RNA–Protein interactions for RNA: ENST00000514642.1

CCDC30-214, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 6,827 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-214ENST00000514642 BEGAINQ9BUH8 593 aa8.97□□□□□ -0.97
CCDC30-214ENST00000514642 DNAI2Q9GZS0 605 aa8.97□□□□□ -0.97
CCDC30-214ENST00000514642 ANKRD18BA2A2Z9 1011 aa8.97□□□□□ -0.97
CCDC30-214ENST00000514642 TNIP1Q15025 636 aa8.97□□□□□ -0.97
CCDC30-214ENST00000514642 SETDB2Q96T68 719 aa8.97□□□□□ -0.97
CCDC30-214ENST00000514642 SIL1Q9H173 461 aa8.97□□□□□ -0.97
CCDC30-214ENST00000514642 TRIM21P19474 475 aaKnown RBP8.97□□□□□ -0.97
CCDC30-214ENST00000514642 SYCP2Q9BX26 1530 aa8.97□□□□□ -0.97
CCDC30-214ENST00000514642 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.97□□□□□ -0.97
CCDC30-214ENST00000514642 USP21Q9UK80 565 aa8.97□□□□□ -0.97
CCDC30-214ENST00000514642 ACEP12821 1306 aa8.96□□□□□ -0.97
CCDC30-214ENST00000514642 NME9Q86XW9 330 aa8.96□□□□□ -0.97
CCDC30-214ENST00000514642 IL2RBP14784 551 aa8.96□□□□□ -0.97
CCDC30-214ENST00000514642 TDO2P48775 406 aa8.96□□□□□ -0.97
CCDC30-214ENST00000514642 NFE2L2Q16236 605 aa8.96□□□□□ -0.97
CCDC30-214ENST00000514642 ZNF76P36508 570 aa8.96□□□□□ -0.98
CCDC30-214ENST00000514642 MYD88Q99836 296 aa8.96□□□□□ -0.98
CCDC30-214ENST00000514642 EHMT1Q9H9B1 1298 aa8.96□□□□□ -0.98
CCDC30-214ENST00000514642 RTCBQ9Y3I0 505 aaKnown RBP8.96□□□□□ -0.98
CCDC30-214ENST00000514642 KRT18P05783 430 aaKnown RBP8.96□□□□□ -0.98
CCDC30-214ENST00000514642 ODF2Q5BJF6 829 aa8.96□□□□□ -0.98
CCDC30-214ENST00000514642 FOXD4L1Q9NU39 408 aa8.96□□□□□ -0.98
CCDC30-214ENST00000514642 MSNP26038 577 aaKnown RBP8.96□□□□□ -0.98
CCDC30-214ENST00000514642 HYPKQ9NX55 129 aa8.96□□□□□ -0.98
CCDC30-214ENST00000514642 UGGT2Q9NYU1 1516 aa8.96□□□□□ -0.98
CCDC30-214ENST00000514642 NOP58Q9Y2X3 529 aaKnown RBP8.96□□□□□ -0.98
CCDC30-214ENST00000514642 RRP1P56182 461 aaKnown RBP8.95□□□□□ -0.98
CCDC30-214ENST00000514642 WDR78Q5VTH9 848 aa8.95□□□□□ -0.98
CCDC30-214ENST00000514642 JDP2Q8WYK2 163 aa8.95□□□□□ -0.98
CCDC30-214ENST00000514642 MYCNP04198 464 aaPredicted RBP8.95□□□□□ -0.98
CCDC30-214ENST00000514642 FKBP4Q02790 459 aaKnown RBP eCLIP8.95□□□□□ -0.98
CCDC30-214ENST00000514642 TXLNAP40222 546 aa8.95□□□□□ -0.98
CCDC30-214ENST00000514642 IFIT5Q13325 482 aaKnown RBP8.95□□□□□ -0.98
CCDC30-214ENST00000514642 CT47B1P0C2W7 299 aaPredicted RBP8.95□□□□□ -0.98
CCDC30-214ENST00000514642 FAM161AQ3B820 660 aa8.95□□□□□ -0.98
CCDC30-214ENST00000514642 TRPM2O94759 1503 aa8.95□□□□□ -0.98
CCDC30-214ENST00000514642 EXOSC9Q06265 439 aaKnown RBP8.94□□□□□ -0.98
CCDC30-214ENST00000514642 SPTY2D1Q68D10 685 aaPredicted RBP8.94□□□□□ -0.98
CCDC30-214ENST00000514642 PAF1Q8N7H5 531 aa8.94□□□□□ -0.98
CCDC30-214ENST00000514642 C14orf93Q9H972 538 aaKnown RBP8.94□□□□□ -0.98
CCDC30-214ENST00000514642 CT47A1Q5JQC4 288 aaPredicted RBP8.94□□□□□ -0.98
CCDC30-214ENST00000514642 CRBNQ96SW2 442 aa8.94□□□□□ -0.98
CCDC30-214ENST00000514642 GSTO1P78417 241 aa8.94□□□□□ -0.98
CCDC30-214ENST00000514642 KCNA6P17658 529 aa8.94□□□□□ -0.98
CCDC30-214ENST00000514642 FOXD4L5Q5VV16 416 aaPredicted RBP8.94□□□□□ -0.98
CCDC30-214ENST00000514642 PPP4R3AQ6IN85 833 aa8.94□□□□□ -0.98
CCDC30-214ENST00000514642 FOXD4L4Q8WXT5 416 aaPredicted RBP8.94□□□□□ -0.98
CCDC30-214ENST00000514642 WDR63Q8IWG1 891 aa8.94□□□□□ -0.98
CCDC30-214ENST00000514642 SMC3Q9UQE7 1217 aa8.94□□□□□ -0.98
CCDC30-214ENST00000514642 ADGRF5Q8IZF2 1346 aa8.93□□□□□ -0.98
CCDC30-214ENST00000514642 LDHCP07864 332 aa8.93□□□□□ -0.98
CCDC30-214ENST00000514642 CCDC152Q4G0S7 254 aa8.93□□□□□ -0.98
CCDC30-214ENST00000514642 NSD2O96028 1365 aa8.93□□□□□ -0.98
CCDC30-214ENST00000514642 ZBED9Q6R2W3 1325 aa8.93□□□□□ -0.98
CCDC30-214ENST00000514642 GOLGA6L19H0YKK7 550 aa8.93□□□□□ -0.98
CCDC30-214ENST00000514642 CABP5Q9NP86 173 aa8.93□□□□□ -0.98
CCDC30-214ENST00000514642 SCLT1Q96NL6 688 aa8.93□□□□□ -0.98
CCDC30-214ENST00000514642 CCDC85AQ96PX6 553 aaPredicted RBP8.93□□□□□ -0.98
CCDC30-214ENST00000514642 SPINK5Q9NQ38 1064 aaPredicted RBP8.93□□□□□ -0.98
CCDC30-214ENST00000514642 CTNNA3Q9UI47 895 aa8.93□□□□□ -0.98
CCDC30-214ENST00000514642 GLIPR1L2Q4G1C9 344 aa8.93□□□□□ -0.98
CCDC30-214ENST00000514642 STK11IPQ8N1F8 1099 aa8.93□□□□□ -0.98
CCDC30-214ENST00000514642 AIDAQ96BJ3 306 aa8.93□□□□□ -0.98
CCDC30-214ENST00000514642 ABCF2Q9UG63 623 aa8.93□□□□□ -0.98
CCDC30-214ENST00000514642 CEP170Q5SW79 1584 aa8.93□□□□□ -0.98
CCDC30-214ENST00000514642 MATR3P43243 847 aaKnown RBP eCLIP8.93□□□□□ -0.98
CCDC30-214ENST00000514642 FOSBP53539 338 aa8.93□□□□□ -0.98
CCDC30-214ENST00000514642 CUL5Q93034 780 aa8.93□□□□□ -0.98
CCDC30-214ENST00000514642 UBAC1Q9BSL1 405 aa8.93□□□□□ -0.98
CCDC30-214ENST00000514642 ADAMTS8Q9UP79 889 aa8.93□□□□□ -0.98
CCDC30-214ENST00000514642 HLA-DOAP06340 250 aa8.92□□□□□ -0.98
CCDC30-214ENST00000514642 PPIP5K1Q6PFW1 1433 aa8.92□□□□□ -0.98
CCDC30-214ENST00000514642 TRIM22Q8IYM9 498 aa8.92□□□□□ -0.98
CCDC30-214ENST00000514642 RBM17Q96I25 401 aaKnown RBP8.92□□□□□ -0.98
CCDC30-214ENST00000514642 RPRD2Q5VT52 1461 aaKnown RBP8.92□□□□□ -0.98
CCDC30-214ENST00000514642 AACSQ86V21 672 aa8.92□□□□□ -0.98
CCDC30-214ENST00000514642 OGFOD1Q8N543 542 aa8.92□□□□□ -0.98
CCDC30-214ENST00000514642 LRRCC1Q9C099 1032 aa8.92□□□□□ -0.98
CCDC30-214ENST00000514642 BTG4Q9NY30 223 aa8.92□□□□□ -0.98
CCDC30-214ENST00000514642 SCAF11Q99590 1463 aaKnown RBP8.92□□□□□ -0.98
CCDC30-214ENST00000514642 MAP3K1Q13233 1512 aa8.92□□□□□ -0.98
CCDC30-214ENST00000514642 CDC45O75419 566 aa8.92□□□□□ -0.98
CCDC30-214ENST00000514642 IPO7O95373 1038 aaKnown RBP8.92□□□□□ -0.98
CCDC30-214ENST00000514642 TRAPPC3LQ5T215 181 aa8.92□□□□□ -0.98
CCDC30-214ENST00000514642 NOB1Q9ULX3 412 aaKnown RBP8.92□□□□□ -0.98
CCDC30-214ENST00000514642 GPATCH8Q9UKJ3 1502 aaKnown RBP8.92□□□□□ -0.98
CCDC30-214ENST00000514642 RXRBP28702 533 aa8.92□□□□□ -0.98
CCDC30-214ENST00000514642 EYA3Q99504 573 aa8.92□□□□□ -0.98
CCDC30-214ENST00000514642 NEO1Q92859 1461 aa8.92□□□□□ -0.98
CCDC30-214ENST00000514642 SNRPA1P09661 255 aaKnown RBP8.91□□□□□ -0.98
CCDC30-214ENST00000514642 FEZ1Q99689 392 aa8.91□□□□□ -0.98
CCDC30-214ENST00000514642 MKNK2Q9HBH9 465 aa8.91□□□□□ -0.98
CCDC30-214ENST00000514642 PCDH11XQ9BZA7 1347 aa8.91□□□□□ -0.98
CCDC30-214ENST00000514642 PCDH11YQ9BZA8 1340 aa8.91□□□□□ -0.98
CCDC30-214ENST00000514642 BECN2A8MW95 431 aa8.91□□□□□ -0.98
CCDC30-214ENST00000514642 APBA3O96018 575 aa8.91□□□□□ -0.98
CCDC30-214ENST00000514642 SEC63Q9UGP8 760 aaKnown RBP8.91□□□□□ -0.98
CCDC30-214ENST00000514642 ARHGEF10O15013 1369 aa8.91□□□□□ -0.98
CCDC30-214ENST00000514642 GPR162Q16538 588 aa8.91□□□□□ -0.98
CCDC30-214ENST00000514642 CCDC87Q9NVE4 849 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms