RNA–Protein interactions for RNA: ENST00000514189.5

PRDM16-208, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRDM16, Length 4,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-208ENST00000514189 BRPF1P55201 1214 aaPredicted RBP15.6■□□□□ 0.09
PRDM16-208ENST00000514189 PRPF40BQ6NWY9 871 aaKnown RBP15.6■□□□□ 0.09
PRDM16-208ENST00000514189 MEIS3Q99687 375 aa15.6■□□□□ 0.09
PRDM16-208ENST00000514189 CFAP43Q8NDM7 1665 aa15.6■□□□□ 0.09
PRDM16-208ENST00000514189 KINO60870 393 aaKnown RBP15.6■□□□□ 0.09
PRDM16-208ENST00000514189 PCMTD1Q96MG8 357 aaPredicted RBP15.6■□□□□ 0.09
PRDM16-208ENST00000514189 CWC22Q9HCG8 908 aaKnown RBP15.6■□□□□ 0.09
PRDM16-208ENST00000514189 USP25Q9UHP3 1055 aa15.6■□□□□ 0.09
PRDM16-208ENST00000514189 WDR33Q9C0J8 1336 aaKnown RBP15.6■□□□□ 0.09
PRDM16-208ENST00000514189 MX1P20591 662 aa15.6■□□□□ 0.09
PRDM16-208ENST00000514189 ME1P48163 572 aa15.6■□□□□ 0.09
PRDM16-208ENST00000514189 FKBP4Q02790 459 aaKnown RBP eCLIP15.6■□□□□ 0.09
PRDM16-208ENST00000514189 PLCH2O75038 1416 aa15.6■□□□□ 0.09
PRDM16-208ENST00000514189 DHX29Q7Z478 1369 aaKnown RBP15.6■□□□□ 0.09
PRDM16-208ENST00000514189 MCM2P49736 904 aa15.6■□□□□ 0.09
PRDM16-208ENST00000514189 STRN4Q9NRL3 753 aa15.6■□□□□ 0.09
PRDM16-208ENST00000514189 CEBPAP49715 358 aaPredicted RBP15.59■□□□□ 0.09
PRDM16-208ENST00000514189 GUCY1B3Q02153 619 aa15.59■□□□□ 0.09
PRDM16-208ENST00000514189 CIZ1Q9ULV3 898 aaPredicted RBP15.59■□□□□ 0.09
PRDM16-208ENST00000514189 ABCC2Q92887 1545 aa15.59■□□□□ 0.09
PRDM16-208ENST00000514189 DHX16O60231 1041 aaKnown RBP15.59■□□□□ 0.09
PRDM16-208ENST00000514189 ZSCAN30Q86W11 494 aa15.59■□□□□ 0.09
PRDM16-208ENST00000514189 AEBP1Q8IUX7 1158 aa15.59■□□□□ 0.09
PRDM16-208ENST00000514189 C8orf58Q8NAV2 365 aa15.59■□□□□ 0.09
PRDM16-208ENST00000514189 PSMA5P28066 241 aa15.59■□□□□ 0.09
PRDM16-208ENST00000514189 SAMD1Q6SPF0 538 aaPredicted RBP15.59■□□□□ 0.09
PRDM16-208ENST00000514189 TNMDQ9H2S6 317 aa15.59■□□□□ 0.09
PRDM16-208ENST00000514189 BAG4O95429 457 aaKnown RBP15.58■□□□□ 0.09
PRDM16-208ENST00000514189 BLOC1S2Q6QNY1 142 aa15.58■□□□□ 0.09
PRDM16-208ENST00000514189 VPS37DQ86XT2 251 aa15.58■□□□□ 0.09
PRDM16-208ENST00000514189 CKAP2LQ8IYA6 745 aa15.58■□□□□ 0.09
PRDM16-208ENST00000514189 ZNF830Q96NB3 372 aaPredicted RBP15.58■□□□□ 0.09
PRDM16-208ENST00000514189 WDR7Q9Y4E6 1490 aa15.58■□□□□ 0.08
PRDM16-208ENST00000514189 HSP90AB2PQ58FF8 381 aa15.58■□□□□ 0.08
PRDM16-208ENST00000514189 MPRIPQ6WCQ1 1025 aa15.58■□□□□ 0.08
PRDM16-208ENST00000514189 PDRG1Q9NUG6 133 aa15.58■□□□□ 0.08
PRDM16-208ENST00000514189 NCKAP5LQ9HCH0 1330 aa15.58■□□□□ 0.08
PRDM16-208ENST00000514189 PTCD1O75127 700 aaKnown RBP15.57■□□□□ 0.08
PRDM16-208ENST00000514189 ZNF692Q9BU19 519 aaPredicted RBP15.57■□□□□ 0.08
PRDM16-208ENST00000514189 MAPK8IP2Q13387 824 aaPredicted RBP15.57■□□□□ 0.08
PRDM16-208ENST00000514189 PHACTR3Q96KR7 559 aa15.57■□□□□ 0.08
PRDM16-208ENST00000514189 STK38Q15208 465 aa15.57■□□□□ 0.08
PRDM16-208ENST00000514189 NINLQ9Y2I6 1382 aa15.56■□□□□ 0.08
PRDM16-208ENST00000514189 NOS1P29475 1434 aa15.56■□□□□ 0.08
PRDM16-208ENST00000514189 KRT85P78386 507 aa15.56■□□□□ 0.08
PRDM16-208ENST00000514189 PLEKHO1Q53GL0 409 aaPredicted RBP15.56■□□□□ 0.08
PRDM16-208ENST00000514189 MNS1Q8NEH6 495 aa15.56■□□□□ 0.08
PRDM16-208ENST00000514189 BTBD11A6QL63 1104 aa15.56■□□□□ 0.08
PRDM16-208ENST00000514189 GOLGA6L1Q8N7Z2 621 aa15.56■□□□□ 0.08
PRDM16-208ENST00000514189 A0A0U1RQG5 324 aaPredicted RBP15.55■□□□□ 0.08
PRDM16-208ENST00000514189 PDCP20941 246 aa15.55■□□□□ 0.08
PRDM16-208ENST00000514189 LRRIQ1Q96JM4 1722 aa15.55■□□□□ 0.08
PRDM16-208ENST00000514189 CCDC192P0DO97 292 aa15.55■□□□□ 0.08
PRDM16-208ENST00000514189 TSR1Q2NL82 804 aaKnown RBP15.55■□□□□ 0.08
PRDM16-208ENST00000514189 PARD3Q8TEW0 1356 aa15.55■□□□□ 0.08
PRDM16-208ENST00000514189 SDSP20132 328 aa15.55■□□□□ 0.08
PRDM16-208ENST00000514189 SPATA32Q96LK8 384 aa15.55■□□□□ 0.08
PRDM16-208ENST00000514189 CCDC82Q8N4S0 544 aa15.54■□□□□ 0.08
PRDM16-208ENST00000514189 BMP2KLQ5H9B9 411 aa15.54■□□□□ 0.08
PRDM16-208ENST00000514189 ATAD2Q6PL18 1390 aa15.54■□□□□ 0.08
PRDM16-208ENST00000514189 G3V3G9 751 aa15.54■□□□□ 0.08
PRDM16-208ENST00000514189 DCAF8Q5TAQ9 597 aa15.54■□□□□ 0.08
PRDM16-208ENST00000514189 PIBF1Q8WXW3 757 aa15.54■□□□□ 0.08
PRDM16-208ENST00000514189 FOXO3O43524 673 aa15.54■□□□□ 0.08
PRDM16-208ENST00000514189 CHD1O14646 1710 aa15.53■□□□□ 0.08
PRDM16-208ENST00000514189 ALDH1L2Q3SY69 923 aa15.53■□□□□ 0.08
PRDM16-208ENST00000514189 ZGPATQ8N5A5 531 aaKnown RBP15.53■□□□□ 0.08
PRDM16-208ENST00000514189 TPM2P07951 284 aa15.53■□□□□ 0.08
PRDM16-208ENST00000514189 RAB11FIP4Q86YS3 637 aa15.53■□□□□ 0.08
PRDM16-208ENST00000514189 FLIIQ13045 1269 aa15.52■□□□□ 0.08
PRDM16-208ENST00000514189 LRRFIP1Q32MZ4 808 aaKnown RBP15.52■□□□□ 0.08
PRDM16-208ENST00000514189 GNAT3A8MTJ3 354 aa15.52■□□□□ 0.08
PRDM16-208ENST00000514189 PROSER2Q86WR7 435 aaPredicted RBP15.52■□□□□ 0.08
PRDM16-208ENST00000514189 OTUD7AQ8TE49 926 aaPredicted RBP15.52■□□□□ 0.08
PRDM16-208ENST00000514189 C14orf93Q9H972 538 aaKnown RBP15.52■□□□□ 0.08
PRDM16-208ENST00000514189 RAB11FIP3O75154 756 aa15.52■□□□□ 0.07
PRDM16-208ENST00000514189 DENND4BO75064 1496 aaPredicted RBP15.52■□□□□ 0.07
PRDM16-208ENST00000514189 ATF3P18847 181 aa15.51■□□□□ 0.07
PRDM16-208ENST00000514189 SAFBQ15424 915 aaKnown RBP eCLIP15.51■□□□□ 0.07
PRDM16-208ENST00000514189 NECAB1Q8N987 351 aa15.51■□□□□ 0.07
PRDM16-208ENST00000514189 ZBTB9Q96C00 473 aa15.51■□□□□ 0.07
PRDM16-208ENST00000514189 MAGI3Q5TCQ9 1506 aa15.51■□□□□ 0.07
PRDM16-208ENST00000514189 HCLS1P14317 486 aaPredicted RBP15.51■□□□□ 0.07
PRDM16-208ENST00000514189 TPM1P09493 284 aa15.51■□□□□ 0.07
PRDM16-208ENST00000514189 PKNOX2Q96KN3 472 aa15.51■□□□□ 0.07
PRDM16-208ENST00000514189 NUP62CLQ9H1M0 184 aa15.51■□□□□ 0.07
PRDM16-208ENST00000514189 PIP4K2AP48426 406 aaPredicted RBP15.51■□□□□ 0.07
PRDM16-208ENST00000514189 NUCB1Q02818 461 aa15.51■□□□□ 0.07
PRDM16-208ENST00000514189 SYCP2Q9BX26 1530 aa15.5■□□□□ 0.07
PRDM16-208ENST00000514189 PI4KAP2A4QPH2 592 aa15.5■□□□□ 0.07
PRDM16-208ENST00000514189 CBX1P83916 185 aa15.5■□□□□ 0.07
PRDM16-208ENST00000514189 PI4KAP1Q8N8J0 262 aa15.5■□□□□ 0.07
PRDM16-208ENST00000514189 KAT6BQ8WYB5 2073 aa15.5■□□□□ 0.07
PRDM16-208ENST00000514189 ERICH2A1L162 156 aa15.5■□□□□ 0.07
PRDM16-208ENST00000514189 TCOF1Q13428 1488 aaKnown RBP15.5■□□□□ 0.07
PRDM16-208ENST00000514189 ITSN2Q9NZM3 1697 aa15.5■□□□□ 0.07
PRDM16-208ENST00000514189 TRAPPC8Q9Y2L5 1435 aa15.5■□□□□ 0.07
PRDM16-208ENST00000514189 CCT2P78371 535 aaKnown RBP15.49■□□□□ 0.07
PRDM16-208ENST00000514189 GIMAP6Q6P9H5 292 aa15.49■□□□□ 0.07
PRDM16-208ENST00000514189 PPP1R42Q7Z4L9 355 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms