RNA–Protein interactions for RNA: ENST00000513589.1

ABCC3-213, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 4

Gene ABCC3, Length 582 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-213ENST00000513589 USHBP1Q8N6Y0 703 aa17.17■□□□□ 0.34
ABCC3-213ENST00000513589 ZCRB1Q8TBF4 217 aaKnown RBP17.17■□□□□ 0.34
ABCC3-213ENST00000513589 RTF1Q92541 710 aaKnown RBP17.17■□□□□ 0.34
ABCC3-213ENST00000513589 CALD1Q05682 793 aaKnown RBP17.16■□□□□ 0.34
ABCC3-213ENST00000513589 DDB1Q16531 1140 aa17.16■□□□□ 0.34
ABCC3-213ENST00000513589 HTATSF1O43719 755 aaKnown RBP17.15■□□□□ 0.34
ABCC3-213ENST00000513589 PDE3BQ13370 1112 aa17.15■□□□□ 0.34
ABCC3-213ENST00000513589 AEBP1Q8IUX7 1158 aa17.15■□□□□ 0.34
ABCC3-213ENST00000513589 ATRNO75882 1429 aa17.14■□□□□ 0.33
ABCC3-213ENST00000513589 NCAPD2Q15021 1401 aa17.14■□□□□ 0.33
ABCC3-213ENST00000513589 PLCH1Q4KWH8 1693 aa17.14■□□□□ 0.33
ABCC3-213ENST00000513589 NFE2L2Q16236 605 aa17.14■□□□□ 0.33
ABCC3-213ENST00000513589 IFNL2Q8IZJ0 200 aa17.14■□□□□ 0.33
ABCC3-213ENST00000513589 PLEKHF1Q96S99 279 aa17.14■□□□□ 0.33
ABCC3-213ENST00000513589 PCDH11XQ9BZA7 1347 aa17.14■□□□□ 0.33
ABCC3-213ENST00000513589 PCDH11YQ9BZA8 1340 aa17.14■□□□□ 0.33
ABCC3-213ENST00000513589 ONECUT3O60422 494 aaPredicted RBP17.13■□□□□ 0.33
ABCC3-213ENST00000513589 FAM98CQ17RN3 349 aaKnown RBP17.13■□□□□ 0.33
ABCC3-213ENST00000513589 AKAP4Q5JQC9 854 aa17.13■□□□□ 0.33
ABCC3-213ENST00000513589 CCDC146Q8IYE0 955 aa17.13■□□□□ 0.33
ABCC3-213ENST00000513589 ZNF530Q6P9A1 599 aaPredicted RBP17.12■□□□□ 0.33
ABCC3-213ENST00000513589 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.12■□□□□ 0.33
ABCC3-213ENST00000513589 GNAT3A8MTJ3 354 aa17.11■□□□□ 0.33
ABCC3-213ENST00000513589 APAF1O14727 1248 aa17.11■□□□□ 0.33
ABCC3-213ENST00000513589 RIPK4P57078 832 aa17.11■□□□□ 0.33
ABCC3-213ENST00000513589 TMPOP42166 694 aaKnown RBP17.1■□□□□ 0.33
ABCC3-213ENST00000513589 CCDC27Q2M243 656 aa17.09■□□□□ 0.33
ABCC3-213ENST00000513589 MTHFSDQ2M296 383 aaKnown RBP17.09■□□□□ 0.33
ABCC3-213ENST00000513589 OVOS2A0A0G2JMS6 1433 aa17.09■□□□□ 0.33
ABCC3-213ENST00000513589 RGPD5Q99666 1765 aa17.09■□□□□ 0.33
ABCC3-213ENST00000513589 NRAPQ86VF7 1730 aa17.08■□□□□ 0.32
ABCC3-213ENST00000513589 HNRNPUQ00839 825 aaKnown RBP eCLIP17.08■□□□□ 0.326e-7■■■□□ 18.3
ABCC3-213ENST00000513589 SEPT12Q8IYM1 358 aa17.08■□□□□ 0.32
ABCC3-213ENST00000513589 DDX54Q8TDD1 881 aaKnown RBP17.08■□□□□ 0.32
ABCC3-213ENST00000513589 DCAF5Q96JK2 942 aa17.08■□□□□ 0.32
ABCC3-213ENST00000513589 PHACTR3Q96KR7 559 aa17.08■□□□□ 0.32
ABCC3-213ENST00000513589 RGPD1P0DJD0 1748 aa17.07■□□□□ 0.32
ABCC3-213ENST00000513589 NEUROD2Q15784 382 aa17.07■□□□□ 0.32
ABCC3-213ENST00000513589 HMGB2P26583 209 aaKnown RBP17.06■□□□□ 0.32
ABCC3-213ENST00000513589 MAP3K5Q99683 1374 aa17.05■□□□□ 0.32
ABCC3-213ENST00000513589 PHKG2P15735 406 aa17.05■□□□□ 0.32
ABCC3-213ENST00000513589 TEFQ10587 303 aa17.05■□□□□ 0.32
ABCC3-213ENST00000513589 WDR63Q8IWG1 891 aa17.05■□□□□ 0.32
ABCC3-213ENST00000513589 DISP2A7MBM2 1401 aa17.04■□□□□ 0.32
ABCC3-213ENST00000513589 NKX1-1Q15270 411 aaPredicted RBP17.04■□□□□ 0.32
ABCC3-213ENST00000513589 KRT27Q7Z3Y8 459 aa17.04■□□□□ 0.32
ABCC3-213ENST00000513589 MEGF6O75095 1541 aa17.03■□□□□ 0.32
ABCC3-213ENST00000513589 ERVV-2B6SEH9 535 aa17.03■□□□□ 0.32
ABCC3-213ENST00000513589 FAM196AQ6ZSG2 479 aa17.03■□□□□ 0.32
ABCC3-213ENST00000513589 BABAM1Q9NWV8 329 aa17.03■□□□□ 0.32
ABCC3-213ENST00000513589 TNS2Q63HR2 1409 aa17.03■□□□□ 0.32
ABCC3-213ENST00000513589 PARP4Q9UKK3 1724 aaKnown RBP17.02■□□□□ 0.32
ABCC3-213ENST00000513589 CHMP4AQ9BY43 222 aa17.02■□□□□ 0.32
ABCC3-213ENST00000513589 CABP4P57796 275 aa17.01■□□□□ 0.31
ABCC3-213ENST00000513589 POTEAQ6S8J7 498 aa17.01■□□□□ 0.31
ABCC3-213ENST00000513589 RGS17Q9UGC6 210 aaPredicted RBP17.01■□□□□ 0.31
ABCC3-213ENST00000513589 RRP7AQ9Y3A4 280 aaKnown RBP17.01■□□□□ 0.31
ABCC3-213ENST00000513589 CYP27B1O15528 508 aa17■□□□□ 0.31
ABCC3-213ENST00000513589 GNAI1P63096 354 aa17■□□□□ 0.31
ABCC3-213ENST00000513589 GOLGA2Q08379 1002 aa17■□□□□ 0.31
ABCC3-213ENST00000513589 WWC1Q8IX03 1113 aa17■□□□□ 0.31
ABCC3-213ENST00000513589 MYH16Q9H6N6 1097 aa17■□□□□ 0.31
ABCC3-213ENST00000513589 IL16Q14005 1332 aa16.99■□□□□ 0.31
ABCC3-213ENST00000513589 ZBED9Q6R2W3 1325 aa16.99■□□□□ 0.31
ABCC3-213ENST00000513589 RNMTO43148 476 aaKnown RBP16.99■□□□□ 0.31
ABCC3-213ENST00000513589 TAF7Q15545 349 aaPredicted RBP16.99■□□□□ 0.31
ABCC3-213ENST00000513589 MPRIPQ6WCQ1 1025 aa16.99■□□□□ 0.31
ABCC3-213ENST00000513589 SALL2Q9Y467 1007 aaPredicted RBP16.99■□□□□ 0.31
ABCC3-213ENST00000513589 TMOD3Q9NYL9 352 aa16.98■□□□□ 0.31
ABCC3-213ENST00000513589 RGPD2P0DJD1 1756 aa16.97■□□□□ 0.31
ABCC3-213ENST00000513589 E9PSI1 815 aa16.97■□□□□ 0.31
ABCC3-213ENST00000513589 MARCH10Q8NA82 808 aaPredicted RBP16.97■□□□□ 0.31
ABCC3-213ENST00000513589 YTHDC1Q96MU7 727 aaKnown RBP16.97■□□□□ 0.31
ABCC3-213ENST00000513589 GLI3P10071 1580 aa16.97■□□□□ 0.31
ABCC3-213ENST00000513589 IFT57Q9NWB7 429 aa16.96■□□□□ 0.31
ABCC3-213ENST00000513589 TRIM35Q9UPQ4 493 aa16.96■□□□□ 0.31
ABCC3-213ENST00000513589 BCL9O00512 1426 aa16.96■□□□□ 0.3
ABCC3-213ENST00000513589 MCM10Q7L590 875 aa16.95■□□□□ 0.3
ABCC3-213ENST00000513589 TTC5Q8N0Z6 440 aa16.95■□□□□ 0.3
ABCC3-213ENST00000513589 IL17REQ8NFR9 667 aa16.95■□□□□ 0.3
ABCC3-213ENST00000513589 SYTL4Q96C24 671 aaPredicted RBP16.95■□□□□ 0.3
ABCC3-213ENST00000513589 CFAP44Q96MT7 982 aa16.95■□□□□ 0.3
ABCC3-213ENST00000513589 SLC52A2Q9HAB3 445 aa16.95■□□□□ 0.3
ABCC3-213ENST00000513589 BTBD11A6QL63 1104 aa16.94■□□□□ 0.3
ABCC3-213ENST00000513589 SMARCC1Q92922 1105 aaPredicted RBP16.94■□□□□ 0.3
ABCC3-213ENST00000513589 LAS1LQ9Y4W2 734 aaKnown RBP16.94■□□□□ 0.3
ABCC3-213ENST00000513589 CEMIPQ8WUJ3 1361 aa16.93■□□□□ 0.3
ABCC3-213ENST00000513589 LGR6Q9HBX8 967 aa16.93■□□□□ 0.3
ABCC3-213ENST00000513589 TSPYL4Q9UJ04 414 aa16.93■□□□□ 0.3
ABCC3-213ENST00000513589 SF3B2Q13435 895 aaKnown RBP16.92■□□□□ 0.3
ABCC3-213ENST00000513589 NFATC2IPQ8NCF5 419 aa16.92■□□□□ 0.3
ABCC3-213ENST00000513589 PKD1L3Q7Z443 1732 aa16.92■□□□□ 0.3
ABCC3-213ENST00000513589 THSD7AQ9UPZ6 1657 aa16.91■□□□□ 0.3
ABCC3-213ENST00000513589 PRIM1P49642 420 aaKnown RBP16.91■□□□□ 0.3
ABCC3-213ENST00000513589 DCTN1Q14203 1278 aa16.91■□□□□ 0.3
ABCC3-213ENST00000513589 BCL11BQ9C0K0 894 aaPredicted RBP16.91■□□□□ 0.3
ABCC3-213ENST00000513589 CCDC125Q86Z20 511 aa16.9■□□□□ 0.3
ABCC3-213ENST00000513589 SOS1Q07889 1333 aaPredicted RBP16.9■□□□□ 0.3
ABCC3-213ENST00000513589 CHL1O00533 1208 aa16.89■□□□□ 0.29
ABCC3-213ENST00000513589 ZNF521Q96K83 1311 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms