RNA–Protein interactions for RNA: ENST00000513756.5

PTPN20-229, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-229ENST00000513756 HDGFL2Q7Z4V5 671 aaPredicted RBP17.22■□□□□ 0.35
PTPN20-229ENST00000513756 ZNF526Q8TF50 670 aaPredicted RBP17.22■□□□□ 0.35
PTPN20-229ENST00000513756 IP6K1Q92551 441 aa17.22■□□□□ 0.35
PTPN20-229ENST00000513756 FAM208AQ9UK61 1670 aaKnown RBP17.21■□□□□ 0.35
PTPN20-229ENST00000513756 ADCY9O60503 1353 aa17.21■□□□□ 0.35
PTPN20-229ENST00000513756 ROCK2O75116 1388 aaKnown RBP17.21■□□□□ 0.35
PTPN20-229ENST00000513756 USP47Q96K76 1375 aa17.21■□□□□ 0.35
PTPN20-229ENST00000513756 MSL1Q68DK7 614 aa17.21■□□□□ 0.35
PTPN20-229ENST00000513756 FLAD1Q8NFF5 587 aa17.21■□□□□ 0.35
PTPN20-229ENST00000513756 NSD2O96028 1365 aa17.2■□□□□ 0.34
PTPN20-229ENST00000513756 SBNO2Q9Y2G9 1366 aa17.2■□□□□ 0.34
PTPN20-229ENST00000513756 ZCRB1Q8TBF4 217 aaKnown RBP17.2■□□□□ 0.34
PTPN20-229ENST00000513756 L3MBTL2Q969R5 705 aa17.2■□□□□ 0.34
PTPN20-229ENST00000513756 LTV1Q96GA3 475 aaPredicted RBP17.2■□□□□ 0.34
PTPN20-229ENST00000513756 DOT1LQ8TEK3 1739 aa17.19■□□□□ 0.34
PTPN20-229ENST00000513756 TMC1Q8TDI8 760 aa17.19■□□□□ 0.34
PTPN20-229ENST00000513756 EDC4Q6P2E9 1401 aaKnown RBP17.19■□□□□ 0.34
PTPN20-229ENST00000513756 TERF2IPQ9NYB0 399 aa17.17■□□□□ 0.34
PTPN20-229ENST00000513756 APLP1P51693 650 aa17.16■□□□□ 0.34
PTPN20-229ENST00000513756 CD163L1Q9NR16 1453 aa17.16■□□□□ 0.34
PTPN20-229ENST00000513756 SLC12A5Q9H2X9 1139 aa17.14■□□□□ 0.33
PTPN20-229ENST00000513756 CGNL1Q0VF96 1302 aa17.14■□□□□ 0.33
PTPN20-229ENST00000513756 KIF3CO14782 793 aa17.13■□□□□ 0.33
PTPN20-229ENST00000513756 AMPHP49418 695 aa17.13■□□□□ 0.33
PTPN20-229ENST00000513756 IGSF1Q8N6C5 1336 aa17.13■□□□□ 0.33
PTPN20-229ENST00000513756 HOXC9P31274 260 aa17.12■□□□□ 0.33
PTPN20-229ENST00000513756 C5P01031 1676 aa17.12■□□□□ 0.33
PTPN20-229ENST00000513756 COG3Q96JB2 828 aa17.11■□□□□ 0.33
PTPN20-229ENST00000513756 AK7Q96M32 723 aa17.1■□□□□ 0.33
PTPN20-229ENST00000513756 MAP3K19Q56UN5 1328 aa17.1■□□□□ 0.33
PTPN20-229ENST00000513756 MEGF6O75095 1541 aa17.1■□□□□ 0.33
PTPN20-229ENST00000513756 RAPGEF4Q8WZA2 1011 aa17.09■□□□□ 0.33
PTPN20-229ENST00000513756 PUS7Q96PZ0 661 aaKnown RBP17.09■□□□□ 0.33
PTPN20-229ENST00000513756 A0A1W2PP64 1363 aa17.09■□□□□ 0.33
PTPN20-229ENST00000513756 PALLDQ8WX93 1383 aa17.09■□□□□ 0.33
PTPN20-229ENST00000513756 NSD3Q9BZ95 1437 aa17.09■□□□□ 0.33
PTPN20-229ENST00000513756 TOMM70O94826 608 aa17.08■□□□□ 0.32
PTPN20-229ENST00000513756 SMARCC1Q92922 1105 aaPredicted RBP17.08■□□□□ 0.32
PTPN20-229ENST00000513756 TATP17735 454 aaPredicted RBP17.07■□□□□ 0.32
PTPN20-229ENST00000513756 DNAJC5GQ8N7S2 189 aa17.07■□□□□ 0.32
PTPN20-229ENST00000513756 WWC3Q9ULE0 1092 aa17.07■□□□□ 0.32
PTPN20-229ENST00000513756 TAF1LQ8IZX4 1826 aa17.07■□□□□ 0.32
PTPN20-229ENST00000513756 RTL1A6NKG5 1358 aa17.06■□□□□ 0.32
PTPN20-229ENST00000513756 PCDH11XQ9BZA7 1347 aa17.06■□□□□ 0.32
PTPN20-229ENST00000513756 PCDH11YQ9BZA8 1340 aa17.06■□□□□ 0.32
PTPN20-229ENST00000513756 NBPF6Q5VWK0 638 aa17.06■□□□□ 0.32
PTPN20-229ENST00000513756 MPRIPQ6WCQ1 1025 aa17.06■□□□□ 0.32
PTPN20-229ENST00000513756 NBPF4Q96M43 638 aa17.06■□□□□ 0.32
PTPN20-229ENST00000513756 RGPD2P0DJD1 1756 aa17.06■□□□□ 0.32
PTPN20-229ENST00000513756 SMG6Q86US8 1419 aaKnown RBP17.05■□□□□ 0.32
PTPN20-229ENST00000513756 C4BP0C0L5 1744 aa17.05■□□□□ 0.32
PTPN20-229ENST00000513756 PHF14O94880 888 aa17.05■□□□□ 0.32
PTPN20-229ENST00000513756 CARD11Q9BXL7 1154 aa17.05■□□□□ 0.32
PTPN20-229ENST00000513756 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.04■□□□□ 0.32
PTPN20-229ENST00000513756 SSFA2P28290 1259 aa17.04■□□□□ 0.32
PTPN20-229ENST00000513756 NEUROD1Q13562 356 aa17.03■□□□□ 0.32
PTPN20-229ENST00000513756 USHBP1Q8N6Y0 703 aa17.03■□□□□ 0.32
PTPN20-229ENST00000513756 SIN3AQ96ST3 1273 aa17.03■□□□□ 0.32
PTPN20-229ENST00000513756 CICQ96RK0 1608 aaPredicted RBP17.03■□□□□ 0.32
PTPN20-229ENST00000513756 FBLN1P23142 703 aa17.02■□□□□ 0.32
PTPN20-229ENST00000513756 AMIGO3Q86WK7 504 aa17.01■□□□□ 0.31
PTPN20-229ENST00000513756 UBR3Q6ZT12 1888 aa17.01■□□□□ 0.31
PTPN20-229ENST00000513756 TGFB2P61812 414 aa17■□□□□ 0.31
PTPN20-229ENST00000513756 RRS1Q15050 365 aaKnown RBP16.99■□□□□ 0.31
PTPN20-229ENST00000513756 C16orf71Q8IYS4 520 aaPredicted RBP16.99■□□□□ 0.31
PTPN20-229ENST00000513756 RBM46Q8TBY0 533 aaKnown RBP16.99■□□□□ 0.31
PTPN20-229ENST00000513756 TOGARAM1Q9Y4F4 1720 aa16.99■□□□□ 0.31
PTPN20-229ENST00000513756 SLC24A1O60721 1099 aa16.98■□□□□ 0.31
PTPN20-229ENST00000513756 BCS1LQ9Y276 419 aa16.98■□□□□ 0.31
PTPN20-229ENST00000513756 LOC102724428A0A0B4J2F2 783 aa16.97■□□□□ 0.31
PTPN20-229ENST00000513756 CYP27B1O15528 508 aa16.97■□□□□ 0.31
PTPN20-229ENST00000513756 MMP10P09238 476 aa16.97■□□□□ 0.31
PTPN20-229ENST00000513756 SIK1P57059 783 aa16.97■□□□□ 0.31
PTPN20-229ENST00000513756 ARHGAP27Q6ZUM4 889 aa16.97■□□□□ 0.31
PTPN20-229ENST00000513756 SMIM5Q71RC9 77 aa16.97■□□□□ 0.31
PTPN20-229ENST00000513756 PIGBQ92521 554 aa16.97■□□□□ 0.31
PTPN20-229ENST00000513756 KLRG1Q96E93 195 aa16.97■□□□□ 0.31
PTPN20-229ENST00000513756 ITGB4P16144 1822 aa16.96■□□□□ 0.31
PTPN20-229ENST00000513756 GNPATO15228 680 aa16.96■□□□□ 0.31
PTPN20-229ENST00000513756 FSTL1Q12841 308 aa16.96■□□□□ 0.31
PTPN20-229ENST00000513756 LINC00116Q8NCU8 138 aa16.96■□□□□ 0.31
PTPN20-229ENST00000513756 NMRK2Q9NPI5 230 aa16.96■□□□□ 0.31
PTPN20-229ENST00000513756 INSRP06213 1382 aa16.96■□□□□ 0.31
PTPN20-229ENST00000513756 WDR90Q96KV7 1748 aa16.96■□□□□ 0.3
PTPN20-229ENST00000513756 PXDNLA1KZ92 1463 aa16.95■□□□□ 0.3
PTPN20-229ENST00000513756 COL13A1Q5TAT6 717 aaPredicted RBP16.95■□□□□ 0.3
PTPN20-229ENST00000513756 JMYQ8N9B5 988 aa16.95■□□□□ 0.3
PTPN20-229ENST00000513756 A0A0G2JLW4 131 aa16.94■□□□□ 0.3
PTPN20-229ENST00000513756 NKX1-1Q15270 411 aaPredicted RBP16.94■□□□□ 0.3
PTPN20-229ENST00000513756 KIF13BQ9NQT8 1826 aa16.93■□□□□ 0.3
PTPN20-229ENST00000513756 PLEKHG2Q9H7P9 1386 aa16.93■□□□□ 0.3
PTPN20-229ENST00000513756 CAPN15O75808 1086 aa16.93■□□□□ 0.3
PTPN20-229ENST00000513756 HSP90AB2PQ58FF8 381 aa16.93■□□□□ 0.3
PTPN20-229ENST00000513756 NLGN1Q8N2Q7 840 aa16.93■□□□□ 0.3
PTPN20-229ENST00000513756 CCDC87Q9NVE4 849 aa16.93■□□□□ 0.3
PTPN20-229ENST00000513756 TMOD3Q9NYL9 352 aa16.93■□□□□ 0.3
PTPN20-229ENST00000513756 SPG7Q9UQ90 795 aa16.93■□□□□ 0.3
PTPN20-229ENST00000513756 FLT4P35916 1363 aa16.92■□□□□ 0.3
PTPN20-229ENST00000513756 KIF24Q5T7B8 1368 aa16.92■□□□□ 0.3
PTPN20-229ENST00000513756 FYB1O15117 783 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms