RNA–Protein interactions for RNA: ENST00000513438.1

POLR2J3-217, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3 BASIC

Gene POLR2J3, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-217ENST00000513438 USHBP1Q8N6Y0 703 aa18.67■□□□□ 0.58
POLR2J3-217ENST00000513438 KCNQ4P56696 695 aa18.66■□□□□ 0.58
POLR2J3-217ENST00000513438 AKT1S1Q96B36 256 aa18.66■□□□□ 0.58
POLR2J3-217ENST00000513438 RTL1A6NKG5 1358 aa18.66■□□□□ 0.58
POLR2J3-217ENST00000513438 PAPPAQ13219 1627 aa18.65■□□□□ 0.58
POLR2J3-217ENST00000513438 HSP90AB2PQ58FF8 381 aa18.65■□□□□ 0.58
POLR2J3-217ENST00000513438 ARXQ96QS3 562 aa18.65■□□□□ 0.58
POLR2J3-217ENST00000513438 CARD14Q9BXL6 1004 aa18.65■□□□□ 0.58
POLR2J3-217ENST00000513438 MEGF6O75095 1541 aa18.64■□□□□ 0.58
POLR2J3-217ENST00000513438 ZNF784Q8NCA9 323 aaPredicted RBP18.64■□□□□ 0.57
POLR2J3-217ENST00000513438 RAPGEF4Q8WZA2 1011 aa18.64■□□□□ 0.57
POLR2J3-217ENST00000513438 TATP17735 454 aaPredicted RBP18.63■□□□□ 0.57
POLR2J3-217ENST00000513438 TIMELESSQ9UNS1 1208 aa18.63■□□□□ 0.57
POLR2J3-217ENST00000513438 CGNL1Q0VF96 1302 aa18.62■□□□□ 0.57
POLR2J3-217ENST00000513438 INSRP06213 1382 aa18.62■□□□□ 0.57
POLR2J3-217ENST00000513438 SMG6Q86US8 1419 aaKnown RBP18.61■□□□□ 0.57
POLR2J3-217ENST00000513438 NSD2O96028 1365 aa18.61■□□□□ 0.57
POLR2J3-217ENST00000513438 KLHL34Q8N239 644 aa18.61■□□□□ 0.57
POLR2J3-217ENST00000513438 SLC16A10Q8TF71 515 aa18.61■□□□□ 0.57
POLR2J3-217ENST00000513438 TFCP2L1Q9NZI6 479 aa18.61■□□□□ 0.57
POLR2J3-217ENST00000513438 SHANK3Q9BYB0 1731 aa18.6■□□□□ 0.57
POLR2J3-217ENST00000513438 PNPLA7Q6ZV29 1317 aa18.6■□□□□ 0.57
POLR2J3-217ENST00000513438 PCGF6Q9BYE7 350 aa18.6■□□□□ 0.57
POLR2J3-217ENST00000513438 EMILIN1Q9Y6C2 1016 aa18.6■□□□□ 0.57
POLR2J3-217ENST00000513438 DOT1LQ8TEK3 1739 aa18.6■□□□□ 0.57
POLR2J3-217ENST00000513438 FLT4P35916 1363 aa18.59■□□□□ 0.57
POLR2J3-217ENST00000513438 UTRNP46939 3433 aa18.59■□□□□ 0.57
POLR2J3-217ENST00000513438 GPR162Q16538 588 aa18.59■□□□□ 0.57
POLR2J3-217ENST00000513438 CCNL1Q9UK58 526 aaPredicted RBP18.59■□□□□ 0.57
POLR2J3-217ENST00000513438 KIF20BQ96Q89 1820 aa18.58■□□□□ 0.57
POLR2J3-217ENST00000513438 KIF24Q5T7B8 1368 aa18.58■□□□□ 0.57
POLR2J3-217ENST00000513438 CHD4Q14839 1912 aa18.58■□□□□ 0.56
POLR2J3-217ENST00000513438 NSD3Q9BZ95 1437 aa18.57■□□□□ 0.56
POLR2J3-217ENST00000513438 PPM1GO15355 546 aaPredicted RBP18.57■□□□□ 0.56
POLR2J3-217ENST00000513438 POLD1P28340 1107 aa18.57■□□□□ 0.56
POLR2J3-217ENST00000513438 PELP1Q8IZL8 1130 aaKnown RBP18.56■□□□□ 0.56
POLR2J3-217ENST00000513438 LY75O60449 1722 aa18.56■□□□□ 0.56
POLR2J3-217ENST00000513438 PCDH11XQ9BZA7 1347 aa18.55■□□□□ 0.56
POLR2J3-217ENST00000513438 PCDH11YQ9BZA8 1340 aa18.55■□□□□ 0.56
POLR2J3-217ENST00000513438 CYP27B1O15528 508 aa18.55■□□□□ 0.56
POLR2J3-217ENST00000513438 POLR3GLQ9BT43 218 aa18.55■□□□□ 0.56
POLR2J3-217ENST00000513438 CLSPNQ9HAW4 1339 aa18.54■□□□□ 0.56
POLR2J3-217ENST00000513438 SENP3-EIF4A1A0A087X0R7 540 aa18.54■□□□□ 0.56
POLR2J3-217ENST00000513438 MPRIPQ6WCQ1 1025 aa18.54■□□□□ 0.56
POLR2J3-217ENST00000513438 QSER1Q2KHR3 1735 aa18.54■□□□□ 0.56
POLR2J3-217ENST00000513438 MAP3K5Q99683 1374 aa18.54■□□□□ 0.56
POLR2J3-217ENST00000513438 MSH5O43196 834 aa18.53■□□□□ 0.56
POLR2J3-217ENST00000513438 WASHC2AQ641Q2 1341 aa18.52■□□□□ 0.56
POLR2J3-217ENST00000513438 COL23A1Q86Y22 540 aaPredicted RBP18.52■□□□□ 0.56
POLR2J3-217ENST00000513438 TUBGCP6Q96RT7 1819 aa18.51■□□□□ 0.55
POLR2J3-217ENST00000513438 C1QTNF8P60827 252 aa18.51■□□□□ 0.55
POLR2J3-217ENST00000513438 EYA1Q99502 592 aa18.51■□□□□ 0.55
POLR2J3-217ENST00000513438 POLKQ9UBT6 870 aa18.5■□□□□ 0.55
POLR2J3-217ENST00000513438 MAP2P11137 1827 aaKnown RBP18.49■□□□□ 0.55
POLR2J3-217ENST00000513438 SPG7Q9UQ90 795 aa18.49■□□□□ 0.55
POLR2J3-217ENST00000513438 PALLDQ8WX93 1383 aa18.48■□□□□ 0.55
POLR2J3-217ENST00000513438 TNNT2P45379 298 aaPredicted RBP18.48■□□□□ 0.55
POLR2J3-217ENST00000513438 NKX1-1Q15270 411 aaPredicted RBP18.48■□□□□ 0.55
POLR2J3-217ENST00000513438 COL24A1Q17RW2 1714 aa18.48■□□□□ 0.55
POLR2J3-217ENST00000513438 HMGB2P26583 209 aaKnown RBP18.47■□□□□ 0.55
POLR2J3-217ENST00000513438 PIGBQ92521 554 aa18.47■□□□□ 0.55
POLR2J3-217ENST00000513438 SMARCC1Q92922 1105 aaPredicted RBP18.47■□□□□ 0.55
POLR2J3-217ENST00000513438 HSPA5P11021 654 aaKnown RBP18.46■□□□□ 0.55
POLR2J3-217ENST00000513438 EIF4G2P78344 907 aaKnown RBP eCLIP18.46■□□□□ 0.55
POLR2J3-217ENST00000513438 MSL1Q68DK7 614 aa18.46■□□□□ 0.55
POLR2J3-217ENST00000513438 FLAD1Q8NFF5 587 aa18.46■□□□□ 0.55
POLR2J3-217ENST00000513438 NLGN2Q8NFZ4 835 aa18.46■□□□□ 0.55
POLR2J3-217ENST00000513438 NCAPD2Q15021 1401 aa18.46■□□□□ 0.55
POLR2J3-217ENST00000513438 ITGB4P16144 1822 aa18.45■□□□□ 0.54
POLR2J3-217ENST00000513438 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.45■□□□□ 0.54
POLR2J3-217ENST00000513438 GIGYF1O75420 1035 aaPredicted RBP18.44■□□□□ 0.54
POLR2J3-217ENST00000513438 EIF4A2Q14240 407 aaKnown RBP18.44■□□□□ 0.54
POLR2J3-217ENST00000513438 PANK3Q9H999 370 aa18.44■□□□□ 0.54
POLR2J3-217ENST00000513438 PKD1L3Q7Z443 1732 aa18.43■□□□□ 0.54
POLR2J3-217ENST00000513438 IFNL2Q8IZJ0 200 aa18.43■□□□□ 0.54
POLR2J3-217ENST00000513438 C5P01031 1676 aa18.43■□□□□ 0.54
POLR2J3-217ENST00000513438 ANKRD26Q9UPS8 1709 aa18.43■□□□□ 0.54
POLR2J3-217ENST00000513438 TOGARAM1Q9Y4F4 1720 aa18.43■□□□□ 0.54
POLR2J3-217ENST00000513438 PHKG2P15735 406 aa18.42■□□□□ 0.54
POLR2J3-217ENST00000513438 AK7Q96M32 723 aa18.42■□□□□ 0.54
POLR2J3-217ENST00000513438 TAF1LQ8IZX4 1826 aa18.42■□□□□ 0.54
POLR2J3-217ENST00000513438 GOLGB1Q14789 3259 aaKnown RBP18.41■□□□□ 0.54
POLR2J3-217ENST00000513438 SMIM5Q71RC9 77 aa18.41■□□□□ 0.54
POLR2J3-217ENST00000513438 TMOD3Q9NYL9 352 aa18.41■□□□□ 0.54
POLR2J3-217ENST00000513438 LOC102724428A0A0B4J2F2 783 aa18.4■□□□□ 0.54
POLR2J3-217ENST00000513438 GRIN3BO60391 1043 aa18.4■□□□□ 0.54
POLR2J3-217ENST00000513438 SIK1P57059 783 aa18.4■□□□□ 0.54
POLR2J3-217ENST00000513438 AMIGO3Q86WK7 504 aa18.4■□□□□ 0.54
POLR2J3-217ENST00000513438 ASAP1Q9ULH1 1129 aa18.4■□□□□ 0.54
POLR2J3-217ENST00000513438 CCER1Q8TC90 406 aaPredicted RBP18.39■□□□□ 0.53
POLR2J3-217ENST00000513438 PHF14O94880 888 aa18.38■□□□□ 0.53
POLR2J3-217ENST00000513438 YBX3P16989 372 aaKnown RBP eCLIP18.38■□□□□ 0.53
POLR2J3-217ENST00000513438 LINC00116Q8NCU8 138 aa18.38■□□□□ 0.53
POLR2J3-217ENST00000513438 C4BP0C0L5 1744 aa18.37■□□□□ 0.53
POLR2J3-217ENST00000513438 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.37■□□□□ 0.53
POLR2J3-217ENST00000513438 ATP6V1AP38606 617 aa18.37■□□□□ 0.53
POLR2J3-217ENST00000513438 ATG3Q9NT62 314 aa18.37■□□□□ 0.53
POLR2J3-217ENST00000513438 CD2APQ9Y5K6 639 aa18.37■□□□□ 0.53
POLR2J3-217ENST00000513438 ITPK1Q13572 414 aa18.36■□□□□ 0.53
POLR2J3-217ENST00000513438 IGSF1Q8N6C5 1336 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms