RNA–Protein interactions for RNA: ENST00000513609.1

CSF1R-206, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 5

Gene CSF1R, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-206ENST00000513609 CCNL1Q9UK58 526 aaPredicted RBP18.43■□□□□ 0.54
CSF1R-206ENST00000513609 CGNL1Q0VF96 1302 aa18.43■□□□□ 0.54
CSF1R-206ENST00000513609 AKT1S1Q96B36 256 aa18.42■□□□□ 0.54
CSF1R-206ENST00000513609 MON2Q7Z3U7 1717 aa18.41■□□□□ 0.54
CSF1R-206ENST00000513609 PELP1Q8IZL8 1130 aaKnown RBP18.4■□□□□ 0.54
CSF1R-206ENST00000513609 SGIP1Q9BQI5 828 aa18.4■□□□□ 0.54
CSF1R-206ENST00000513609 HMGB2P26583 209 aaKnown RBP18.39■□□□□ 0.53
CSF1R-206ENST00000513609 RGPD5Q99666 1765 aa18.39■□□□□ 0.53
CSF1R-206ENST00000513609 RTL1A6NKG5 1358 aa18.39■□□□□ 0.53
CSF1R-206ENST00000513609 MPRIPQ6WCQ1 1025 aa18.38■□□□□ 0.53
CSF1R-206ENST00000513609 TIMELESSQ9UNS1 1208 aa18.38■□□□□ 0.53
CSF1R-206ENST00000513609 CARD14Q9BXL6 1004 aa18.37■□□□□ 0.53
CSF1R-206ENST00000513609 RGPD3A6NKT7 1758 aaPredicted RBP18.37■□□□□ 0.53
CSF1R-206ENST00000513609 RGPD4Q7Z3J3 1758 aa18.37■□□□□ 0.53
CSF1R-206ENST00000513609 PNPLA7Q6ZV29 1317 aa18.36■□□□□ 0.53
CSF1R-206ENST00000513609 PCDH11XQ9BZA7 1347 aa18.36■□□□□ 0.53
CSF1R-206ENST00000513609 PCDH11YQ9BZA8 1340 aa18.36■□□□□ 0.53
CSF1R-206ENST00000513609 SBF2Q86WG5 1849 aa18.35■□□□□ 0.53
CSF1R-206ENST00000513609 INSRP06213 1382 aa18.35■□□□□ 0.53
CSF1R-206ENST00000513609 FLT4P35916 1363 aa18.34■□□□□ 0.53
CSF1R-206ENST00000513609 SPG7Q9UQ90 795 aa18.34■□□□□ 0.53
CSF1R-206ENST00000513609 EMILIN1Q9Y6C2 1016 aa18.34■□□□□ 0.53
CSF1R-206ENST00000513609 TNNT2P45379 298 aaPredicted RBP18.33■□□□□ 0.52
CSF1R-206ENST00000513609 ZNF784Q8NCA9 323 aaPredicted RBP18.33■□□□□ 0.52
CSF1R-206ENST00000513609 MEGF6O75095 1541 aa18.33■□□□□ 0.52
CSF1R-206ENST00000513609 NHSQ6T4R5 1651 aa18.32■□□□□ 0.52
CSF1R-206ENST00000513609 WNK3Q9BYP7 1800 aa18.31■□□□□ 0.52
CSF1R-206ENST00000513609 COL23A1Q86Y22 540 aaPredicted RBP18.31■□□□□ 0.52
CSF1R-206ENST00000513609 SMARCC1Q92922 1105 aaPredicted RBP18.31■□□□□ 0.52
CSF1R-206ENST00000513609 NSD3Q9BZ95 1437 aa18.31■□□□□ 0.52
CSF1R-206ENST00000513609 KIF24Q5T7B8 1368 aa18.3■□□□□ 0.52
CSF1R-206ENST00000513609 LTN1O94822 1766 aa18.3■□□□□ 0.52
CSF1R-206ENST00000513609 MSL1Q68DK7 614 aa18.3■□□□□ 0.52
CSF1R-206ENST00000513609 FLAD1Q8NFF5 587 aa18.3■□□□□ 0.52
CSF1R-206ENST00000513609 USP54Q70EL1 1684 aa18.3■□□□□ 0.52
CSF1R-206ENST00000513609 CASZ1Q86V15 1759 aa18.3■□□□□ 0.52
CSF1R-206ENST00000513609 CYP27B1O15528 508 aa18.29■□□□□ 0.52
CSF1R-206ENST00000513609 AK7Q96M32 723 aa18.29■□□□□ 0.52
CSF1R-206ENST00000513609 NSD2O96028 1365 aa18.29■□□□□ 0.52
CSF1R-206ENST00000513609 MAP3K5Q99683 1374 aa18.28■□□□□ 0.52
CSF1R-206ENST00000513609 PALLDQ8WX93 1383 aa18.27■□□□□ 0.51
CSF1R-206ENST00000513609 WASHC2AQ641Q2 1341 aa18.26■□□□□ 0.51
CSF1R-206ENST00000513609 MYOM1P52179 1685 aa18.26■□□□□ 0.51
CSF1R-206ENST00000513609 NLGN2Q8NFZ4 835 aa18.26■□□□□ 0.51
CSF1R-206ENST00000513609 PIGBQ92521 554 aa18.26■□□□□ 0.51
CSF1R-206ENST00000513609 EYA1Q99502 592 aa18.26■□□□□ 0.51
CSF1R-206ENST00000513609 TMOD3Q9NYL9 352 aa18.26■□□□□ 0.51
CSF1R-206ENST00000513609 UTRNP46939 3433 aa18.26■□□□□ 0.51
CSF1R-206ENST00000513609 GRIN3BO60391 1043 aa18.25■□□□□ 0.51
CSF1R-206ENST00000513609 PHF14O94880 888 aa18.25■□□□□ 0.51
CSF1R-206ENST00000513609 EIF4G2P78344 907 aaKnown RBP eCLIP18.25■□□□□ 0.51
CSF1R-206ENST00000513609 POLKQ9UBT6 870 aa18.25■□□□□ 0.51
CSF1R-206ENST00000513609 IFNL2Q8IZJ0 200 aa18.24■□□□□ 0.51
CSF1R-206ENST00000513609 CCER1Q8TC90 406 aaPredicted RBP18.24■□□□□ 0.51
CSF1R-206ENST00000513609 CLSPNQ9HAW4 1339 aa18.23■□□□□ 0.51
CSF1R-206ENST00000513609 BTAF1O14981 1849 aa18.23■□□□□ 0.51
CSF1R-206ENST00000513609 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.23■□□□□ 0.51
CSF1R-206ENST00000513609 NKX1-1Q15270 411 aaPredicted RBP18.22■□□□□ 0.51
CSF1R-206ENST00000513609 PANK3Q9H999 370 aa18.22■□□□□ 0.51
CSF1R-206ENST00000513609 KAT6BQ8WYB5 2073 aa18.22■□□□□ 0.51
CSF1R-206ENST00000513609 LOC102724428A0A0B4J2F2 783 aa18.21■□□□□ 0.51
CSF1R-206ENST00000513609 SIK1P57059 783 aa18.21■□□□□ 0.51
CSF1R-206ENST00000513609 FAM208AQ9UK61 1670 aaKnown RBP18.2■□□□□ 0.5
CSF1R-206ENST00000513609 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.2■□□□□ 0.5
CSF1R-206ENST00000513609 ATP6V1AP38606 617 aa18.2■□□□□ 0.5
CSF1R-206ENST00000513609 EIF4A2Q14240 407 aaKnown RBP18.2■□□□□ 0.5
CSF1R-206ENST00000513609 CD2APQ9Y5K6 639 aa18.2■□□□□ 0.5
CSF1R-206ENST00000513609 PAPPAQ13219 1627 aa18.2■□□□□ 0.5
CSF1R-206ENST00000513609 HSPA5P11021 654 aaKnown RBP18.19■□□□□ 0.5
CSF1R-206ENST00000513609 PHKG2P15735 406 aa18.19■□□□□ 0.5
CSF1R-206ENST00000513609 MORC1Q86VD1 984 aa18.19■□□□□ 0.5
CSF1R-206ENST00000513609 ASAP1Q9ULH1 1129 aa18.19■□□□□ 0.5
CSF1R-206ENST00000513609 SMIM5Q71RC9 77 aa18.18■□□□□ 0.5
CSF1R-206ENST00000513609 SENP3-EIF4A1A0A087X0R7 540 aa18.17■□□□□ 0.5
CSF1R-206ENST00000513609 GNPATO15228 680 aa18.17■□□□□ 0.5
CSF1R-206ENST00000513609 C1QTNF8P60827 252 aa18.17■□□□□ 0.5
CSF1R-206ENST00000513609 PLEKHO1Q53GL0 409 aaPredicted RBP18.17■□□□□ 0.5
CSF1R-206ENST00000513609 RBM42Q9BTD8 480 aaKnown RBP18.17■□□□□ 0.5
CSF1R-206ENST00000513609 GIGYF1O75420 1035 aaPredicted RBP18.16■□□□□ 0.5
CSF1R-206ENST00000513609 HSP90AB1P08238 724 aaKnown RBP18.16■□□□□ 0.5
CSF1R-206ENST00000513609 YBX3P16989 372 aaKnown RBP eCLIP18.16■□□□□ 0.5
CSF1R-206ENST00000513609 SSFA2P28290 1259 aa18.15■□□□□ 0.5
CSF1R-206ENST00000513609 LINC00116Q8NCU8 138 aa18.15■□□□□ 0.5
CSF1R-206ENST00000513609 ATG3Q9NT62 314 aa18.15■□□□□ 0.5
CSF1R-206ENST00000513609 KNSTRNQ9Y448 316 aa18.15■□□□□ 0.5
CSF1R-206ENST00000513609 CABP4P57796 275 aa18.14■□□□□ 0.49
CSF1R-206ENST00000513609 ERVV-2B6SEH9 535 aa18.13■□□□□ 0.49
CSF1R-206ENST00000513609 AMOTQ4VCS5 1084 aa18.13■□□□□ 0.49
CSF1R-206ENST00000513609 C1orf141Q5JVX7 400 aa18.13■□□□□ 0.49
CSF1R-206ENST00000513609 TRAPPC3LQ5T215 181 aa18.13■□□□□ 0.49
CSF1R-206ENST00000513609 DCAF5Q96JK2 942 aa18.13■□□□□ 0.49
CSF1R-206ENST00000513609 WWC3Q9ULE0 1092 aa18.13■□□□□ 0.49
CSF1R-206ENST00000513609 DOT1LQ8TEK3 1739 aa18.12■□□□□ 0.49
CSF1R-206ENST00000513609 MTHFSP49914 203 aa18.12■□□□□ 0.49
CSF1R-206ENST00000513609 ITPK1Q13572 414 aa18.12■□□□□ 0.49
CSF1R-206ENST00000513609 ZNF530Q6P9A1 599 aaPredicted RBP18.12■□□□□ 0.49
CSF1R-206ENST00000513609 AMIGO3Q86WK7 504 aa18.12■□□□□ 0.49
CSF1R-206ENST00000513609 RTCBQ9Y3I0 505 aaKnown RBP18.12■□□□□ 0.49
CSF1R-206ENST00000513609 GOLGB1Q14789 3259 aaKnown RBP18.11■□□□□ 0.49
CSF1R-206ENST00000513609 RFC4P35249 363 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms