RNA–Protein interactions for RNA: ENST00000513603.1

GIN1-206, Transcript of gypsy retrotransposon integrase 1, humanhuman

TSL 2

Gene GIN1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GIN1-206ENST00000513603 TBC1D9Q6ZT07 1266 aa8.91□□□□□ -0.98
GIN1-206ENST00000513603 AMOTL2Q9Y2J4 779 aa8.91□□□□□ -0.98
GIN1-206ENST00000513603 RFX1P22670 979 aa8.9□□□□□ -0.98
GIN1-206ENST00000513603 KIFC2Q96AC6 838 aa8.9□□□□□ -0.98
GIN1-206ENST00000513603 CDCA7Q9BWT1 371 aaPredicted RBP8.89□□□□□ -0.99
GIN1-206ENST00000513603 PPP1R12CQ9BZL4 782 aa8.89□□□□□ -0.99
GIN1-206ENST00000513603 TMPRSS4Q9NRS4 437 aa8.89□□□□□ -0.99
GIN1-206ENST00000513603 CCDC27Q2M243 656 aa8.88□□□□□ -0.99
GIN1-206ENST00000513603 NBPF20Q3BBV1 942 aa8.88□□□□□ -0.99
GIN1-206ENST00000513603 CHIC2Q9UKJ5 165 aa8.88□□□□□ -0.99
GIN1-206ENST00000513603 PALM3A6NDB9 673 aaPredicted RBP8.87□□□□□ -0.99
GIN1-206ENST00000513603 ERVH48-1M5A8F1 160 aa8.87□□□□□ -0.99
GIN1-206ENST00000513603 IVNS1ABPQ9Y6Y0 642 aa8.87□□□□□ -0.99
GIN1-206ENST00000513603 SCTRP47872 440 aa8.86□□□□□ -0.99
GIN1-206ENST00000513603 NR5A1Q13285 461 aa8.86□□□□□ -0.99
GIN1-206ENST00000513603 SND1Q7KZF4 910 aaKnown RBP eCLIP8.86□□□□□ -0.99
GIN1-206ENST00000513603 RNF135Q8IUD6 432 aa8.86□□□□□ -0.99
GIN1-206ENST00000513603 DEPDC4Q8N2C3 294 aa8.86□□□□□ -0.99
GIN1-206ENST00000513603 KLF16Q9BXK1 252 aaPredicted RBP8.86□□□□□ -0.99
GIN1-206ENST00000513603 CDV3Q9UKY7 258 aaKnown RBP8.86□□□□□ -0.99
GIN1-206ENST00000513603 SHROOM4Q9ULL8 1493 aa8.85□□□□□ -0.99
GIN1-206ENST00000513603 TIMP2P16035 220 aa8.85□□□□□ -0.99
GIN1-206ENST00000513603 SLFNL1Q499Z3 407 aa8.85□□□□□ -0.99
GIN1-206ENST00000513603 PPP1R26Q5T8A7 1209 aaPredicted RBP8.85□□□□□ -0.99
GIN1-206ENST00000513603 TFIP11Q9UBB9 837 aaKnown RBP8.85□□□□□ -0.99
GIN1-206ENST00000513603 MAFBQ9Y5Q3 323 aaPredicted RBP8.85□□□□□ -0.99
GIN1-206ENST00000513603 CARNS1A5YM72 827 aa8.84□□□□□ -0.99
GIN1-206ENST00000513603 USP17L5A8MUK1 530 aa8.84□□□□□ -0.99
GIN1-206ENST00000513603 SKIP12755 728 aa8.84□□□□□ -0.99
GIN1-206ENST00000513603 WDR4P57081 412 aaKnown RBP8.84□□□□□ -0.99
GIN1-206ENST00000513603 MCCD1P59942 119 aaPredicted RBP8.84□□□□□ -0.99
GIN1-206ENST00000513603 CCDC116Q8IYX3 515 aa8.84□□□□□ -0.99
GIN1-206ENST00000513603 PLPP7Q8NBV4 271 aa8.84□□□□□ -0.99
GIN1-206ENST00000513603 ZNF784Q8NCA9 323 aaPredicted RBP8.84□□□□□ -0.99
GIN1-206ENST00000513603 PCDHB11Q9Y5F2 797 aa8.84□□□□□ -0.99
GIN1-206ENST00000513603 CAPN5O15484 640 aaPredicted RBP8.83□□□□□ -1
GIN1-206ENST00000513603 ATP9BO43861 1147 aa8.83□□□□□ -1
GIN1-206ENST00000513603 SLC16A10Q8TF71 515 aa8.83□□□□□ -1
GIN1-206ENST00000513603 ITPKCQ96DU7 683 aa8.83□□□□□ -1
GIN1-206ENST00000513603 ZFAND3Q9H8U3 227 aa8.83□□□□□ -1
GIN1-206ENST00000513603 VRTNQ9H8Y1 702 aa8.83□□□□□ -1
GIN1-206ENST00000513603 CYLDQ9NQC7 956 aa8.83□□□□□ -1
GIN1-206ENST00000513603 USP17L3A6NCW0 530 aa8.82□□□□□ -1
GIN1-206ENST00000513603 USP17L4A6NCW7 530 aa8.82□□□□□ -1
GIN1-206ENST00000513603 LILRA1O75019 489 aa8.82□□□□□ -1
GIN1-206ENST00000513603 ATG7O95352 703 aa8.82□□□□□ -1
GIN1-206ENST00000513603 ZIC2O95409 532 aaPredicted RBP8.82□□□□□ -1
GIN1-206ENST00000513603 NCOA4Q13772 614 aa8.82□□□□□ -1
GIN1-206ENST00000513603 USP17L2Q6R6M4 530 aa8.82□□□□□ -1
GIN1-206ENST00000513603 USP17L1Q7RTZ2 530 aa8.82□□□□□ -1
GIN1-206ENST00000513603 SEPT12Q8IYM1 358 aa8.82□□□□□ -1
GIN1-206ENST00000513603 TMEM88BA6NKF7 163 aa8.81□□□□□ -1
GIN1-206ENST00000513603 BMP1P13497 986 aa8.81□□□□□ -1
GIN1-206ENST00000513603 LMOD1P29536 600 aaPredicted RBP8.81□□□□□ -1
GIN1-206ENST00000513603 CBLBQ13191 982 aa8.81□□□□□ -1
GIN1-206ENST00000513603 OXLD1Q5BKU9 147 aa8.81□□□□□ -1
GIN1-206ENST00000513603 NXF1Q9UBU9 619 aaKnown RBP8.81□□□□□ -1
GIN1-206ENST00000513603 DOLKQ9UPQ8 538 aa8.81□□□□□ -1
GIN1-206ENST00000513603 STAU1O95793 577 aaKnown RBP8.8□□□□□ -1
GIN1-206ENST00000513603 ADD1P35611 737 aaKnown RBP8.8□□□□□ -1
GIN1-206ENST00000513603 NFATC2IPQ8NCF5 419 aa8.8□□□□□ -1
GIN1-206ENST00000513603 FAM181BA6NEQ2 426 aa8.79□□□□□ -1
GIN1-206ENST00000513603 TRIM46Q7Z4K8 759 aa8.79□□□□□ -1
GIN1-206ENST00000513603 ZNF592Q92610 1267 aa8.79□□□□□ -1
GIN1-206ENST00000513603 GNEQ9Y223 722 aaKnown RBP8.79□□□□□ -1
GIN1-206ENST00000513603 ERVK-9P63128 1117 aa8.78□□□□□ -1
GIN1-206ENST00000513603 PLEKHM2Q8IWE5 1019 aa8.78□□□□□ -1
GIN1-206ENST00000513603 KDF1Q8NAX2 398 aaPredicted RBP8.78□□□□□ -1
GIN1-206ENST00000513603 OSBPL3Q9H4L5 887 aa8.78□□□□□ -1
GIN1-206ENST00000513603 EMILIN1Q9Y6C2 1016 aa8.78□□□□□ -1
GIN1-206ENST00000513603 GMPRP36959 345 aa8.77□□□□□ -1.01
GIN1-206ENST00000513603 CDCA8Q53HL2 280 aa8.77□□□□□ -1.01
GIN1-206ENST00000513603 KANK4Q5T7N3 995 aaPredicted RBP8.77□□□□□ -1.01
GIN1-206ENST00000513603 RNF20Q5VTR2 975 aa8.77□□□□□ -1.01
GIN1-206ENST00000513603 KIAA1024Q9UPX6 916 aa8.77□□□□□ -1.01
GIN1-206ENST00000513603 IRF7Q92985 503 aa8.76□□□□□ -1.01
GIN1-206ENST00000513603 VEGFBP49765 207 aa8.75□□□□□ -1.01
GIN1-206ENST00000513603 CLDN10P78369 228 aa8.75□□□□□ -1.01
GIN1-206ENST00000513603 DHX9Q08211 1270 aaKnown RBP8.75□□□□□ -1.01
GIN1-206ENST00000513603 MAP7D1Q3KQU3 841 aa8.75□□□□□ -1.01
GIN1-206ENST00000513603 CC2D2BQ6DHV5 1058 aa8.75□□□□□ -1.01
GIN1-206ENST00000513603 B4GALNT3Q6L9W6 998 aa8.75□□□□□ -1.01
GIN1-206ENST00000513603 NPAS3Q8IXF0 933 aa8.75□□□□□ -1.01
GIN1-206ENST00000513603 ZSCAN1Q8NBB4 408 aa8.75□□□□□ -1.01
GIN1-206ENST00000513603 AGBL1Q96MI9 1066 aa8.75□□□□□ -1.01
GIN1-206ENST00000513603 PGPEP1Q9NXJ5 209 aa8.75□□□□□ -1.01
GIN1-206ENST00000513603 LORP23490 312 aaPredicted RBP8.74□□□□□ -1.01
GIN1-206ENST00000513603 MRPL14Q6P1L8 145 aaKnown RBP8.74□□□□□ -1.01
GIN1-206ENST00000513603 MEIOBQ8N635 442 aa8.74□□□□□ -1.01
GIN1-206ENST00000513603 EML3Q32P44 896 aa8.73□□□□□ -1.01
GIN1-206ENST00000513603 CRTC2Q53ET0 693 aaPredicted RBP8.73□□□□□ -1.01
GIN1-206ENST00000513603 Q6ZVU0 165 aa8.73□□□□□ -1.01
GIN1-206ENST00000513603 MKRN1Q9UHC7 482 aaKnown RBP8.73□□□□□ -1.01
GIN1-206ENST00000513603 PCDHGA11Q9Y5H2 935 aa8.73□□□□□ -1.01
GIN1-206ENST00000513603 H3BM21 787 aa8.72□□□□□ -1.01
GIN1-206ENST00000513603 PURBQ96QR8 312 aaKnown RBP8.72□□□□□ -1.01
GIN1-206ENST00000513603 RBM47A0AV96 593 aaKnown RBP8.71□□□□□ -1.02
GIN1-206ENST00000513603 UNCXA6NJT0 531 aa8.71□□□□□ -1.02
GIN1-206ENST00000513603 DKK1O94907 266 aa8.71□□□□□ -1.02
GIN1-206ENST00000513603 ADH1AP07327 375 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms