA3-214ENST00000514834 PCDH11XQ9BZA7 1347 aa18.96■□□□□ 0.63
ITGA3-214ENST00000514834 PCDH11YQ9BZA8 1340 aa18.96■□□□□ 0.63
ITGA3-214ENST00000514834 PAPPAQ13219 1627 aa18.95■□□□□ 0.62
ITGA3-214ENST00000514834 IGSF1Q8N6C5 1336 aa18.95■□□□□ 0.62
ITGA3-214ENST00000514834 CASZ1Q86V15 1759 aa18.94■□□□□ 0.62
ITGA3-214ENST00000514834 SLC15A2Q16348 729 aa18.93■□□□□ 0.62
ITGA3-214ENST00000514834 AEBP1Q8IUX7 1158 aa18.93■□□□□ 0.62
ITGA3-214ENST00000514834 LY75O60449 1722 aa18.92■□□□□ 0.62
ITGA3-214ENST00000514834 ZNF827Q17R98 1081 aa18.92■□□□□ 0.62
ITGA3-214ENST00000514834 STK32BQ9NY57 414 aa18.92■□□□□ 0.62
ITGA3-214ENST00000514834 ITGB4P16144 1822 aa18.92■□□□□ 0.62
ITGA3-214ENST00000514834 MTHFSP49914 203 aa18.91■□□□□ 0.62
ITGA3-214ENST00000514834 SPG7Q9UQ90 795 aa18.91■□□□□ 0.62
ITGA3-214ENST00000514834 IL13P35225 146 aa18.9■□□□□ 0.62
ITGA3-214ENST00000514834 NKX1-1Q15270 411 aaPredicted RBP18.9■□□□□ 0.62
ITGA3-214ENST00000514834 MPRIPQ6WCQ1 1025 aa18.9■□□□□ 0.62
ITGA3-214ENST00000514834 ZBTB7AO95365 584 aa18.89■□□□□ 0.61
ITGA3-214ENST00000514834 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.89■□□□□ 0.61
ITGA3-214ENST00000514834 PHKG2P15735 406 aa18.88■□□□□ 0.61
ITGA3-214ENST00000514834 PIGBQ92521 554 aa18.88■□□□□ 0.61
ITGA3-214ENST00000514834 AKT1S1Q96B36 256 aa18.88■□□□□ 0.61
ITGA3-214ENST00000514834 SLC27A3Q5K4L6 730 aa18.87■□□□□ 0.61
ITGA3-214ENST00000514834 SULT6B1Q6IMI4 303 aa18.87■□□□□ 0.61
ITGA3-214ENST00000514834 SPON1Q9HCB6 807 aa18.87■□□□□ 0.61
ITGA3-214ENST00000514834 NPC1L1Q9UHC9 1359 aa18.86■□□□□ 0.61
ITGA3-214ENST00000514834 ATF5Q9Y2D1 282 aaPredicted RBP18.86■□□□□ 0.61
ITGA3-214ENST00000514834 TUBGCP6Q96RT7 1819 aa18.86■□□□□ 0.61
ITGA3-214ENST00000514834 IFNL2Q8IZJ0 200 aa18.85■□□□□ 0.61
ITGA3-214ENST00000514834 CCNL1Q9UK58 526 aaPredicted RBP18.85■□□□□ 0.61
ITGA3-214ENST00000514834 KDRP35968 1356 aa18.83■□□□□ 0.61
ITGA3-214ENST00000514834 PALLDQ8WX93 1383 aa18.83■□□□□ 0.61
ITGA3-214ENST00000514834 PTGER2P43116 358 aa18.83■□□□□ 0.6
ITGA3-214ENST00000514834 HMOX1P09601 288 aa18.82■□□□□ 0.6
ITGA3-214ENST00000514834 PLEKHO1Q53GL0 409 aaPredicted RBP18.82■□□□□ 0.6
ITGA3-214ENST00000514834 ZNF530Q6P9A1 599 aaPredicted RBP18.82■□□□□ 0.6
ITGA3-214ENST00000514834 ASAP1Q9ULH1 1129 aa18.82■□□□□ 0.6
ITGA3-214ENST00000514834 PNPLA7Q6ZV29 1317 aa18.81■□□□□ 0.6
ITGA3-214ENST00000514834 COL3A1P02461 1466 aaPredicted RBP18.81■□□□□ 0.6
ITGA3-214ENST00000514834 TAF1LQ8IZX4 1826 aa18.81■□□□□ 0.6
ITGA3-214ENST00000514834 TMOD3Q9NYL9 352 aa18.8■□□□□ 0.6
ITGA3-214ENST00000514834 KDM6AO15550 1401 aaPredicted RBP18.8■□□□□ 0.6
ITGA3-214ENST00000514834 C5P01031 1676 aa18.79■□□□□ 0.6
ITGA3-214ENST00000514834 DIAPH1O60610 1272 aaKnown RBP18.79■□□□□ 0.6
ITGA3-214ENST00000514834 SGIP1Q9BQI5 828 aa18.79■□□□□ 0.6
ITGA3-214ENST00000514834 TFCP2L1Q9NZI6 479 aa18.79■□□□□ 0.6
ITGA3-214ENST00000514834 QSER1Q2KHR3 1735 aa18.79■□□□□ 0.6
ITGA3-214ENST00000514834 PLEKHG2Q9H7P9 1386 aa18.79■□□□□ 0.6
ITGA3-214ENST00000514834 AMOTQ4VCS5 1084 aa18.78■□□□□ 0.6
ITGA3-214ENST00000514834 SMIM5Q71RC9 77 aa18.78■□□□□ 0.6
ITGA3-214ENST00000514834 MTFR1LQ9H019 292 aa18.78■□□□□ 0.6
ITGA3-214ENST00000514834 ATG3Q9NT62 314 aa18.78■□□□□ 0.6
ITGA3-214ENST00000514834 PPP1R1BQ9UD71 204 aaPredicted RBP18.78■□□□□ 0.6
ITGA3-214ENST00000514834 AMIGO3Q86WK7 504 aa18.77■□□□□ 0.6
ITGA3-214ENST00000514834 SMARCC1Q92922 1105 aaPredicted RBP18.77■□□□□ 0.6
ITGA3-214ENST00000514834 DCAF5Q96JK2 942 aa18.77■□□□□ 0.6
ITGA3-214ENST00000514834 ERVV-2B6SEH9 535 aa18.75■□□□□ 0.59
ITGA3-214ENST00000514834 COL23A1Q86Y22 540 aaPredicted RBP18.75■□□□□ 0.59
ITGA3-214ENST00000514834 LOC102724428A0A0B4J2F2 783 aa18.74■□□□□ 0.59
ITGA3-214ENST00000514834 PPP2R1AP30153 589 aa18.74■□□□□ 0.59
ITGA3-214ENST00000514834 SIK1P57059 783 aa18.74■□□□□ 0.59
ITGA3-214ENST00000514834 ITPK1Q13572 414 aa18.74■□□□□ 0.59
ITGA3-214ENST00000514834 LINC00116Q8NCU8 138 aa18.74■□□□□ 0.59
ITGA3-214ENST00000514834 SLC4A9Q96Q91 983 aa18.74■□□□□ 0.59
ITGA3-214ENST00000514834 C4BP0C0L5 1744 aa18.74■□□□□ 0.59
ITGA3-214ENST00000514834 U2SURPO15042 1029 aaKnown RBP18.73■□□□□ 0.59
ITGA3-214ENST00000514834 HSP90AB1P08238 724 aaKnown RBP18.73■□□□□ 0.59
ITGA3-214ENST00000514834 MTHFSDQ2M296 383 aaKnown RBP18.73■□□□□ 0.59
ITGA3-214ENST00000514834 C1orf141Q5JVX7 400 aa18.73■□□□□ 0.59
ITGA3-214ENST00000514834 LGR6Q9HBX8 967 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms