RNA–Protein interactions for RNA: ENST00000513043.5

DDR1-270, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 604 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-270ENST00000513043 PRKRIP1Q9H875 184 aaPredicted RBP23.4■■□□□ 1.34
DDR1-270ENST00000513043 HMOX1P09601 288 aa23.39■■□□□ 1.33
DDR1-270ENST00000513043 ZCRB1Q8TBF4 217 aaKnown RBP23.39■■□□□ 1.33
DDR1-270ENST00000513043 RGPD1P0DJD0 1748 aa23.39■■□□□ 1.33
DDR1-270ENST00000513043 MYBBP1AQ9BQG0 1328 aaKnown RBP23.38■■□□□ 1.33
DDR1-270ENST00000513043 FAM196AQ6ZSG2 479 aa23.38■■□□□ 1.33
DDR1-270ENST00000513043 KDRP35968 1356 aa23.33■■□□□ 1.33
DDR1-270ENST00000513043 TRIM37O94972 964 aa23.33■■□□□ 1.33
DDR1-270ENST00000513043 NUDCQ9Y266 331 aa23.33■■□□□ 1.33
DDR1-270ENST00000513043 SHANK3Q9BYB0 1731 aa23.33■■□□□ 1.32
DDR1-270ENST00000513043 SPG7Q9UQ90 795 aa23.32■■□□□ 1.32
DDR1-270ENST00000513043 ANP32CO43423 234 aa23.31■■□□□ 1.32
DDR1-270ENST00000513043 ACSBG1Q96GR2 724 aa23.31■■□□□ 1.32
DDR1-270ENST00000513043 PCDH11XQ9BZA7 1347 aa23.31■■□□□ 1.32
DDR1-270ENST00000513043 PCDH11YQ9BZA8 1340 aa23.31■■□□□ 1.32
DDR1-270ENST00000513043 CYP27B1O15528 508 aa23.3■■□□□ 1.32
DDR1-270ENST00000513043 U2AF1L5P0DN76 240 aaPredicted RBP23.3■■□□□ 1.32
DDR1-270ENST00000513043 U2AF1Q01081 240 aaKnown RBP eCLIP23.3■■□□□ 1.32
DDR1-270ENST00000513043 PKD1L3Q7Z443 1732 aa23.3■■□□□ 1.32
DDR1-270ENST00000513043 SF3B2Q13435 895 aaKnown RBP23.29■■□□□ 1.32
DDR1-270ENST00000513043 PLEKHO1Q53GL0 409 aaPredicted RBP23.28■■□□□ 1.32
DDR1-270ENST00000513043 PTF1AQ7RTS3 328 aa23.28■■□□□ 1.32
DDR1-270ENST00000513043 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.27■■□□□ 1.32
DDR1-270ENST00000513043 KCNQ2O43526 872 aa23.26■■□□□ 1.31
DDR1-270ENST00000513043 ZNF530Q6P9A1 599 aaPredicted RBP23.26■■□□□ 1.31
DDR1-270ENST00000513043 CCDC125Q86Z20 511 aa23.26■■□□□ 1.31
DDR1-270ENST00000513043 BCL9O00512 1426 aa23.25■■□□□ 1.31
DDR1-270ENST00000513043 PRKAR2BP31323 418 aa23.24■■□□□ 1.31
DDR1-270ENST00000513043 AMOTQ4VCS5 1084 aa23.24■■□□□ 1.31
DDR1-270ENST00000513043 DEFB132Q7Z7B7 95 aa23.24■■□□□ 1.31
DDR1-270ENST00000513043 RSPH6AQ9H0K4 717 aa23.24■■□□□ 1.31
DDR1-270ENST00000513043 SBF2Q86WG5 1849 aa23.24■■□□□ 1.31
DDR1-270ENST00000513043 APBA3O96018 575 aa23.23■■□□□ 1.31
DDR1-270ENST00000513043 PHKG2P15735 406 aa23.23■■□□□ 1.31
DDR1-270ENST00000513043 IFNL2Q8IZJ0 200 aa23.23■■□□□ 1.31
DDR1-270ENST00000513043 SYTL4Q96C24 671 aaPredicted RBP23.23■■□□□ 1.31
DDR1-270ENST00000513043 TNS1Q9HBL0 1735 aaKnown RBP23.22■■□□□ 1.31
DDR1-270ENST00000513043 BCL11BQ9C0K0 894 aaPredicted RBP23.22■■□□□ 1.31
DDR1-270ENST00000513043 PLEKHG2Q9H7P9 1386 aa23.22■■□□□ 1.31
DDR1-270ENST00000513043 PRIM1P49642 420 aaKnown RBP23.21■■□□□ 1.31
DDR1-270ENST00000513043 DOT1LQ8TEK3 1739 aa23.21■■□□□ 1.31
DDR1-270ENST00000513043 KAT6BQ8WYB5 2073 aa23.2■■□□□ 1.3
DDR1-270ENST00000513043 BAG6P46379 1132 aa23.2■■□□□ 1.3
DDR1-270ENST00000513043 MTHFSDQ2M296 383 aaKnown RBP23.2■■□□□ 1.3
DDR1-270ENST00000513043 CCDC184Q52MB2 194 aa23.2■■□□□ 1.3
DDR1-270ENST00000513043 C1orf141Q5JVX7 400 aa23.2■■□□□ 1.3
DDR1-270ENST00000513043 FCHSD2O94868 740 aa23.19■■□□□ 1.3
DDR1-270ENST00000513043 EN1Q05925 392 aaPredicted RBP23.19■■□□□ 1.3
DDR1-270ENST00000513043 PHACTR3Q96KR7 559 aa23.19■■□□□ 1.3
DDR1-270ENST00000513043 SRCAPQ6ZRS2 3230 aa23.19■■□□□ 1.3
DDR1-270ENST00000513043 NHSQ6T4R5 1651 aa23.19■■□□□ 1.3
DDR1-270ENST00000513043 NKX1-1Q15270 411 aaPredicted RBP23.18■■□□□ 1.3
DDR1-270ENST00000513043 WDR43Q15061 677 aaKnown RBP eCLIP23.17■■□□□ 1.3
DDR1-270ENST00000513043 MPRIPQ6WCQ1 1025 aa23.16■■□□□ 1.3
DDR1-270ENST00000513043 TOGARAM1Q9Y4F4 1720 aa23.16■■□□□ 1.3
DDR1-270ENST00000513043 HSP90AB1P08238 724 aaKnown RBP23.14■■□□□ 1.29
DDR1-270ENST00000513043 EZH2Q15910 746 aaKnown RBP23.14■■□□□ 1.29
DDR1-270ENST00000513043 AKAP4Q5JQC9 854 aa23.14■■□□□ 1.29
DDR1-270ENST00000513043 KDM6AO15550 1401 aaPredicted RBP23.14■■□□□ 1.29
DDR1-270ENST00000513043 GAS2L2Q8NHY3 880 aa23.13■■□□□ 1.29
DDR1-270ENST00000513043 DCAF5Q96JK2 942 aa23.13■■□□□ 1.29
DDR1-270ENST00000513043 MRS2Q9HD23 443 aa23.13■■□□□ 1.29
DDR1-270ENST00000513043 BTAF1O14981 1849 aa23.12■■□□□ 1.29
DDR1-270ENST00000513043 NEFMP07197 916 aa23.11■■□□□ 1.29
DDR1-270ENST00000513043 CCDC146Q8IYE0 955 aa23.11■■□□□ 1.29
DDR1-270ENST00000513043 CAMKK2Q96RR4 588 aa23.11■■□□□ 1.29
DDR1-270ENST00000513043 PLEKHF1Q96S99 279 aa23.11■■□□□ 1.29
DDR1-270ENST00000513043 ADAMTS8Q9UP79 889 aa23.11■■□□□ 1.29
DDR1-270ENST00000513043 DIEXFQ68CQ4 756 aaKnown RBP23.1■■□□□ 1.29
DDR1-270ENST00000513043 LGR6Q9HBX8 967 aa23.1■■□□□ 1.29
DDR1-270ENST00000513043 TMOD3Q9NYL9 352 aa23.1■■□□□ 1.29
DDR1-270ENST00000513043 MAPK8IP3Q9UPT6 1336 aa23.09■■□□□ 1.29
DDR1-270ENST00000513043 PIGBQ92521 554 aa23.09■■□□□ 1.29
DDR1-270ENST00000513043 PNNQ9H307 717 aaKnown RBP23.09■■□□□ 1.29
DDR1-270ENST00000513043 MAP3K5Q99683 1374 aa23.09■■□□□ 1.29
DDR1-270ENST00000513043 ITGB4P16144 1822 aa23.08■■□□□ 1.29
DDR1-270ENST00000513043 PLSCR1O15162 318 aa23.08■■□□□ 1.29
DDR1-270ENST00000513043 CABP4P57796 275 aa23.08■■□□□ 1.29
DDR1-270ENST00000513043 GNAT3A8MTJ3 354 aa23.07■■□□□ 1.28
DDR1-270ENST00000513043 ERVV-2B6SEH9 535 aa23.07■■□□□ 1.28
DDR1-270ENST00000513043 RNMTO43148 476 aaKnown RBP23.07■■□□□ 1.28
DDR1-270ENST00000513043 TXNRD1Q16881 649 aa23.04■■□□□ 1.28
DDR1-270ENST00000513043 PROM2Q8N271 834 aa23.04■■□□□ 1.28
DDR1-270ENST00000513043 NFATC2IPQ8NCF5 419 aa23.04■■□□□ 1.28
DDR1-270ENST00000513043 SCN11AQ9UI33 1791 aa23.04■■□□□ 1.28
DDR1-270ENST00000513043 NFE2L2Q16236 605 aa23.03■■□□□ 1.28
DDR1-270ENST00000513043 IL17REQ8NFR9 667 aa23.03■■□□□ 1.28
DDR1-270ENST00000513043 ASAP1Q9ULH1 1129 aa23.03■■□□□ 1.28
DDR1-270ENST00000513043 KCNQ4P56696 695 aa23.02■■□□□ 1.28
DDR1-270ENST00000513043 DCTN1Q14203 1278 aa23.02■■□□□ 1.28
DDR1-270ENST00000513043 MCM10Q7L590 875 aa23.02■■□□□ 1.28
DDR1-270ENST00000513043 PNISRQ8TF01 805 aaKnown RBP23.02■■□□□ 1.28
DDR1-270ENST00000513043 RTF1Q92541 710 aaKnown RBP23.02■■□□□ 1.28
DDR1-270ENST00000513043 RUNDC1Q96C34 613 aa23.02■■□□□ 1.28
DDR1-270ENST00000513043 PALLDQ8WX93 1383 aa23.01■■□□□ 1.27
DDR1-270ENST00000513043 SLC52A2Q9HAB3 445 aa23.01■■□□□ 1.27
DDR1-270ENST00000513043 RRP7AQ9Y3A4 280 aaKnown RBP23.01■■□□□ 1.27
DDR1-270ENST00000513043 RGPD3A6NKT7 1758 aaPredicted RBP23.01■■□□□ 1.27
DDR1-270ENST00000513043 RGPD4Q7Z3J3 1758 aa23.01■■□□□ 1.27
DDR1-270ENST00000513043 ATG3Q9NT62 314 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms