RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 NCOA4Q13772 614 aa10.56□□□□□ -0.72
CHD1-209ENST00000512844 MRPL14Q6P1L8 145 aaKnown RBP10.56□□□□□ -0.72
CHD1-209ENST00000512844 USP17L2Q6R6M4 530 aa10.56□□□□□ -0.72
CHD1-209ENST00000512844 USP17L1Q7RTZ2 530 aa10.56□□□□□ -0.72
CHD1-209ENST00000512844 TRIM50Q86XT4 487 aa10.56□□□□□ -0.72
CHD1-209ENST00000512844 DEPDC4Q8N2C3 294 aa10.56□□□□□ -0.72
CHD1-209ENST00000512844 CHIC2Q9UKJ5 165 aa10.56□□□□□ -0.72
CHD1-209ENST00000512844 LILRA1O75019 489 aa10.55□□□□□ -0.72
CHD1-209ENST00000512844 LMOD1P29536 600 aaPredicted RBP10.55□□□□□ -0.72
CHD1-209ENST00000512844 RELBQ01201 579 aa10.55□□□□□ -0.72
CHD1-209ENST00000512844 PSME1Q06323 249 aa10.55□□□□□ -0.72
CHD1-209ENST00000512844 C6orf118Q5T5N4 469 aa10.55□□□□□ -0.72
CHD1-209ENST00000512844 Q6ZVU0 165 aa10.55□□□□□ -0.72
CHD1-209ENST00000512844 PLEKHM2Q8IWE5 1019 aa10.55□□□□□ -0.72
CHD1-209ENST00000512844 LINC00528Q8N1L1 170 aa10.55□□□□□ -0.72
CHD1-209ENST00000512844 BMP1P13497 986 aa10.54□□□□□ -0.72
CHD1-209ENST00000512844 SCTRP47872 440 aa10.54□□□□□ -0.72
CHD1-209ENST00000512844 TSGA10IPQ3SY00 556 aa10.54□□□□□ -0.72
CHD1-209ENST00000512844 SENP2Q9HC62 589 aa10.54□□□□□ -0.72
CHD1-209ENST00000512844 ATP13A2Q9NQ11 1180 aa10.54□□□□□ -0.72
CHD1-209ENST00000512844 RBM19Q9Y4C8 960 aaKnown RBP10.54□□□□□ -0.72
CHD1-209ENST00000512844 ATP1A2P50993 1020 aa10.53□□□□□ -0.72
CHD1-209ENST00000512844 MAFBQ9Y5Q3 323 aaPredicted RBP10.53□□□□□ -0.72
CHD1-209ENST00000512844 ESCO1Q5FWF5 840 aa10.52□□□□□ -0.73
CHD1-209ENST00000512844 CCDC82Q8N4S0 544 aa10.52□□□□□ -0.73
CHD1-209ENST00000512844 AGBL1Q96MI9 1066 aa10.52□□□□□ -0.73
CHD1-209ENST00000512844 PURBQ96QR8 312 aaKnown RBP10.52□□□□□ -0.73
CHD1-209ENST00000512844 RFX1P22670 979 aa10.51□□□□□ -0.73
CHD1-209ENST00000512844 ADD1P35611 737 aaKnown RBP10.51□□□□□ -0.73
CHD1-209ENST00000512844 PTGIRP43119 386 aa10.51□□□□□ -0.73
CHD1-209ENST00000512844 KIFC2Q96AC6 838 aa10.51□□□□□ -0.73
CHD1-209ENST00000512844 NLRP3Q96P20 1036 aa10.51□□□□□ -0.73
CHD1-209ENST00000512844 OSBPL3Q9H4L5 887 aa10.51□□□□□ -0.73
CHD1-209ENST00000512844 LCE2BO14633 110 aa10.5□□□□□ -0.73
CHD1-209ENST00000512844 GNRH1P01148 92 aa10.5□□□□□ -0.73
CHD1-209ENST00000512844 GTF2IP78347 998 aa10.5□□□□□ -0.73
CHD1-209ENST00000512844 ZNF395Q9H8N7 513 aaPredicted RBP10.5□□□□□ -0.73
CHD1-209ENST00000512844 POLMQ9NP87 494 aaPredicted RBP10.5□□□□□ -0.73
CHD1-209ENST00000512844 MKRN1Q9UHC7 482 aaKnown RBP10.5□□□□□ -0.73
CHD1-209ENST00000512844 MEN1O00255 615 aa10.49□□□□□ -0.73
CHD1-209ENST00000512844 LARP1Q6PKG0 1096 aaKnown RBP10.49□□□□□ -0.73
CHD1-209ENST00000512844 VRTNQ9H8Y1 702 aa10.49□□□□□ -0.73
CHD1-209ENST00000512844 GTF2E1P29083 439 aaPredicted RBP10.48□□□□□ -0.73
CHD1-209ENST00000512844 TRIM46Q7Z4K8 759 aa10.48□□□□□ -0.73
CHD1-209ENST00000512844 ARHGEF10LQ9HCE6 1279 aa10.48□□□□□ -0.73
CHD1-209ENST00000512844 RASA1P20936 1047 aa10.47□□□□□ -0.73
CHD1-209ENST00000512844 ZFP42Q96MM3 310 aa10.47□□□□□ -0.73
CHD1-209ENST00000512844 ARID3AQ99856 593 aa10.47□□□□□ -0.73
CHD1-209ENST00000512844 SPINT1O43278 529 aa10.46□□□□□ -0.73
CHD1-209ENST00000512844 DNAAF2Q9NVR5 837 aaKnown RBP10.46□□□□□ -0.73
CHD1-209ENST00000512844 DACH1Q9UI36 760 aa10.46□□□□□ -0.73
CHD1-209ENST00000512844 A0A1W2PRU2 124 aa10.45□□□□□ -0.74
CHD1-209ENST00000512844 C11orf95C9JLR9 678 aaPredicted RBP10.45□□□□□ -0.74
CHD1-209ENST00000512844 CFAP70Q5T0N1 1121 aa10.45□□□□□ -0.74
CHD1-209ENST00000512844 OGFOD1Q8N543 542 aa10.45□□□□□ -0.74
CHD1-209ENST00000512844 INSM2Q96T92 566 aaPredicted RBP10.45□□□□□ -0.74
CHD1-209ENST00000512844 RAB6BQ9NRW1 208 aa10.45□□□□□ -0.74
CHD1-209ENST00000512844 GMPR2Q9P2T1 348 aaKnown RBP10.45□□□□□ -0.74
CHD1-209ENST00000512844 TTLL8A6PVC2 850 aa10.44□□□□□ -0.74
CHD1-209ENST00000512844 MAN1A2O60476 641 aa10.44□□□□□ -0.74
CHD1-209ENST00000512844 SLC27A3Q5K4L6 730 aa10.44□□□□□ -0.74
CHD1-209ENST00000512844 C1orf115Q9H7X2 142 aa10.44□□□□□ -0.74
CHD1-209ENST00000512844 GDF10P55107 478 aa10.43□□□□□ -0.74
CHD1-209ENST00000512844 CLN3Q13286 438 aa10.43□□□□□ -0.74
CHD1-209ENST00000512844 LARGE2Q8N3Y3 721 aa10.43□□□□□ -0.74
CHD1-209ENST00000512844 ZNF594Q96JF6 807 aaPredicted RBP10.43□□□□□ -0.74
CHD1-209ENST00000512844 BACH1O14867 736 aa10.42□□□□□ -0.74
CHD1-209ENST00000512844 TPCN2Q8NHX9 752 aa10.42□□□□□ -0.74
CHD1-209ENST00000512844 CNKSR1Q969H4 720 aa10.42□□□□□ -0.74
CHD1-209ENST00000512844 TRIM47Q96LD4 638 aa10.42□□□□□ -0.74
CHD1-209ENST00000512844 CDCA8Q53HL2 280 aa10.41□□□□□ -0.74
CHD1-209ENST00000512844 CCDC102BQ68D86 513 aa10.41□□□□□ -0.74
CHD1-209ENST00000512844 PBXIP1Q96AQ6 731 aa10.41□□□□□ -0.74
CHD1-209ENST00000512844 ESYT1Q9BSJ8 1104 aa10.41□□□□□ -0.74
CHD1-209ENST00000512844 PCDHGA11Q9Y5H2 935 aa10.41□□□□□ -0.74
CHD1-209ENST00000512844 GPC1P35052 558 aa10.4□□□□□ -0.74
CHD1-209ENST00000512844 TLR1Q15399 786 aa10.4□□□□□ -0.74
CHD1-209ENST00000512844 ZNF787Q6DD87 383 aa10.4□□□□□ -0.74
CHD1-209ENST00000512844 ETNK1Q9HBU6 452 aa10.4□□□□□ -0.74
CHD1-209ENST00000512844 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.39□□□□□ -0.75
CHD1-209ENST00000512844 FAM196BA6NMK8 535 aa10.39□□□□□ -0.75
CHD1-209ENST00000512844 INHAP05111 366 aa10.39□□□□□ -0.75
CHD1-209ENST00000512844 CTSOP43234 321 aaPredicted RBP10.39□□□□□ -0.75
CHD1-209ENST00000512844 CLDN10P78369 228 aa10.39□□□□□ -0.75
CHD1-209ENST00000512844 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.39□□□□□ -0.75
CHD1-209ENST00000512844 KANK4Q5T7N3 995 aaPredicted RBP10.39□□□□□ -0.75
CHD1-209ENST00000512844 KDF1Q8NAX2 398 aaPredicted RBP10.39□□□□□ -0.75
CHD1-209ENST00000512844 SERTAD1Q9UHV2 236 aa10.39□□□□□ -0.75
CHD1-209ENST00000512844 SOS2Q07890 1332 aaPredicted RBP10.38□□□□□ -0.75
CHD1-209ENST00000512844 ACIN1Q9UKV3 1341 aaKnown RBP10.38□□□□□ -0.75
CHD1-209ENST00000512844 FIGNL2A6NMB9 653 aa10.38□□□□□ -0.75
CHD1-209ENST00000512844 USP17L15C9J2P7 530 aa10.38□□□□□ -0.75
CHD1-209ENST00000512844 USP17L10C9JJH3 530 aa10.38□□□□□ -0.75
CHD1-209ENST00000512844 USP17L13C9JLJ4 530 aa10.38□□□□□ -0.75
CHD1-209ENST00000512844 USP17L12C9JPN9 530 aa10.38□□□□□ -0.75
CHD1-209ENST00000512844 USP17L11C9JVI0 530 aa10.38□□□□□ -0.75
CHD1-209ENST00000512844 USP17L21D6R901 530 aa10.38□□□□□ -0.75
CHD1-209ENST00000512844 USP17L18D6R9N7 530 aa10.38□□□□□ -0.75
CHD1-209ENST00000512844 USP17L22D6RA61 530 aa10.38□□□□□ -0.75
CHD1-209ENST00000512844 USP17L17D6RBQ6 530 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms