RNA–Protein interactions for RNA: ENST00000514231.1

PDE4D-221, Transcript of phosphodiesterase 4D, humanhuman

TSL 3

Gene PDE4D, Length 733 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-221ENST00000514231 FIGNL2A6NMB9 653 aa11.38□□□□□ -0.59
PDE4D-221ENST00000514231 TRAK2O60296 914 aa11.38□□□□□ -0.59
PDE4D-221ENST00000514231 POLMQ9NP87 494 aaPredicted RBP11.38□□□□□ -0.59
PDE4D-221ENST00000514231 TSGA10IPQ3SY00 556 aa11.37□□□□□ -0.59
PDE4D-221ENST00000514231 CYP2U1Q7Z449 544 aa11.37□□□□□ -0.59
PDE4D-221ENST00000514231 RNF135Q8IUD6 432 aa11.37□□□□□ -0.59
PDE4D-221ENST00000514231 CDCA7Q9BWT1 371 aaPredicted RBP11.37□□□□□ -0.59
PDE4D-221ENST00000514231 OSBPL3Q9H4L5 887 aa11.37□□□□□ -0.59
PDE4D-221ENST00000514231 H3BM21 787 aa11.36□□□□□ -0.59
PDE4D-221ENST00000514231 USP4Q13107 963 aa11.36□□□□□ -0.59
PDE4D-221ENST00000514231 ALG2Q9H553 416 aa11.36□□□□□ -0.59
PDE4D-221ENST00000514231 A0A1W2PRU2 124 aa11.35□□□□□ -0.59
PDE4D-221ENST00000514231 MYCP01106 439 aaPredicted RBP11.35□□□□□ -0.59
PDE4D-221ENST00000514231 RNF144AP50876 292 aaPredicted RBP11.35□□□□□ -0.59
PDE4D-221ENST00000514231 RNF217Q8TC41 542 aa11.35□□□□□ -0.59
PDE4D-221ENST00000514231 DOLKQ9UPQ8 538 aa11.35□□□□□ -0.59
PDE4D-221ENST00000514231 MAP7D1Q3KQU3 841 aa11.34□□□□□ -0.59
PDE4D-221ENST00000514231 GNRH1P01148 92 aa11.33□□□□□ -0.6
PDE4D-221ENST00000514231 GPC1P35052 558 aa11.33□□□□□ -0.6
PDE4D-221ENST00000514231 PTSQ03393 145 aa11.33□□□□□ -0.6
PDE4D-221ENST00000514231 FOXD4L5Q5VV16 416 aaPredicted RBP11.33□□□□□ -0.6
PDE4D-221ENST00000514231 PPFIA3O75145 1194 aa11.32□□□□□ -0.6
PDE4D-221ENST00000514231 VEGFBP49765 207 aa11.32□□□□□ -0.6
PDE4D-221ENST00000514231 IRF7Q92985 503 aa11.32□□□□□ -0.6
PDE4D-221ENST00000514231 SIRT1Q96EB6 747 aa11.32□□□□□ -0.6
PDE4D-221ENST00000514231 CLN3Q13286 438 aa11.31□□□□□ -0.6
PDE4D-221ENST00000514231 LCE2CQ5TA81 110 aa11.31□□□□□ -0.6
PDE4D-221ENST00000514231 MEN1O00255 615 aa11.3□□□□□ -0.6
PDE4D-221ENST00000514231 LYSMD3Q7Z3D4 306 aa11.3□□□□□ -0.6
PDE4D-221ENST00000514231 PLPP7Q8NBV4 271 aa11.3□□□□□ -0.6
PDE4D-221ENST00000514231 NLRP3Q96P20 1036 aa11.3□□□□□ -0.6
PDE4D-221ENST00000514231 SLC35F4A4IF30 521 aa11.29□□□□□ -0.6
PDE4D-221ENST00000514231 WIPF1O43516 503 aa11.29□□□□□ -0.6
PDE4D-221ENST00000514231 FNBP4Q8N3X1 1017 aaPredicted RBP11.29□□□□□ -0.6
PDE4D-221ENST00000514231 CLUAP1Q96AJ1 413 aa11.29□□□□□ -0.6
PDE4D-221ENST00000514231 OXLD1Q5BKU9 147 aa11.28□□□□□ -0.6
PDE4D-221ENST00000514231 NFATC2IPQ8NCF5 419 aa11.28□□□□□ -0.6
PDE4D-221ENST00000514231 ARHGEF10LQ9HCE6 1279 aa11.28□□□□□ -0.6
PDE4D-221ENST00000514231 CCDC155Q8N6L0 562 aa11.27□□□□□ -0.61
PDE4D-221ENST00000514231 GRIP2Q9C0E4 1043 aa11.27□□□□□ -0.61
PDE4D-221ENST00000514231 A6NJR5 290 aa11.26□□□□□ -0.61
PDE4D-221ENST00000514231 POM121CA8CG34 1229 aa11.26□□□□□ -0.61
PDE4D-221ENST00000514231 LZTS3O60299 673 aaPredicted RBP11.26□□□□□ -0.61
PDE4D-221ENST00000514231 VSIG8P0DPA2 414 aa11.26□□□□□ -0.61
PDE4D-221ENST00000514231 XAGE2Q96GT9 111 aa11.26□□□□□ -0.61
PDE4D-221ENST00000514231 ESYT1Q9BSJ8 1104 aa11.26□□□□□ -0.61
PDE4D-221ENST00000514231 PIK3CDO00329 1044 aa11.25□□□□□ -0.61
PDE4D-221ENST00000514231 ESCO1Q5FWF5 840 aa11.25□□□□□ -0.61
PDE4D-221ENST00000514231 HDGFL1Q5TGJ6 251 aa11.25□□□□□ -0.61
PDE4D-221ENST00000514231 PRICKLE2Q7Z3G6 844 aa11.25□□□□□ -0.61
PDE4D-221ENST00000514231 PROSER2Q86WR7 435 aaPredicted RBP11.25□□□□□ -0.61
PDE4D-221ENST00000514231 CNKSR1Q969H4 720 aa11.25□□□□□ -0.61
PDE4D-221ENST00000514231 ERBB4Q15303 1308 aa11.25□□□□□ -0.61
PDE4D-221ENST00000514231 SLC27A3Q5K4L6 730 aa11.24□□□□□ -0.61
PDE4D-221ENST00000514231 ADAMTS19Q8TE59 1207 aa11.24□□□□□ -0.61
PDE4D-221ENST00000514231 HRH3Q9Y5N1 445 aa11.24□□□□□ -0.61
PDE4D-221ENST00000514231 SENP3-EIF4A1A0A087X0R7 540 aa11.23□□□□□ -0.61
PDE4D-221ENST00000514231 IL2RAP01589 272 aa11.23□□□□□ -0.61
PDE4D-221ENST00000514231 SKIP12755 728 aa11.23□□□□□ -0.61
PDE4D-221ENST00000514231 GMPRP36959 345 aa11.23□□□□□ -0.61
PDE4D-221ENST00000514231 CENPCQ03188 943 aa11.23□□□□□ -0.61
PDE4D-221ENST00000514231 NANOS1Q8WY41 292 aaKnown RBP11.23□□□□□ -0.61
PDE4D-221ENST00000514231 RAB6BQ9NRW1 208 aa11.23□□□□□ -0.61
PDE4D-221ENST00000514231 WDR44Q5JSH3 913 aa11.22□□□□□ -0.61
PDE4D-221ENST00000514231 SPATA31C2B4DYI2 1134 aa11.21□□□□□ -0.61
PDE4D-221ENST00000514231 EML3Q32P44 896 aa11.21□□□□□ -0.61
PDE4D-221ENST00000514231 ITGA6P23229 1130 aa11.2□□□□□ -0.62
PDE4D-221ENST00000514231 POU4F2Q12837 409 aa11.2□□□□□ -0.62
PDE4D-221ENST00000514231 RHOQP17081 205 aa11.19□□□□□ -0.62
PDE4D-221ENST00000514231 INSM1Q01101 510 aaPredicted RBP11.19□□□□□ -0.62
PDE4D-221ENST00000514231 ETNK1Q9HBU6 452 aa11.19□□□□□ -0.62
PDE4D-221ENST00000514231 NBPF10Q6P3W6 841 aaKnown RBP11.18□□□□□ -0.62
PDE4D-221ENST00000514231 NBPF15Q8N660 670 aa11.18□□□□□ -0.62
PDE4D-221ENST00000514231 FHDC1Q9C0D6 1143 aaPredicted RBP11.18□□□□□ -0.62
PDE4D-221ENST00000514231 NOD1Q9Y239 953 aa11.18□□□□□ -0.62
PDE4D-221ENST00000514231 INHAP05111 366 aa11.17□□□□□ -0.62
PDE4D-221ENST00000514231 SCNN1DP51172 638 aa11.17□□□□□ -0.62
PDE4D-221ENST00000514231 ZSCAN10Q96SZ4 725 aaPredicted RBP11.17□□□□□ -0.62
PDE4D-221ENST00000514231 DYRK1BQ9Y463 629 aa11.17□□□□□ -0.62
PDE4D-221ENST00000514231 PCDHGA11Q9Y5H2 935 aa11.17□□□□□ -0.62
PDE4D-221ENST00000514231 WASLO00401 505 aaPredicted RBP11.16□□□□□ -0.62
PDE4D-221ENST00000514231 NCOA4Q13772 614 aa11.16□□□□□ -0.62
PDE4D-221ENST00000514231 TAS1R3Q7RTX0 852 aa11.16□□□□□ -0.62
PDE4D-221ENST00000514231 UCN2Q96RP3 112 aa11.16□□□□□ -0.62
PDE4D-221ENST00000514231 USP17L5A8MUK1 530 aa11.15□□□□□ -0.62
PDE4D-221ENST00000514231 STAU1O95793 577 aaKnown RBP11.15□□□□□ -0.62
PDE4D-221ENST00000514231 GTF2E1P29083 439 aaPredicted RBP11.15□□□□□ -0.62
PDE4D-221ENST00000514231 GDF10P55107 478 aa11.15□□□□□ -0.62
PDE4D-221ENST00000514231 TBC1D9Q6ZT07 1266 aa11.15□□□□□ -0.62
PDE4D-221ENST00000514231 PLEKHM2Q8IWE5 1019 aa11.15□□□□□ -0.62
PDE4D-221ENST00000514231 GPR161Q8N6U8 529 aaKnown RBP11.15□□□□□ -0.62
PDE4D-221ENST00000514231 GLMNQ92990 594 aa11.15□□□□□ -0.62
PDE4D-221ENST00000514231 ATP9BO43861 1147 aa11.14□□□□□ -0.63
PDE4D-221ENST00000514231 SV2AQ7L0J3 742 aa11.14□□□□□ -0.63
PDE4D-221ENST00000514231 VWA5B2Q8N398 1253 aa11.14□□□□□ -0.63
PDE4D-221ENST00000514231 GMCL1Q96IK5 515 aa11.14□□□□□ -0.63
PDE4D-221ENST00000514231 TMEM214Q6NUQ4 689 aaKnown RBP11.13□□□□□ -0.63
PDE4D-221ENST00000514231 DEPDC4Q8N2C3 294 aa11.13□□□□□ -0.63
PDE4D-221ENST00000514231 SLC4A9Q96Q91 983 aa11.13□□□□□ -0.63
PDE4D-221ENST00000514231 TIMMDC1Q9NPL8 285 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms