RNA–Protein interactions for RNA: ENST00000514121.5

SPOP-219, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 4

Gene SPOP, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-219ENST00000514121 THSD7AQ9UPZ6 1657 aa18.91■□□□□ 0.62
SPOP-219ENST00000514121 MEGF6O75095 1541 aa18.9■□□□□ 0.62
SPOP-219ENST00000514121 FAM196AQ6ZSG2 479 aa18.9■□□□□ 0.62
SPOP-219ENST00000514121 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.9■□□□□ 0.625e-7■□□□□ 10.6
SPOP-219ENST00000514121 FCHSD2O94868 740 aa18.89■□□□□ 0.61
SPOP-219ENST00000514121 AMOTQ4VCS5 1084 aa18.89■□□□□ 0.61
SPOP-219ENST00000514121 KDRP35968 1356 aa18.89■□□□□ 0.61
SPOP-219ENST00000514121 OVOS2A0A0G2JMS6 1433 aa18.89■□□□□ 0.61
SPOP-219ENST00000514121 WDR43Q15061 677 aaKnown RBP eCLIP18.87■□□□□ 0.61
SPOP-219ENST00000514121 CCDC184Q52MB2 194 aa18.87■□□□□ 0.61
SPOP-219ENST00000514121 TNS2Q63HR2 1409 aa18.87■□□□□ 0.61
SPOP-219ENST00000514121 PCDH11XQ9BZA7 1347 aa18.86■□□□□ 0.61
SPOP-219ENST00000514121 PCDH11YQ9BZA8 1340 aa18.86■□□□□ 0.61
SPOP-219ENST00000514121 PRKAR2BP31323 418 aa18.86■□□□□ 0.61
SPOP-219ENST00000514121 RSPH6AQ9H0K4 717 aa18.86■□□□□ 0.61
SPOP-219ENST00000514121 PNNQ9H307 717 aaKnown RBP18.86■□□□□ 0.61
SPOP-219ENST00000514121 MRS2Q9HD23 443 aa18.86■□□□□ 0.61
SPOP-219ENST00000514121 IFNL2Q8IZJ0 200 aa18.85■□□□□ 0.61
SPOP-219ENST00000514121 PARP4Q9UKK3 1724 aaKnown RBP18.85■□□□□ 0.61
SPOP-219ENST00000514121 BRWD3Q6RI45 1802 aa18.84■□□□□ 0.61
SPOP-219ENST00000514121 CYP27B1O15528 508 aa18.84■□□□□ 0.61
SPOP-219ENST00000514121 NEFMP07197 916 aa18.84■□□□□ 0.61
SPOP-219ENST00000514121 ZNF530Q6P9A1 599 aaPredicted RBP18.84■□□□□ 0.61
SPOP-219ENST00000514121 RGPD1P0DJD0 1748 aa18.83■□□□□ 0.61
SPOP-219ENST00000514121 PLEKHG2Q9H7P9 1386 aa18.82■□□□□ 0.6
SPOP-219ENST00000514121 LRRC37A3O60309 1634 aa18.82■□□□□ 0.6
SPOP-219ENST00000514121 PHKG2P15735 406 aa18.82■□□□□ 0.6
SPOP-219ENST00000514121 MTHFSDQ2M296 383 aaKnown RBP18.82■□□□□ 0.6
SPOP-219ENST00000514121 C1orf141Q5JVX7 400 aa18.82■□□□□ 0.6
SPOP-219ENST00000514121 ADAMTS8Q9UP79 889 aa18.82■□□□□ 0.6
SPOP-219ENST00000514121 WNK3Q9BYP7 1800 aa18.81■□□□□ 0.6
SPOP-219ENST00000514121 TRIM37O94972 964 aa18.81■□□□□ 0.6
SPOP-219ENST00000514121 UPF1Q92900 1129 aaKnown RBP eCLIP18.81■□□□□ 0.6
SPOP-219ENST00000514121 ACSBG1Q96GR2 724 aa18.81■□□□□ 0.6
SPOP-219ENST00000514121 PHACTR3Q96KR7 559 aa18.81■□□□□ 0.6
SPOP-219ENST00000514121 HSP90AB1P08238 724 aaKnown RBP18.8■□□□□ 0.6
SPOP-219ENST00000514121 CCDC125Q86Z20 511 aa18.8■□□□□ 0.6
SPOP-219ENST00000514121 GAS2L2Q8NHY3 880 aa18.8■□□□□ 0.6
SPOP-219ENST00000514121 SF3B2Q13435 895 aaKnown RBP18.79■□□□□ 0.6
SPOP-219ENST00000514121 NKX1-1Q15270 411 aaPredicted RBP18.79■□□□□ 0.6
SPOP-219ENST00000514121 AKAP4Q5JQC9 854 aa18.79■□□□□ 0.6
SPOP-219ENST00000514121 PNISRQ8TF01 805 aaKnown RBP18.79■□□□□ 0.6
SPOP-219ENST00000514121 PLEKHF1Q96S99 279 aa18.79■□□□□ 0.6
SPOP-219ENST00000514121 BCL9O00512 1426 aa18.78■□□□□ 0.6
SPOP-219ENST00000514121 SOCS7O14512 581 aa18.78■□□□□ 0.6
SPOP-219ENST00000514121 PRIM1P49642 420 aaKnown RBP18.78■□□□□ 0.6
SPOP-219ENST00000514121 MIER1Q8N108 512 aa18.78■□□□□ 0.6
SPOP-219ENST00000514121 MAPK8IP3Q9UPT6 1336 aa18.77■□□□□ 0.6
SPOP-219ENST00000514121 KCNQ2O43526 872 aa18.77■□□□□ 0.6
SPOP-219ENST00000514121 SYTL4Q96C24 671 aaPredicted RBP18.77■□□□□ 0.6
SPOP-219ENST00000514121 BCL11BQ9C0K0 894 aaPredicted RBP18.77■□□□□ 0.6
SPOP-219ENST00000514121 CCER2I3L3R5 266 aa18.76■□□□□ 0.59
SPOP-219ENST00000514121 MPRIPQ6WCQ1 1025 aa18.76■□□□□ 0.59
SPOP-219ENST00000514121 CCDC146Q8IYE0 955 aa18.76■□□□□ 0.59
SPOP-219ENST00000514121 DCAF5Q96JK2 942 aa18.76■□□□□ 0.59
SPOP-219ENST00000514121 RUNDC1Q96C34 613 aa18.75■□□□□ 0.59
SPOP-219ENST00000514121 GNAT3A8MTJ3 354 aa18.74■□□□□ 0.59
SPOP-219ENST00000514121 APBA3O96018 575 aa18.74■□□□□ 0.59
SPOP-219ENST00000514121 PTF1AQ7RTS3 328 aa18.73■□□□□ 0.59
SPOP-219ENST00000514121 FAM9BQ8IZU0 186 aa18.73■□□□□ 0.59
SPOP-219ENST00000514121 PKD1L3Q7Z443 1732 aa18.73■□□□□ 0.59
SPOP-219ENST00000514121 ERVV-2B6SEH9 535 aa18.72■□□□□ 0.59
SPOP-219ENST00000514121 NFE2L2Q16236 605 aa18.72■□□□□ 0.59
SPOP-219ENST00000514121 RTF1Q92541 710 aaKnown RBP18.72■□□□□ 0.59
SPOP-219ENST00000514121 LGR6Q9HBX8 967 aa18.72■□□□□ 0.59
SPOP-219ENST00000514121 RNMTO43148 476 aaKnown RBP18.71■□□□□ 0.59
SPOP-219ENST00000514121 BAG6P46379 1132 aa18.71■□□□□ 0.59
SPOP-219ENST00000514121 CABP4P57796 275 aa18.71■□□□□ 0.59
SPOP-219ENST00000514121 TMOD3Q9NYL9 352 aa18.7■□□□□ 0.58
SPOP-219ENST00000514121 MAP3K5Q99683 1374 aa18.69■□□□□ 0.58
SPOP-219ENST00000514121 SHANK3Q9BYB0 1731 aa18.69■□□□□ 0.58
SPOP-219ENST00000514121 HTATSF1O43719 755 aaKnown RBP18.69■□□□□ 0.58
SPOP-219ENST00000514121 TMPOP42166 694 aaKnown RBP18.69■□□□□ 0.58
SPOP-219ENST00000514121 RIPK4P57078 832 aa18.69■□□□□ 0.58
SPOP-219ENST00000514121 NEUROD2Q15784 382 aa18.69■□□□□ 0.58
SPOP-219ENST00000514121 IL17REQ8NFR9 667 aa18.69■□□□□ 0.58
SPOP-219ENST00000514121 PIGBQ92521 554 aa18.69■□□□□ 0.58
SPOP-219ENST00000514121 APAF1O14727 1248 aa18.68■□□□□ 0.58
SPOP-219ENST00000514121 EN1Q05925 392 aaPredicted RBP18.68■□□□□ 0.58
SPOP-219ENST00000514121 DEFB132Q7Z7B7 95 aa18.68■□□□□ 0.58
SPOP-219ENST00000514121 NFATC2IPQ8NCF5 419 aa18.68■□□□□ 0.58
SPOP-219ENST00000514121 KAT6BQ8WYB5 2073 aa18.67■□□□□ 0.58
SPOP-219ENST00000514121 PLSCR1O15162 318 aa18.67■□□□□ 0.58
SPOP-219ENST00000514121 RRP7AQ9Y3A4 280 aaKnown RBP18.67■□□□□ 0.58
SPOP-219ENST00000514121 KDM6AO15550 1401 aaPredicted RBP18.66■□□□□ 0.58
SPOP-219ENST00000514121 TEFQ10587 303 aa18.66■□□□□ 0.58
SPOP-219ENST00000514121 DCTN1Q14203 1278 aa18.65■□□□□ 0.58
SPOP-219ENST00000514121 MCM10Q7L590 875 aa18.65■□□□□ 0.58
SPOP-219ENST00000514121 SLC52A2Q9HAB3 445 aa18.65■□□□□ 0.58
SPOP-219ENST00000514121 LMOD3Q0VAK6 560 aa18.64■□□□□ 0.57
SPOP-219ENST00000514121 SMARCC1Q92922 1105 aaPredicted RBP18.64■□□□□ 0.57
SPOP-219ENST00000514121 CAMKK2Q96RR4 588 aa18.64■□□□□ 0.57
SPOP-219ENST00000514121 EZH2Q15910 746 aaKnown RBP18.63■□□□□ 0.57
SPOP-219ENST00000514121 ASAP1Q9ULH1 1129 aa18.62■□□□□ 0.57
SPOP-219ENST00000514121 SBF2Q86WG5 1849 aa18.62■□□□□ 0.57
SPOP-219ENST00000514121 ATG3Q9NT62 314 aa18.61■□□□□ 0.57
SPOP-219ENST00000514121 NHSQ6T4R5 1651 aa18.6■□□□□ 0.57
SPOP-219ENST00000514121 CEMIPQ8WUJ3 1361 aa18.6■□□□□ 0.57
SPOP-219ENST00000514121 SENP3-EIF4A1A0A087X0R7 540 aa18.6■□□□□ 0.57
SPOP-219ENST00000514121 TXNRD1Q16881 649 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms