RNA–Protein interactions for RNA: ENST00000512878.1

RHOBTB3-213, Transcript of Rho related BTB domain containing 3, humanhuman

TSL 2

Gene RHOBTB3, Length 483 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOBTB3-213ENST00000512878 NBPF4Q96M43 638 aa17.71■□□□□ 0.43
RHOBTB3-213ENST00000512878 PDGFDQ9GZP0 370 aaPredicted RBP17.71■□□□□ 0.43
RHOBTB3-213ENST00000512878 PKD1L3Q7Z443 1732 aa17.71■□□□□ 0.43
RHOBTB3-213ENST00000512878 PANK3Q9H999 370 aa17.7■□□□□ 0.42
RHOBTB3-213ENST00000512878 SMG6Q86US8 1419 aaKnown RBP17.7■□□□□ 0.42
RHOBTB3-213ENST00000512878 CASZ1Q86V15 1759 aa17.69■□□□□ 0.42
RHOBTB3-213ENST00000512878 TXNRD1Q16881 649 aa17.69■□□□□ 0.42
RHOBTB3-213ENST00000512878 ITGB4P16144 1822 aa17.69■□□□□ 0.42
RHOBTB3-213ENST00000512878 NCAPD2Q15021 1401 aa17.69■□□□□ 0.42
RHOBTB3-213ENST00000512878 LY75O60449 1722 aa17.68■□□□□ 0.42
RHOBTB3-213ENST00000512878 PAPPAQ13219 1627 aa17.67■□□□□ 0.42
RHOBTB3-213ENST00000512878 POLKQ9UBT6 870 aa17.66■□□□□ 0.42
RHOBTB3-213ENST00000512878 TOGARAM1Q9Y4F4 1720 aa17.66■□□□□ 0.42
RHOBTB3-213ENST00000512878 KIF7Q2M1P5 1343 aa17.66■□□□□ 0.42
RHOBTB3-213ENST00000512878 WASHC2AQ641Q2 1341 aa17.66■□□□□ 0.42
RHOBTB3-213ENST00000512878 TUBGCP6Q96RT7 1819 aa17.64■□□□□ 0.41
RHOBTB3-213ENST00000512878 ZCRB1Q8TBF4 217 aaKnown RBP17.64■□□□□ 0.41
RHOBTB3-213ENST00000512878 NSD2O96028 1365 aa17.64■□□□□ 0.41
RHOBTB3-213ENST00000512878 PPM1GO15355 546 aaPredicted RBP17.63■□□□□ 0.41
RHOBTB3-213ENST00000512878 QSER1Q2KHR3 1735 aa17.62■□□□□ 0.41
RHOBTB3-213ENST00000512878 TNNT2P45379 298 aaPredicted RBP17.62■□□□□ 0.41
RHOBTB3-213ENST00000512878 LRRC4BQ9NT99 713 aa17.62■□□□□ 0.41
RHOBTB3-213ENST00000512878 PRIM1P49642 420 aaKnown RBP17.61■□□□□ 0.41
RHOBTB3-213ENST00000512878 KCNQ4P56696 695 aa17.61■□□□□ 0.41
RHOBTB3-213ENST00000512878 TAF1LQ8IZX4 1826 aa17.61■□□□□ 0.41
RHOBTB3-213ENST00000512878 UTRNP46939 3433 aa17.6■□□□□ 0.41
RHOBTB3-213ENST00000512878 ZBTB7AO95365 584 aa17.6■□□□□ 0.41
RHOBTB3-213ENST00000512878 SLC15A2Q16348 729 aa17.6■□□□□ 0.41
RHOBTB3-213ENST00000512878 ZNF827Q17R98 1081 aa17.6■□□□□ 0.41
RHOBTB3-213ENST00000512878 RAPGEF4Q8WZA2 1011 aa17.6■□□□□ 0.41
RHOBTB3-213ENST00000512878 SYTL4Q96C24 671 aaPredicted RBP17.6■□□□□ 0.41
RHOBTB3-213ENST00000512878 TATP17735 454 aaPredicted RBP17.59■□□□□ 0.41
RHOBTB3-213ENST00000512878 EYA1Q99502 592 aa17.59■□□□□ 0.41
RHOBTB3-213ENST00000512878 SPON1Q9HCB6 807 aa17.59■□□□□ 0.41
RHOBTB3-213ENST00000512878 STK32BQ9NY57 414 aa17.59■□□□□ 0.41
RHOBTB3-213ENST00000512878 AMER1Q5JTC6 1135 aaPredicted RBP17.58■□□□□ 0.4
RHOBTB3-213ENST00000512878 VIRMAQ69YN4 1812 aaKnown RBP17.58■□□□□ 0.4
RHOBTB3-213ENST00000512878 PER1O15534 1290 aaPredicted RBP17.57■□□□□ 0.4
RHOBTB3-213ENST00000512878 EIF4A2Q14240 407 aaKnown RBP17.57■□□□□ 0.4
RHOBTB3-213ENST00000512878 ATF5Q9Y2D1 282 aaPredicted RBP17.57■□□□□ 0.4
RHOBTB3-213ENST00000512878 PCDH11XQ9BZA7 1347 aa17.56■□□□□ 0.4
RHOBTB3-213ENST00000512878 PCDH11YQ9BZA8 1340 aa17.56■□□□□ 0.4
RHOBTB3-213ENST00000512878 CYP27B1O15528 508 aa17.56■□□□□ 0.4
RHOBTB3-213ENST00000512878 KNSTRNQ9Y448 316 aa17.56■□□□□ 0.4
RHOBTB3-213ENST00000512878 C5P01031 1676 aa17.55■□□□□ 0.4
RHOBTB3-213ENST00000512878 PTGER2P43116 358 aa17.54■□□□□ 0.4
RHOBTB3-213ENST00000512878 MORC1Q86VD1 984 aa17.54■□□□□ 0.4
RHOBTB3-213ENST00000512878 COL24A1Q17RW2 1714 aa17.54■□□□□ 0.4
RHOBTB3-213ENST00000512878 IGSF1Q8N6C5 1336 aa17.53■□□□□ 0.4
RHOBTB3-213ENST00000512878 PPP1R1BQ9UD71 204 aaPredicted RBP17.53■□□□□ 0.4
RHOBTB3-213ENST00000512878 GOLGB1Q14789 3259 aaKnown RBP17.52■□□□□ 0.4
RHOBTB3-213ENST00000512878 AKT1S1Q96B36 256 aa17.52■□□□□ 0.4
RHOBTB3-213ENST00000512878 PLEKHG2Q9H7P9 1386 aa17.51■□□□□ 0.39
RHOBTB3-213ENST00000512878 NKX1-1Q15270 411 aaPredicted RBP17.5■□□□□ 0.39
RHOBTB3-213ENST00000512878 SLC27A3Q5K4L6 730 aa17.5■□□□□ 0.39
RHOBTB3-213ENST00000512878 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.5■□□□□ 0.391e-8■□□□□ 8.5
RHOBTB3-213ENST00000512878 SGIP1Q9BQI5 828 aa17.49■□□□□ 0.39
RHOBTB3-213ENST00000512878 SCN11AQ9UI33 1791 aa17.48■□□□□ 0.39
RHOBTB3-213ENST00000512878 MPRIPQ6WCQ1 1025 aa17.48■□□□□ 0.39
RHOBTB3-213ENST00000512878 CCNL1Q9UK58 526 aaPredicted RBP17.48■□□□□ 0.39
RHOBTB3-213ENST00000512878 SPG7Q9UQ90 795 aa17.48■□□□□ 0.39
RHOBTB3-213ENST00000512878 UBR3Q6ZT12 1888 aa17.48■□□□□ 0.39
RHOBTB3-213ENST00000512878 PNPLA7Q6ZV29 1317 aa17.47■□□□□ 0.39
RHOBTB3-213ENST00000512878 MTFR1LQ9H019 292 aa17.47■□□□□ 0.39
RHOBTB3-213ENST00000512878 NPC1L1Q9UHC9 1359 aa17.47■□□□□ 0.39
RHOBTB3-213ENST00000512878 KDRP35968 1356 aa17.46■□□□□ 0.39
RHOBTB3-213ENST00000512878 PHKG2P15735 406 aa17.46■□□□□ 0.39
RHOBTB3-213ENST00000512878 PALLDQ8WX93 1383 aa17.45■□□□□ 0.38
RHOBTB3-213ENST00000512878 IL13P35225 146 aa17.45■□□□□ 0.38
RHOBTB3-213ENST00000512878 CC2D1BQ5T0F9 858 aaKnown RBP17.45■□□□□ 0.38
RHOBTB3-213ENST00000512878 AEBP1Q8IUX7 1158 aa17.45■□□□□ 0.38
RHOBTB3-213ENST00000512878 PIGBQ92521 554 aa17.45■□□□□ 0.38
RHOBTB3-213ENST00000512878 C4BP0C0L5 1744 aa17.44■□□□□ 0.38
RHOBTB3-213ENST00000512878 MTHFSP49914 203 aa17.44■□□□□ 0.38
RHOBTB3-213ENST00000512878 IFNL2Q8IZJ0 200 aa17.44■□□□□ 0.38
RHOBTB3-213ENST00000512878 FHDC1Q9C0D6 1143 aaPredicted RBP17.44■□□□□ 0.38
RHOBTB3-213ENST00000512878 TFCP2L1Q9NZI6 479 aa17.44■□□□□ 0.38
RHOBTB3-213ENST00000512878 COL3A1P02461 1466 aaPredicted RBP17.43■□□□□ 0.38
RHOBTB3-213ENST00000512878 ZNF831Q5JPB2 1677 aa17.42■□□□□ 0.38
RHOBTB3-213ENST00000512878 SMIM5Q71RC9 77 aa17.42■□□□□ 0.38
RHOBTB3-213ENST00000512878 AMIGO3Q86WK7 504 aa17.42■□□□□ 0.38
RHOBTB3-213ENST00000512878 COL5A3P25940 1745 aaPredicted RBP17.41■□□□□ 0.38
RHOBTB3-213ENST00000512878 KDM6AO15550 1401 aaPredicted RBP17.41■□□□□ 0.38
RHOBTB3-213ENST00000512878 CNGB1Q14028 1251 aaPredicted RBP17.4■□□□□ 0.38
RHOBTB3-213ENST00000512878 SULT6B1Q6IMI4 303 aa17.4■□□□□ 0.38
RHOBTB3-213ENST00000512878 COL23A1Q86Y22 540 aaPredicted RBP17.4■□□□□ 0.38
RHOBTB3-213ENST00000512878 ARXQ96QS3 562 aa17.4■□□□□ 0.38
RHOBTB3-213ENST00000512878 SYT17Q9BSW7 474 aa17.4■□□□□ 0.38
RHOBTB3-213ENST00000512878 MYH14Q7Z406 1995 aaKnown RBP17.4■□□□□ 0.38
RHOBTB3-213ENST00000512878 ASAP1Q9ULH1 1129 aa17.39■□□□□ 0.37
RHOBTB3-213ENST00000512878 ADAMTS7Q9UKP4 1686 aa17.39■□□□□ 0.37
RHOBTB3-213ENST00000512878 AMOTQ4VCS5 1084 aa17.38■□□□□ 0.37
RHOBTB3-213ENST00000512878 PLEKHO1Q53GL0 409 aaPredicted RBP17.38■□□□□ 0.37
RHOBTB3-213ENST00000512878 MSL1Q68DK7 614 aa17.37■□□□□ 0.37
RHOBTB3-213ENST00000512878 SMARCC1Q92922 1105 aaPredicted RBP17.37■□□□□ 0.37
RHOBTB3-213ENST00000512878 TMOD3Q9NYL9 352 aa17.37■□□□□ 0.37
RHOBTB3-213ENST00000512878 MSH5O43196 834 aa17.36■□□□□ 0.37
RHOBTB3-213ENST00000512878 ZNF530Q6P9A1 599 aaPredicted RBP17.36■□□□□ 0.37
RHOBTB3-213ENST00000512878 LINC00116Q8NCU8 138 aa17.36■□□□□ 0.37
RHOBTB3-213ENST00000512878 DCAF5Q96JK2 942 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms