RNA–Protein interactions for RNA: ENST00000512923.5

SSBP2-216, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-216ENST00000512923 RGPD2P0DJD1 1756 aa13.43□□□□□ -0.26
SSBP2-216ENST00000512923 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.43□□□□□ -0.26
SSBP2-216ENST00000512923 IL13P35225 146 aa13.42□□□□□ -0.26
SSBP2-216ENST00000512923 MEX3CQ5U5Q3 659 aaKnown RBP13.42□□□□□ -0.26
SSBP2-216ENST00000512923 ANKRD24Q8TF21 1146 aa13.42□□□□□ -0.26
SSBP2-216ENST00000512923 SLIT2O94813 1529 aa13.42□□□□□ -0.26
SSBP2-216ENST00000512923 U2SURPO15042 1029 aaKnown RBP13.41□□□□□ -0.26
SSBP2-216ENST00000512923 PNISRQ8TF01 805 aaKnown RBP13.41□□□□□ -0.26
SSBP2-216ENST00000512923 LTV1Q96GA3 475 aaPredicted RBP13.41□□□□□ -0.26
SSBP2-216ENST00000512923 BTG4Q9NY30 223 aa13.41□□□□□ -0.26
SSBP2-216ENST00000512923 C8orf37Q96NL8 207 aa13.4□□□□□ -0.26
SSBP2-216ENST00000512923 WDR17Q8IZU2 1322 aa13.4□□□□□ -0.26
SSBP2-216ENST00000512923 IGSF1Q8N6C5 1336 aa13.4□□□□□ -0.26
SSBP2-216ENST00000512923 U2AF1L5P0DN76 240 aaPredicted RBP13.39□□□□□ -0.27
SSBP2-216ENST00000512923 CSB-PGBD3P0DP91 1061 aa13.39□□□□□ -0.27
SSBP2-216ENST00000512923 EVA1CP58658 441 aa13.39□□□□□ -0.27
SSBP2-216ENST00000512923 U2AF1Q01081 240 aaKnown RBP eCLIP13.39□□□□□ -0.27
SSBP2-216ENST00000512923 FAM9BQ8IZU0 186 aa13.39□□□□□ -0.27
SSBP2-216ENST00000512923 NCAPD2Q15021 1401 aa13.39□□□□□ -0.27
SSBP2-216ENST00000512923 NGLY1Q96IV0 654 aa13.39□□□□□ -0.27
SSBP2-216ENST00000512923 STRN4Q9NRL3 753 aa13.39□□□□□ -0.27
SSBP2-216ENST00000512923 CRB1P82279 1406 aa13.38□□□□□ -0.27
SSBP2-216ENST00000512923 EYA1Q99502 592 aa13.38□□□□□ -0.27
SSBP2-216ENST00000512923 PNNQ9H307 717 aaKnown RBP13.38□□□□□ -0.27
SSBP2-216ENST00000512923 ADAMTS8Q9UP79 889 aa13.38□□□□□ -0.27
SSBP2-216ENST00000512923 WNK3Q9BYP7 1800 aa13.37□□□□□ -0.27
SSBP2-216ENST00000512923 PARP4Q9UKK3 1724 aaKnown RBP13.37□□□□□ -0.27
SSBP2-216ENST00000512923 KDRP35968 1356 aa13.37□□□□□ -0.27
SSBP2-216ENST00000512923 NBPF6Q5VWK0 638 aa13.37□□□□□ -0.27
SSBP2-216ENST00000512923 TOM1L2Q6ZVM7 507 aa13.37□□□□□ -0.27
SSBP2-216ENST00000512923 FNBP4Q8N3X1 1017 aaPredicted RBP13.37□□□□□ -0.27
SSBP2-216ENST00000512923 NBPF4Q96M43 638 aa13.37□□□□□ -0.27
SSBP2-216ENST00000512923 NLRP2Q9NX02 1062 aa13.37□□□□□ -0.27
SSBP2-216ENST00000512923 BCL9LQ86UU0 1499 aa13.36□□□□□ -0.27
SSBP2-216ENST00000512923 FCHSD2O94868 740 aa13.36□□□□□ -0.27
SSBP2-216ENST00000512923 HMOX1P09601 288 aa13.36□□□□□ -0.27
SSBP2-216ENST00000512923 SULT6B1Q6IMI4 303 aa13.36□□□□□ -0.27
SSBP2-216ENST00000512923 NEFMP07197 916 aa13.35□□□□□ -0.27
SSBP2-216ENST00000512923 LARP1Q6PKG0 1096 aaKnown RBP13.35□□□□□ -0.27
SSBP2-216ENST00000512923 UNC5CLQ8IV45 518 aa13.35□□□□□ -0.27
SSBP2-216ENST00000512923 RSPH6AQ9H0K4 717 aa13.35□□□□□ -0.27
SSBP2-216ENST00000512923 AFF2P51816 1311 aa13.34□□□□□ -0.27
SSBP2-216ENST00000512923 PLEKHG2Q9H7P9 1386 aa13.34□□□□□ -0.27
SSBP2-216ENST00000512923 NUBP1P53384 320 aa13.34□□□□□ -0.27
SSBP2-216ENST00000512923 USHBP1Q8N6Y0 703 aa13.34□□□□□ -0.27
SSBP2-216ENST00000512923 KIF12Q96FN5 646 aa13.34□□□□□ -0.27
SSBP2-216ENST00000512923 CARD10Q9BWT7 1032 aa13.34□□□□□ -0.27
SSBP2-216ENST00000512923 USP21Q9UK80 565 aa13.34□□□□□ -0.27
SSBP2-216ENST00000512923 MAPK8IP3Q9UPT6 1336 aa13.33□□□□□ -0.27
SSBP2-216ENST00000512923 PRKAR2BP31323 418 aa13.33□□□□□ -0.28
SSBP2-216ENST00000512923 AEBP1Q8IUX7 1158 aa13.33□□□□□ -0.28
SSBP2-216ENST00000512923 PELP1Q8IZL8 1130 aaKnown RBP13.33□□□□□ -0.28
SSBP2-216ENST00000512923 PKD1L3Q7Z443 1732 aa13.32□□□□□ -0.28
SSBP2-216ENST00000512923 CCDC146Q8IYE0 955 aa13.32□□□□□ -0.28
SSBP2-216ENST00000512923 RAPGEF4Q8WZA2 1011 aa13.32□□□□□ -0.28
SSBP2-216ENST00000512923 RUNDC1Q96C34 613 aa13.32□□□□□ -0.28
SSBP2-216ENST00000512923 ZBTB47Q9UFB7 747 aaPredicted RBP13.32□□□□□ -0.28
SSBP2-216ENST00000512923 VPS72Q15906 364 aa13.31□□□□□ -0.28
SSBP2-216ENST00000512923 ILDR1Q86SU0 546 aaPredicted RBP13.31□□□□□ -0.28
SSBP2-216ENST00000512923 PLEKHF1Q96S99 279 aa13.31□□□□□ -0.28
SSBP2-216ENST00000512923 FBXO3Q9UK99 471 aa13.31□□□□□ -0.28
SSBP2-216ENST00000512923 THRAP3Q9Y2W1 955 aaKnown RBP13.31□□□□□ -0.28
SSBP2-216ENST00000512923 CCDC9Q9Y3X0 531 aaKnown RBP13.31□□□□□ -0.28
SSBP2-216ENST00000512923 MEGF6O75095 1541 aa13.31□□□□□ -0.28
SSBP2-216ENST00000512923 SPATA31A1Q5TZJ5 1347 aa13.31□□□□□ -0.28
SSBP2-216ENST00000512923 SPATA31A5Q5VU36 1347 aa13.31□□□□□ -0.28
SSBP2-216ENST00000512923 SPATA31A7Q8IWB4 1347 aa13.31□□□□□ -0.28
SSBP2-216ENST00000512923 ATRNO75882 1429 aa13.3□□□□□ -0.28
SSBP2-216ENST00000512923 TATP17735 454 aaPredicted RBP13.3□□□□□ -0.28
SSBP2-216ENST00000512923 USP35Q9P2H5 1018 aa13.3□□□□□ -0.28
SSBP2-216ENST00000512923 OVOS2A0A0G2JMS6 1433 aa13.29□□□□□ -0.28
SSBP2-216ENST00000512923 MAP3K13O43283 966 aa13.29□□□□□ -0.28
SSBP2-216ENST00000512923 IL2RBP14784 551 aa13.29□□□□□ -0.28
SSBP2-216ENST00000512923 TCP11L2Q8N4U5 519 aa13.29□□□□□ -0.28
SSBP2-216ENST00000512923 TRPC5Q9UL62 973 aaPredicted RBP13.29□□□□□ -0.28
SSBP2-216ENST00000512923 TRPC6Q9Y210 931 aa13.29□□□□□ -0.28
SSBP2-216ENST00000512923 DISP2A7MBM2 1401 aa13.28□□□□□ -0.28
SSBP2-216ENST00000512923 DLG5Q8TDM6 1919 aa13.28□□□□□ -0.28
SSBP2-216ENST00000512923 GLI3P10071 1580 aa13.28□□□□□ -0.28
SSBP2-216ENST00000512923 ZNF772Q68DY9 489 aaPredicted RBP13.28□□□□□ -0.28
SSBP2-216ENST00000512923 LRRC37A3O60309 1634 aa13.27□□□□□ -0.28
SSBP2-216ENST00000512923 SHANK3Q9BYB0 1731 aa13.27□□□□□ -0.28
SSBP2-216ENST00000512923 AMOTQ4VCS5 1084 aa13.27□□□□□ -0.29
SSBP2-216ENST00000512923 GAS2L2Q8NHY3 880 aa13.27□□□□□ -0.29
SSBP2-216ENST00000512923 CDCA7Q9BWT1 371 aaPredicted RBP13.27□□□□□ -0.29
SSBP2-216ENST00000512923 THSD7AQ9UPZ6 1657 aa13.27□□□□□ -0.29
SSBP2-216ENST00000512923 APAF1O14727 1248 aa13.26□□□□□ -0.29
SSBP2-216ENST00000512923 ATMINO43313 823 aaPredicted RBP13.26□□□□□ -0.29
SSBP2-216ENST00000512923 HNRNPUQ00839 825 aaKnown RBP eCLIP13.26□□□□□ -0.29
SSBP2-216ENST00000512923 PLEKHO1Q53GL0 409 aaPredicted RBP13.26□□□□□ -0.29
SSBP2-216ENST00000512923 ASTLQ6HA08 431 aaPredicted RBP13.26□□□□□ -0.29
SSBP2-216ENST00000512923 BARGINQ6ZT62 677 aa13.26□□□□□ -0.29
SSBP2-216ENST00000512923 PHACTR3Q96KR7 559 aa13.26□□□□□ -0.29
SSBP2-216ENST00000512923 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.26□□□□□ -0.29
SSBP2-216ENST00000512923 SPG7Q9UQ90 795 aa13.26□□□□□ -0.29
SSBP2-216ENST00000512923 NFE2L2Q16236 605 aa13.25□□□□□ -0.29
SSBP2-216ENST00000512923 TNS2Q63HR2 1409 aa13.25□□□□□ -0.29
SSBP2-216ENST00000512923 NGEFQ8N5V2 710 aa13.25□□□□□ -0.29
SSBP2-216ENST00000512923 GJD4Q96KN9 370 aaPredicted RBP13.25□□□□□ -0.29
SSBP2-216ENST00000512923 VIRMAQ69YN4 1812 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms