RNA–Protein interactions for RNA: ENST00000513666.5

CAST-239, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 1,539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-239ENST00000513666 ZNF692Q9BU19 519 aaPredicted RBP13.03□□□□□ -0.32
CAST-239ENST00000513666 TTC21AQ8NDW8 1320 aa13.03□□□□□ -0.32
CAST-239ENST00000513666 KAT6BQ8WYB5 2073 aa13.02□□□□□ -0.33
CAST-239ENST00000513666 NLGN2Q8NFZ4 835 aa13.02□□□□□ -0.33
CAST-239ENST00000513666 TUBGCP6Q96RT7 1819 aa13.01□□□□□ -0.33
CAST-239ENST00000513666 IL2RBP14784 551 aa13.01□□□□□ -0.33
CAST-239ENST00000513666 SLC27A3Q5K4L6 730 aa13.01□□□□□ -0.33
CAST-239ENST00000513666 PNPLA7Q6ZV29 1317 aa13.01□□□□□ -0.33
CAST-239ENST00000513666 ERBB3P21860 1342 aa13□□□□□ -0.33
CAST-239ENST00000513666 EVC2Q86UK5 1308 aa13□□□□□ -0.33
CAST-239ENST00000513666 GRIN3BO60391 1043 aa13□□□□□ -0.33
CAST-239ENST00000513666 NLRP2Q9NX02 1062 aa12.99□□□□□ -0.33
CAST-239ENST00000513666 GOLGB1Q14789 3259 aaKnown RBP12.99□□□□□ -0.33
CAST-239ENST00000513666 YBX3P16989 372 aaKnown RBP eCLIP12.98□□□□□ -0.335e-8■■■□□ 18.2
CAST-239ENST00000513666 ATP10DQ9P241 1426 aa12.98□□□□□ -0.33
CAST-239ENST00000513666 USP54Q70EL1 1684 aa12.98□□□□□ -0.33
CAST-239ENST00000513666 TFCP2L1Q9NZI6 479 aa12.98□□□□□ -0.33
CAST-239ENST00000513666 SSUH2Q9Y2M2 353 aa12.98□□□□□ -0.33
CAST-239ENST00000513666 LTN1O94822 1766 aa12.97□□□□□ -0.33
CAST-239ENST00000513666 MON2Q7Z3U7 1717 aa12.96□□□□□ -0.33
CAST-239ENST00000513666 USP31Q70CQ4 1352 aa12.96□□□□□ -0.33
CAST-239ENST00000513666 KTN1Q86UP2 1357 aaKnown RBP12.96□□□□□ -0.33
CAST-239ENST00000513666 PITPNM1O00562 1244 aa12.96□□□□□ -0.33
CAST-239ENST00000513666 LY75O60449 1722 aa12.95□□□□□ -0.34
CAST-239ENST00000513666 ANKRD24Q8TF21 1146 aa12.95□□□□□ -0.34
CAST-239ENST00000513666 HSPA6P17066 643 aa12.94□□□□□ -0.34
CAST-239ENST00000513666 KCNQ4P56696 695 aa12.94□□□□□ -0.34
CAST-239ENST00000513666 GPBP1L1Q9HC44 474 aaPredicted RBP12.93□□□□□ -0.34
CAST-239ENST00000513666 ADCY9O60503 1353 aa12.93□□□□□ -0.34
CAST-239ENST00000513666 DDX54Q8TDD1 881 aaKnown RBP12.93□□□□□ -0.34
CAST-239ENST00000513666 DOT1LQ8TEK3 1739 aa12.92□□□□□ -0.34
CAST-239ENST00000513666 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.92□□□□□ -0.34
CAST-239ENST00000513666 NSD2O96028 1365 aa12.92□□□□□ -0.34
CAST-239ENST00000513666 ANKRD36BQ8N2N9 1353 aa12.92□□□□□ -0.34
CAST-239ENST00000513666 FAM208AQ9UK61 1670 aaKnown RBP12.91□□□□□ -0.34
CAST-239ENST00000513666 NME9Q86XW9 330 aa12.91□□□□□ -0.34
CAST-239ENST00000513666 COL23A1Q86Y22 540 aaPredicted RBP12.91□□□□□ -0.34
CAST-239ENST00000513666 SYTL4Q96C24 671 aaPredicted RBP12.91□□□□□ -0.34
CAST-239ENST00000513666 PRIM1P49642 420 aaKnown RBP12.9□□□□□ -0.34
CAST-239ENST00000513666 SBNO2Q9Y2G9 1366 aa12.89□□□□□ -0.35
CAST-239ENST00000513666 CCNL1Q9UK58 526 aaPredicted RBP12.89□□□□□ -0.35
CAST-239ENST00000513666 CD2APQ9Y5K6 639 aa12.89□□□□□ -0.35
CAST-239ENST00000513666 CD163L1Q9NR16 1453 aa12.89□□□□□ -0.35
CAST-239ENST00000513666 MSL1Q68DK7 614 aa12.88□□□□□ -0.35
CAST-239ENST00000513666 FXR2P51116 673 aaKnown RBP eCLIP12.88□□□□□ -0.352e-6■■■□□ 16.4
CAST-239ENST00000513666 PIP4P2Q8N4L2 257 aa12.88□□□□□ -0.35
CAST-239ENST00000513666 ZNF526Q8TF50 670 aaPredicted RBP12.88□□□□□ -0.35
CAST-239ENST00000513666 IP6K1Q92551 441 aa12.87□□□□□ -0.35
CAST-239ENST00000513666 C5P01031 1676 aa12.86□□□□□ -0.35
CAST-239ENST00000513666 ROCK2O75116 1388 aaKnown RBP12.85□□□□□ -0.35
CAST-239ENST00000513666 USP47Q96K76 1375 aa12.85□□□□□ -0.35
CAST-239ENST00000513666 EDC4Q6P2E9 1401 aaKnown RBP12.85□□□□□ -0.35
CAST-239ENST00000513666 L3MBTL2Q969R5 705 aa12.85□□□□□ -0.35
CAST-239ENST00000513666 FLAD1Q8NFF5 587 aa12.84□□□□□ -0.35
CAST-239ENST00000513666 ZCRB1Q8TBF4 217 aaKnown RBP12.84□□□□□ -0.35
CAST-239ENST00000513666 LTV1Q96GA3 475 aaPredicted RBP12.84□□□□□ -0.35
CAST-239ENST00000513666 KIF3CO14782 793 aa12.83□□□□□ -0.35
CAST-239ENST00000513666 HDGFL2Q7Z4V5 671 aaPredicted RBP12.83□□□□□ -0.35
CAST-239ENST00000513666 TAF1LQ8IZX4 1826 aa12.83□□□□□ -0.36
CAST-239ENST00000513666 RGPD2P0DJD1 1756 aa12.83□□□□□ -0.36
CAST-239ENST00000513666 MEGF6O75095 1541 aa12.83□□□□□ -0.36
CAST-239ENST00000513666 HMGB2P26583 209 aaKnown RBP12.83□□□□□ -0.36
CAST-239ENST00000513666 APLP1P51693 650 aa12.82□□□□□ -0.36
CAST-239ENST00000513666 SPDYE1Q8NFV5 336 aaPredicted RBP12.82□□□□□ -0.36
CAST-239ENST00000513666 TMC1Q8TDI8 760 aa12.82□□□□□ -0.36
CAST-239ENST00000513666 IGSF1Q8N6C5 1336 aa12.82□□□□□ -0.36
CAST-239ENST00000513666 SLC12A5Q9H2X9 1139 aa12.81□□□□□ -0.36
CAST-239ENST00000513666 CICQ96RK0 1608 aaPredicted RBP12.8□□□□□ -0.36
CAST-239ENST00000513666 HOXC9P31274 260 aa12.8□□□□□ -0.36
CAST-239ENST00000513666 TERF2IPQ9NYB0 399 aa12.8□□□□□ -0.36
CAST-239ENST00000513666 A0A1W2PP64 1363 aa12.8□□□□□ -0.36
CAST-239ENST00000513666 C4BP0C0L5 1744 aa12.8□□□□□ -0.36
CAST-239ENST00000513666 TOGARAM1Q9Y4F4 1720 aa12.8□□□□□ -0.36
CAST-239ENST00000513666 MAP3K19Q56UN5 1328 aa12.79□□□□□ -0.36
CAST-239ENST00000513666 DNAJC5GQ8N7S2 189 aa12.79□□□□□ -0.36
CAST-239ENST00000513666 PALLDQ8WX93 1383 aa12.78□□□□□ -0.36
CAST-239ENST00000513666 CGNL1Q0VF96 1302 aa12.78□□□□□ -0.36
CAST-239ENST00000513666 WWC3Q9ULE0 1092 aa12.78□□□□□ -0.36
CAST-239ENST00000513666 UBR3Q6ZT12 1888 aa12.78□□□□□ -0.36
CAST-239ENST00000513666 AMPHP49418 695 aa12.78□□□□□ -0.36
CAST-239ENST00000513666 NSD3Q9BZ95 1437 aa12.77□□□□□ -0.37
CAST-239ENST00000513666 TOMM70O94826 608 aa12.77□□□□□ -0.37
CAST-239ENST00000513666 AMIGO3Q86WK7 504 aa12.77□□□□□ -0.37
CAST-239ENST00000513666 AK7Q96M32 723 aa12.77□□□□□ -0.37
CAST-239ENST00000513666 RTL1A6NKG5 1358 aa12.76□□□□□ -0.37
CAST-239ENST00000513666 NBPF6Q5VWK0 638 aa12.76□□□□□ -0.37
CAST-239ENST00000513666 COG3Q96JB2 828 aa12.76□□□□□ -0.37
CAST-239ENST00000513666 NBPF4Q96M43 638 aa12.76□□□□□ -0.37
CAST-239ENST00000513666 RAPGEF4Q8WZA2 1011 aa12.75□□□□□ -0.37
CAST-239ENST00000513666 PUS7Q96PZ0 661 aaKnown RBP12.75□□□□□ -0.37
CAST-239ENST00000513666 WDR90Q96KV7 1748 aa12.75□□□□□ -0.37
CAST-239ENST00000513666 ITGB4P16144 1822 aa12.75□□□□□ -0.37
CAST-239ENST00000513666 PCDH11XQ9BZA7 1347 aa12.74□□□□□ -0.37
CAST-239ENST00000513666 PCDH11YQ9BZA8 1340 aa12.74□□□□□ -0.37
CAST-239ENST00000513666 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.74□□□□□ -0.37
CAST-239ENST00000513666 FBLN1P23142 703 aa12.74□□□□□ -0.37
CAST-239ENST00000513666 MPRIPQ6WCQ1 1025 aa12.74□□□□□ -0.37
CAST-239ENST00000513666 USHBP1Q8N6Y0 703 aa12.74□□□□□ -0.37
CAST-239ENST00000513666 SMARCC1Q92922 1105 aaPredicted RBP12.74□□□□□ -0.37
CAST-239ENST00000513666 PHF14O94880 888 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms