RNA–Protein interactions for RNA: ENST00000513861.5

PACRGL-229, Transcript of parkin coregulated like, humanhuman

TSL 4

Gene PACRGL, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-229ENST00000513861 KIF24Q5T7B8 1368 aa28.55■■■□□ 2.16
PACRGL-229ENST00000513861 HSP90AB2PQ58FF8 381 aa28.54■■■□□ 2.16
PACRGL-229ENST00000513861 USHBP1Q8N6Y0 703 aa28.54■■■□□ 2.16
PACRGL-229ENST00000513861 ZBTB7AO95365 584 aa28.53■■■□□ 2.16
PACRGL-229ENST00000513861 CGNL1Q0VF96 1302 aa28.5■■■□□ 2.15
PACRGL-229ENST00000513861 CCER1Q8TC90 406 aaPredicted RBP28.5■■■□□ 2.15
PACRGL-229ENST00000513861 RAPGEF4Q8WZA2 1011 aa28.5■■■□□ 2.15
PACRGL-229ENST00000513861 SYTL4Q96C24 671 aaPredicted RBP28.5■■■□□ 2.15
PACRGL-229ENST00000513861 PRIM1P49642 420 aaKnown RBP28.49■■■□□ 2.15
PACRGL-229ENST00000513861 POLR3GLQ9BT43 218 aa28.49■■■□□ 2.15
PACRGL-229ENST00000513861 LRRC4BQ9NT99 713 aa28.49■■■□□ 2.15
PACRGL-229ENST00000513861 EMILIN1Q9Y6C2 1016 aa28.49■■■□□ 2.15
PACRGL-229ENST00000513861 ANKRD26Q9UPS8 1709 aa28.47■■■□□ 2.15
PACRGL-229ENST00000513861 TATP17735 454 aaPredicted RBP28.47■■■□□ 2.15
PACRGL-229ENST00000513861 EIF4G2P78344 907 aaKnown RBP eCLIP28.47■■■□□ 2.15
PACRGL-229ENST00000513861 ATF5Q9Y2D1 282 aaPredicted RBP28.47■■■□□ 2.15
PACRGL-229ENST00000513861 PTGER2P43116 358 aa28.46■■■□□ 2.15
PACRGL-229ENST00000513861 NSD2O96028 1365 aa28.46■■■□□ 2.15
PACRGL-229ENST00000513861 ZNF827Q17R98 1081 aa28.45■■■□□ 2.14
PACRGL-229ENST00000513861 SLC27A3Q5K4L6 730 aa28.45■■■□□ 2.14
PACRGL-229ENST00000513861 HSPA5P11021 654 aaKnown RBP28.44■■■□□ 2.14
PACRGL-229ENST00000513861 MTFR1LQ9H019 292 aa28.44■■■□□ 2.14
PACRGL-229ENST00000513861 LY75O60449 1722 aa28.43■■■□□ 2.14
PACRGL-229ENST00000513861 MAP2P11137 1827 aaKnown RBP28.43■■■□□ 2.14
PACRGL-229ENST00000513861 PPM1GO15355 546 aaPredicted RBP28.43■■■□□ 2.14
PACRGL-229ENST00000513861 PCDH11XQ9BZA7 1347 aa28.41■■■□□ 2.14
PACRGL-229ENST00000513861 PCDH11YQ9BZA8 1340 aa28.41■■■□□ 2.14
PACRGL-229ENST00000513861 AKT1S1Q96B36 256 aa28.4■■■□□ 2.14
PACRGL-229ENST00000513861 QSER1Q2KHR3 1735 aa28.4■■■□□ 2.14
PACRGL-229ENST00000513861 WASHC2AQ641Q2 1341 aa28.39■■■□□ 2.13
PACRGL-229ENST00000513861 NCAPD2Q15021 1401 aa28.38■■■□□ 2.13
PACRGL-229ENST00000513861 KCNQ4P56696 695 aa28.38■■■□□ 2.13
PACRGL-229ENST00000513861 PKD1L3Q7Z443 1732 aa28.38■■■□□ 2.13
PACRGL-229ENST00000513861 SGIP1Q9BQI5 828 aa28.37■■■□□ 2.13
PACRGL-229ENST00000513861 DCAF8L1A6NGE4 600 aa28.36■■■□□ 2.13
PACRGL-229ENST00000513861 POLKQ9UBT6 870 aa28.36■■■□□ 2.13
PACRGL-229ENST00000513861 TUBGCP6Q96RT7 1819 aa28.35■■■□□ 2.13
PACRGL-229ENST00000513861 CYP27B1O15528 508 aa28.34■■■□□ 2.13
PACRGL-229ENST00000513861 CCNL1Q9UK58 526 aaPredicted RBP28.34■■■□□ 2.13
PACRGL-229ENST00000513861 PANK3Q9H999 370 aa28.33■■■□□ 2.13
PACRGL-229ENST00000513861 TNNT2P45379 298 aaPredicted RBP28.32■■■□□ 2.12
PACRGL-229ENST00000513861 EYA1Q99502 592 aa28.32■■■□□ 2.12
PACRGL-229ENST00000513861 FHDC1Q9C0D6 1143 aaPredicted RBP28.32■■■□□ 2.12
PACRGL-229ENST00000513861 TFCP2L1Q9NZI6 479 aa28.32■■■□□ 2.12
PACRGL-229ENST00000513861 TOGARAM1Q9Y4F4 1720 aa28.32■■■□□ 2.12
PACRGL-229ENST00000513861 PNPLA7Q6ZV29 1317 aa28.31■■■□□ 2.12
PACRGL-229ENST00000513861 SLC16A10Q8TF71 515 aa28.3■■■□□ 2.12
PACRGL-229ENST00000513861 ITGB4P16144 1822 aa28.29■■■□□ 2.12
PACRGL-229ENST00000513861 ARXQ96QS3 562 aa28.29■■■□□ 2.12
PACRGL-229ENST00000513861 SYT17Q9BSW7 474 aa28.29■■■□□ 2.12
PACRGL-229ENST00000513861 SPG7Q9UQ90 795 aa28.29■■■□□ 2.12
PACRGL-229ENST00000513861 MPRIPQ6WCQ1 1025 aa28.28■■■□□ 2.12
PACRGL-229ENST00000513861 C5P01031 1676 aa28.26■■■□□ 2.12
PACRGL-229ENST00000513861 YY1P25490 414 aa28.26■■■□□ 2.11
PACRGL-229ENST00000513861 EIF4A2Q14240 407 aaKnown RBP28.26■■■□□ 2.11
PACRGL-229ENST00000513861 COL24A1Q17RW2 1714 aa28.26■■■□□ 2.11
PACRGL-229ENST00000513861 PALLDQ8WX93 1383 aa28.25■■■□□ 2.11
PACRGL-229ENST00000513861 NKX1-1Q15270 411 aaPredicted RBP28.24■■■□□ 2.11
PACRGL-229ENST00000513861 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.24■■■□□ 2.119e-6■□□□□ 9.4
PACRGL-229ENST00000513861 TAF1LQ8IZX4 1826 aa28.22■■■□□ 2.11
PACRGL-229ENST00000513861 MAP3K5Q99683 1374 aa28.22■■■□□ 2.11
PACRGL-229ENST00000513861 POLD1P28340 1107 aa28.21■■■□□ 2.11
PACRGL-229ENST00000513861 SMARCC1Q92922 1105 aaPredicted RBP28.2■■■□□ 2.1
PACRGL-229ENST00000513861 HMGB2P26583 209 aaKnown RBP28.19■■■□□ 2.1
PACRGL-229ENST00000513861 MORC1Q86VD1 984 aa28.19■■■□□ 2.1
PACRGL-229ENST00000513861 PIGBQ92521 554 aa28.19■■■□□ 2.1
PACRGL-229ENST00000513861 IFNL2Q8IZJ0 200 aa28.18■■■□□ 2.1
PACRGL-229ENST00000513861 IGSF1Q8N6C5 1336 aa28.18■■■□□ 2.1
PACRGL-229ENST00000513861 PLEKHG2Q9H7P9 1386 aa28.17■■■□□ 2.1
PACRGL-229ENST00000513861 MSH5O43196 834 aa28.17■■■□□ 2.1
PACRGL-229ENST00000513861 PHKG2P15735 406 aa28.17■■■□□ 2.1
PACRGL-229ENST00000513861 COL23A1Q86Y22 540 aaPredicted RBP28.17■■■□□ 2.1
PACRGL-229ENST00000513861 KNSTRNQ9Y448 316 aa28.17■■■□□ 2.1
PACRGL-229ENST00000513861 C4BP0C0L5 1744 aa28.15■■■□□ 2.1
PACRGL-229ENST00000513861 KLHL34Q8N239 644 aa28.14■■■□□ 2.1
PACRGL-229ENST00000513861 TMOD3Q9NYL9 352 aa28.14■■■□□ 2.1
PACRGL-229ENST00000513861 KIF7Q2M1P5 1343 aa28.13■■■□□ 2.09
PACRGL-229ENST00000513861 FLAD1Q8NFF5 587 aa28.11■■■□□ 2.09
PACRGL-229ENST00000513861 AK7Q96M32 723 aa28.09■■■□□ 2.09
PACRGL-229ENST00000513861 LOC102724428A0A0B4J2F2 783 aa28.08■■■□□ 2.09
PACRGL-229ENST00000513861 SIK1P57059 783 aa28.08■■■□□ 2.09
PACRGL-229ENST00000513861 AMER1Q5JTC6 1135 aaPredicted RBP28.08■■■□□ 2.09
PACRGL-229ENST00000513861 ASAP1Q9ULH1 1129 aa28.08■■■□□ 2.09
PACRGL-229ENST00000513861 UBR3Q6ZT12 1888 aa28.07■■■□□ 2.08
PACRGL-229ENST00000513861 PLEKHO1Q53GL0 409 aaPredicted RBP28.07■■■□□ 2.08
PACRGL-229ENST00000513861 MSL1Q68DK7 614 aa28.07■■■□□ 2.08
PACRGL-229ENST00000513861 CHD4Q14839 1912 aa28.04■■■□□ 2.08
PACRGL-229ENST00000513861 HSP90AB1P08238 724 aaKnown RBP28.04■■■□□ 2.08
PACRGL-229ENST00000513861 AMOTQ4VCS5 1084 aa28.04■■■□□ 2.08
PACRGL-229ENST00000513861 AEBP1Q8IUX7 1158 aa28.04■■■□□ 2.08
PACRGL-229ENST00000513861 LINC00116Q8NCU8 138 aa28.04■■■□□ 2.08
PACRGL-229ENST00000513861 DCAF5Q96JK2 942 aa28.04■■■□□ 2.08
PACRGL-229ENST00000513861 ATG3Q9NT62 314 aa28.04■■■□□ 2.08
PACRGL-229ENST00000513861 ERVV-2B6SEH9 535 aa28.03■■■□□ 2.08
PACRGL-229ENST00000513861 GPR162Q16538 588 aa28.03■■■□□ 2.08
PACRGL-229ENST00000513861 ZNF530Q6P9A1 599 aaPredicted RBP28.03■■■□□ 2.08
PACRGL-229ENST00000513861 AMIGO3Q86WK7 504 aa28.03■■■□□ 2.08
PACRGL-229ENST00000513861 NLGN2Q8NFZ4 835 aa28.03■■■□□ 2.08
PACRGL-229ENST00000513861 UTRNP46939 3433 aa28.02■■■□□ 2.08
PACRGL-229ENST00000513861 ATP6V1AP38606 617 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms