RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 SSUH2Q9Y2M2 353 aa11.64□□□□□ -0.55
CLDND1-229ENST00000513988 KDM2BQ8NHM5 1336 aa11.63□□□□□ -0.55
CLDND1-229ENST00000513988 KAT6BQ8WYB5 2073 aa11.63□□□□□ -0.55
CLDND1-229ENST00000513988 C10orf71Q711Q0 1435 aa11.63□□□□□ -0.55
CLDND1-229ENST00000513988 TRPM1Q7Z4N2 1603 aa11.63□□□□□ -0.55
CLDND1-229ENST00000513988 TNRC18O15417 2968 aaPredicted RBP11.62□□□□□ -0.55
CLDND1-229ENST00000513988 GCP02774 474 aa11.62□□□□□ -0.55
CLDND1-229ENST00000513988 COL23A1Q86Y22 540 aaPredicted RBP11.62□□□□□ -0.55
CLDND1-229ENST00000513988 ABTB2Q8N961 1025 aa11.62□□□□□ -0.55
CLDND1-229ENST00000513988 WDR17Q8IZU2 1322 aa11.61□□□□□ -0.55
CLDND1-229ENST00000513988 RRAGCQ9HB90 399 aa11.61□□□□□ -0.55
CLDND1-229ENST00000513988 PLEKHG2Q9H7P9 1386 aa11.61□□□□□ -0.55
CLDND1-229ENST00000513988 PIK3C2GO75747 1445 aa11.6□□□□□ -0.55
CLDND1-229ENST00000513988 PIK3C2AO00443 1686 aa11.6□□□□□ -0.55
CLDND1-229ENST00000513988 KCNQ4P56696 695 aa11.6□□□□□ -0.55
CLDND1-229ENST00000513988 KCPQ6ZWJ8 1503 aa11.6□□□□□ -0.55
CLDND1-229ENST00000513988 FXR2P51116 673 aaKnown RBP eCLIP11.59□□□□□ -0.55
CLDND1-229ENST00000513988 LBX1P52954 281 aa11.59□□□□□ -0.55
CLDND1-229ENST00000513988 ARHGAP27Q6ZUM4 889 aa11.59□□□□□ -0.55
CLDND1-229ENST00000513988 MINK1Q8N4C8 1332 aaPredicted RBP11.59□□□□□ -0.55
CLDND1-229ENST00000513988 PXDNLA1KZ92 1463 aa11.58□□□□□ -0.56
CLDND1-229ENST00000513988 NLRP13Q86W25 1043 aa11.58□□□□□ -0.56
CLDND1-229ENST00000513988 CARD10Q9BWT7 1032 aa11.58□□□□□ -0.56
CLDND1-229ENST00000513988 MKRN1Q9UHC7 482 aaKnown RBP11.58□□□□□ -0.56
CLDND1-229ENST00000513988 CLEC11AQ9Y240 323 aa11.58□□□□□ -0.56
CLDND1-229ENST00000513988 TNRC6CQ9HCJ0 1690 aaKnown RBP11.58□□□□□ -0.56
CLDND1-229ENST00000513988 ITSN1Q15811 1721 aa11.57□□□□□ -0.56
CLDND1-229ENST00000513988 WASLO00401 505 aaPredicted RBP11.57□□□□□ -0.56
CLDND1-229ENST00000513988 CSB-PGBD3P0DP91 1061 aa11.57□□□□□ -0.56
CLDND1-229ENST00000513988 RGL3Q3MIN7 710 aa11.57□□□□□ -0.56
CLDND1-229ENST00000513988 C9orf131Q5VYM1 1079 aa11.57□□□□□ -0.56
CLDND1-229ENST00000513988 CFAP44Q96MT7 982 aa11.57□□□□□ -0.56
CLDND1-229ENST00000513988 ABCC6O95255 1503 aa11.56□□□□□ -0.56
CLDND1-229ENST00000513988 BCS1LQ9Y276 419 aa11.55□□□□□ -0.56
CLDND1-229ENST00000513988 C14orf93Q9H972 538 aaKnown RBP11.54□□□□□ -0.56
CLDND1-229ENST00000513988 PKD1L3Q7Z443 1732 aa11.54□□□□□ -0.56
CLDND1-229ENST00000513988 CCDC7Q96M83 1385 aa11.54□□□□□ -0.56
CLDND1-229ENST00000513988 PPIP5K1Q6PFW1 1433 aa11.53□□□□□ -0.56
CLDND1-229ENST00000513988 NUDT16Q96DE0 195 aaKnown RBP11.53□□□□□ -0.56
CLDND1-229ENST00000513988 CCNL1Q9UK58 526 aaPredicted RBP11.53□□□□□ -0.56
CLDND1-229ENST00000513988 AXIN2Q9Y2T1 843 aa11.53□□□□□ -0.56
CLDND1-229ENST00000513988 ACEP12821 1306 aa11.53□□□□□ -0.56
CLDND1-229ENST00000513988 CFAP70Q5T0N1 1121 aa11.52□□□□□ -0.57
CLDND1-229ENST00000513988 FLAD1Q8NFF5 587 aa11.52□□□□□ -0.57
CLDND1-229ENST00000513988 SPDYE1Q8NFV5 336 aaPredicted RBP11.52□□□□□ -0.57
CLDND1-229ENST00000513988 CREBZFQ9NS37 354 aa11.52□□□□□ -0.57
CLDND1-229ENST00000513988 POLR3AO14802 1390 aaPredicted RBP11.52□□□□□ -0.57
CLDND1-229ENST00000513988 HSPA8P11142 646 aaKnown RBP11.51□□□□□ -0.57
CLDND1-229ENST00000513988 COL18A1P39060 1754 aa11.51□□□□□ -0.57
CLDND1-229ENST00000513988 WBP1LQ9NX94 342 aa11.5□□□□□ -0.57
CLDND1-229ENST00000513988 RNF181Q9P0P0 153 aa11.5□□□□□ -0.57
CLDND1-229ENST00000513988 CNTNAP1P78357 1384 aa11.5□□□□□ -0.57
CLDND1-229ENST00000513988 LY75O60449 1722 aa11.49□□□□□ -0.57
CLDND1-229ENST00000513988 FCHSD2O94868 740 aa11.49□□□□□ -0.57
CLDND1-229ENST00000513988 VEGFAP15692 232 aaPredicted RBP11.49□□□□□ -0.57
CLDND1-229ENST00000513988 PRPF38BQ5VTL8 546 aaKnown RBP11.49□□□□□ -0.57
CLDND1-229ENST00000513988 SYTL4Q96C24 671 aaPredicted RBP11.49□□□□□ -0.57
CLDND1-229ENST00000513988 TRAK1Q9UPV9 953 aa11.49□□□□□ -0.57
CLDND1-229ENST00000513988 ITGAEP38570 1179 aa11.48□□□□□ -0.57
CLDND1-229ENST00000513988 SPATA31E1Q6ZUB1 1445 aa11.48□□□□□ -0.57
CLDND1-229ENST00000513988 CPSF1Q10570 1443 aaKnown RBP11.47□□□□□ -0.57
CLDND1-229ENST00000513988 RGPD5Q99666 1765 aa11.46□□□□□ -0.57
CLDND1-229ENST00000513988 SLIT3O75094 1523 aa11.46□□□□□ -0.57
CLDND1-229ENST00000513988 A0A0G2JLW4 131 aa11.46□□□□□ -0.57
CLDND1-229ENST00000513988 IL2RBP14784 551 aa11.46□□□□□ -0.57
CLDND1-229ENST00000513988 NLRP6P59044 892 aa11.46□□□□□ -0.57
CLDND1-229ENST00000513988 N4BP2Q86UW6 1770 aaPredicted RBP11.46□□□□□ -0.58
CLDND1-229ENST00000513988 PRIM1P49642 420 aaKnown RBP11.45□□□□□ -0.58
CLDND1-229ENST00000513988 VEGFBP49765 207 aa11.45□□□□□ -0.58
CLDND1-229ENST00000513988 TGFB2P61812 414 aa11.45□□□□□ -0.58
CLDND1-229ENST00000513988 USP54Q70EL1 1684 aa11.45□□□□□ -0.58
CLDND1-229ENST00000513988 PLEKHG3A1L390 1219 aa11.44□□□□□ -0.58
CLDND1-229ENST00000513988 PRKAR2AP13861 404 aaKnown RBP11.44□□□□□ -0.58
CLDND1-229ENST00000513988 CCDC61Q9Y6R9 512 aa11.44□□□□□ -0.58
CLDND1-229ENST00000513988 KIAA1551Q9HCM1 1747 aa11.43□□□□□ -0.58
CLDND1-229ENST00000513988 QRICH2Q9H0J4 1663 aa11.43□□□□□ -0.58
CLDND1-229ENST00000513988 HMGB2P26583 209 aaKnown RBP11.43□□□□□ -0.58
CLDND1-229ENST00000513988 DDX54Q8TDD1 881 aaKnown RBP11.43□□□□□ -0.58
CLDND1-229ENST00000513988 C5P01031 1676 aa11.43□□□□□ -0.58
CLDND1-229ENST00000513988 ANKRD36BQ8N2N9 1353 aa11.42□□□□□ -0.58
CLDND1-229ENST00000513988 HAX1O00165 279 aa11.42□□□□□ -0.58
CLDND1-229ENST00000513988 SMIM5Q71RC9 77 aa11.42□□□□□ -0.58
CLDND1-229ENST00000513988 ARHGEF25Q86VW2 580 aa11.42□□□□□ -0.58
CLDND1-229ENST00000513988 NLRP2Q9NX02 1062 aa11.42□□□□□ -0.58
CLDND1-229ENST00000513988 VIRMAQ69YN4 1812 aaKnown RBP11.42□□□□□ -0.58
CLDND1-229ENST00000513988 KIF13BQ9NQT8 1826 aa11.42□□□□□ -0.58
CLDND1-229ENST00000513988 USP47Q96K76 1375 aa11.41□□□□□ -0.58
CLDND1-229ENST00000513988 ERBB3P21860 1342 aa11.41□□□□□ -0.58
CLDND1-229ENST00000513988 ZC3H4Q9UPT8 1303 aaKnown RBP11.41□□□□□ -0.58
CLDND1-229ENST00000513988 GLTPD2A6NH11 291 aa11.41□□□□□ -0.58
CLDND1-229ENST00000513988 PHF14O94880 888 aa11.41□□□□□ -0.58
CLDND1-229ENST00000513988 MAP2K1Q02750 393 aaPredicted RBP11.41□□□□□ -0.58
CLDND1-229ENST00000513988 AK7Q96M32 723 aa11.41□□□□□ -0.58
CLDND1-229ENST00000513988 CDK19Q9BWU1 502 aa11.41□□□□□ -0.58
CLDND1-229ENST00000513988 ARFGEF1Q9Y6D6 1849 aa11.41□□□□□ -0.58
CLDND1-229ENST00000513988 NSD2O96028 1365 aa11.41□□□□□ -0.58
CLDND1-229ENST00000513988 DPEP1P16444 411 aa11.4□□□□□ -0.58
CLDND1-229ENST00000513988 CHADLQ6NUI6 762 aa11.4□□□□□ -0.58
CLDND1-229ENST00000513988 DOT1LQ8TEK3 1739 aa11.4□□□□□ -0.58
CLDND1-229ENST00000513988 ADGRB1O14514 1584 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms