RNA–Protein interactions for RNA: ENST00000512669.1

LETM1-207, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 966 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-207ENST00000512669 TMF1P82094 1093 aa20.33■□□□□ 0.85
LETM1-207ENST00000512669 DOT1LQ8TEK3 1739 aa20.33■□□□□ 0.84
LETM1-207ENST00000512669 AMPHP49418 695 aa20.32■□□□□ 0.84
LETM1-207ENST00000512669 CCER1Q8TC90 406 aaPredicted RBP20.32■□□□□ 0.84
LETM1-207ENST00000512669 LTV1Q96GA3 475 aaPredicted RBP20.32■□□□□ 0.84
LETM1-207ENST00000512669 TFCP2L1Q9NZI6 479 aa20.32■□□□□ 0.84
LETM1-207ENST00000512669 LY75O60449 1722 aa20.32■□□□□ 0.84
LETM1-207ENST00000512669 CGNL1Q0VF96 1302 aa20.31■□□□□ 0.84
LETM1-207ENST00000512669 MAP3K19Q56UN5 1328 aa20.31■□□□□ 0.84
LETM1-207ENST00000512669 HOXC9P31274 260 aa20.31■□□□□ 0.84
LETM1-207ENST00000512669 GPR162Q16538 588 aa20.31■□□□□ 0.84
LETM1-207ENST00000512669 SYTL4Q96C24 671 aaPredicted RBP20.31■□□□□ 0.84
LETM1-207ENST00000512669 PNPLA7Q6ZV29 1317 aa20.3■□□□□ 0.84
LETM1-207ENST00000512669 ZCRB1Q8TBF4 217 aaKnown RBP20.3■□□□□ 0.84
LETM1-207ENST00000512669 PRIM1P49642 420 aaKnown RBP20.29■□□□□ 0.84
LETM1-207ENST00000512669 TUBGCP6Q96RT7 1819 aa20.29■□□□□ 0.84
LETM1-207ENST00000512669 SMG6Q86US8 1419 aaKnown RBP20.28■□□□□ 0.84
LETM1-207ENST00000512669 SHANK3Q9BYB0 1731 aa20.28■□□□□ 0.84
LETM1-207ENST00000512669 NSD2O96028 1365 aa20.27■□□□□ 0.84
LETM1-207ENST00000512669 FBLN1P23142 703 aa20.27■□□□□ 0.84
LETM1-207ENST00000512669 C1QTNF8P60827 252 aa20.26■□□□□ 0.83
LETM1-207ENST00000512669 KLHL34Q8N239 644 aa20.26■□□□□ 0.83
LETM1-207ENST00000512669 CCNL1Q9UK58 526 aaPredicted RBP20.26■□□□□ 0.83
LETM1-207ENST00000512669 MEGF6O75095 1541 aa20.26■□□□□ 0.83
LETM1-207ENST00000512669 RGPD2P0DJD1 1756 aa20.24■□□□□ 0.83
LETM1-207ENST00000512669 FYB1O15117 783 aa20.24■□□□□ 0.83
LETM1-207ENST00000512669 CARD14Q9BXL6 1004 aa20.24■□□□□ 0.83
LETM1-207ENST00000512669 RAPGEF4Q8WZA2 1011 aa20.23■□□□□ 0.83
LETM1-207ENST00000512669 KIF24Q5T7B8 1368 aa20.22■□□□□ 0.83
LETM1-207ENST00000512669 SENP3-EIF4A1A0A087X0R7 540 aa20.22■□□□□ 0.83
LETM1-207ENST00000512669 GRIN3BO60391 1043 aa20.22■□□□□ 0.83
LETM1-207ENST00000512669 CDCA8Q53HL2 280 aa20.22■□□□□ 0.83
LETM1-207ENST00000512669 PCDH11XQ9BZA7 1347 aa20.21■□□□□ 0.83
LETM1-207ENST00000512669 PCDH11YQ9BZA8 1340 aa20.21■□□□□ 0.83
LETM1-207ENST00000512669 TATP17735 454 aaPredicted RBP20.2■□□□□ 0.82
LETM1-207ENST00000512669 KCNQ4P56696 695 aa20.2■□□□□ 0.82
LETM1-207ENST00000512669 PELP1Q8IZL8 1130 aaKnown RBP20.2■□□□□ 0.82
LETM1-207ENST00000512669 FLAD1Q8NFF5 587 aa20.2■□□□□ 0.82
LETM1-207ENST00000512669 GGNBP2Q9H3C7 697 aa20.2■□□□□ 0.82
LETM1-207ENST00000512669 C5P01031 1676 aa20.19■□□□□ 0.82
LETM1-207ENST00000512669 GIGYF1O75420 1035 aaPredicted RBP20.19■□□□□ 0.82
LETM1-207ENST00000512669 HSPA5P11021 654 aaKnown RBP20.19■□□□□ 0.82
LETM1-207ENST00000512669 RRS1Q15050 365 aaKnown RBP20.19■□□□□ 0.82
LETM1-207ENST00000512669 NBPF6Q5VWK0 638 aa20.19■□□□□ 0.82
LETM1-207ENST00000512669 NBPF4Q96M43 638 aa20.19■□□□□ 0.82
LETM1-207ENST00000512669 INSRP06213 1382 aa20.19■□□□□ 0.82
LETM1-207ENST00000512669 MSH5O43196 834 aa20.18■□□□□ 0.82
LETM1-207ENST00000512669 FLT4P35916 1363 aa20.18■□□□□ 0.82
LETM1-207ENST00000512669 GOLGB1Q14789 3259 aaKnown RBP20.17■□□□□ 0.82
LETM1-207ENST00000512669 NLGN2Q8NFZ4 835 aa20.17■□□□□ 0.82
LETM1-207ENST00000512669 KIF20BQ96Q89 1820 aa20.17■□□□□ 0.82
LETM1-207ENST00000512669 COL23A1Q86Y22 540 aaPredicted RBP20.16■□□□□ 0.82
LETM1-207ENST00000512669 EIF4G2P78344 907 aaKnown RBP eCLIP20.15■□□□□ 0.82
LETM1-207ENST00000512669 NSD3Q9BZ95 1437 aa20.14■□□□□ 0.81
LETM1-207ENST00000512669 PALLDQ8WX93 1383 aa20.14■□□□□ 0.81
LETM1-207ENST00000512669 USHBP1Q8N6Y0 703 aa20.14■□□□□ 0.81
LETM1-207ENST00000512669 SMARCC1Q92922 1105 aaPredicted RBP20.14■□□□□ 0.81
LETM1-207ENST00000512669 CD2APQ9Y5K6 639 aa20.14■□□□□ 0.81
LETM1-207ENST00000512669 TAF1LQ8IZX4 1826 aa20.13■□□□□ 0.81
LETM1-207ENST00000512669 PKD1L3Q7Z443 1732 aa20.11■□□□□ 0.81
LETM1-207ENST00000512669 HSP90AB2PQ58FF8 381 aa20.11■□□□□ 0.81
LETM1-207ENST00000512669 YBX3P16989 372 aaKnown RBP eCLIP20.1■□□□□ 0.81
LETM1-207ENST00000512669 C4BP0C0L5 1744 aa20.1■□□□□ 0.81
LETM1-207ENST00000512669 MSL1Q68DK7 614 aa20.09■□□□□ 0.81
LETM1-207ENST00000512669 MPRIPQ6WCQ1 1025 aa20.09■□□□□ 0.81
LETM1-207ENST00000512669 AK7Q96M32 723 aa20.09■□□□□ 0.81
LETM1-207ENST00000512669 POLR3GLQ9BT43 218 aa20.09■□□□□ 0.81
LETM1-207ENST00000512669 ITGB4P16144 1822 aa20.09■□□□□ 0.81
LETM1-207ENST00000512669 NCAPD2Q15021 1401 aa20.08■□□□□ 0.8
LETM1-207ENST00000512669 TOGARAM1Q9Y4F4 1720 aa20.07■□□□□ 0.8
LETM1-207ENST00000512669 CYP27B1O15528 508 aa20.07■□□□□ 0.8
LETM1-207ENST00000512669 ANKRD26Q9UPS8 1709 aa20.06■□□□□ 0.8
LETM1-207ENST00000512669 SPG7Q9UQ90 795 aa20.06■□□□□ 0.8
LETM1-207ENST00000512669 NKX1-1Q15270 411 aaPredicted RBP20.05■□□□□ 0.8
LETM1-207ENST00000512669 UBR3Q6ZT12 1888 aa20.05■□□□□ 0.8
LETM1-207ENST00000512669 ATP10DQ9P241 1426 aa20.04■□□□□ 0.8
LETM1-207ENST00000512669 SSFA2P28290 1259 aa20.04■□□□□ 0.8
LETM1-207ENST00000512669 PANK3Q9H999 370 aa20.04■□□□□ 0.8
LETM1-207ENST00000512669 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.04■□□□□ 0.8
LETM1-207ENST00000512669 EMILIN1Q9Y6C2 1016 aa20.04■□□□□ 0.8
LETM1-207ENST00000512669 PLEKHG2Q9H7P9 1386 aa20.04■□□□□ 0.8
LETM1-207ENST00000512669 PIGBQ92521 554 aa20.02■□□□□ 0.8
LETM1-207ENST00000512669 WASHC2AQ641Q2 1341 aa20.02■□□□□ 0.79
LETM1-207ENST00000512669 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.01■□□□□ 0.79
LETM1-207ENST00000512669 GPBP1L1Q9HC44 474 aaPredicted RBP20.01■□□□□ 0.79
LETM1-207ENST00000512669 MAP2P11137 1827 aaKnown RBP20.01■□□□□ 0.79
LETM1-207ENST00000512669 ADCY9O60503 1353 aa20■□□□□ 0.79
LETM1-207ENST00000512669 LOC102724428A0A0B4J2F2 783 aa20■□□□□ 0.79
LETM1-207ENST00000512669 SIK1P57059 783 aa20■□□□□ 0.79
LETM1-207ENST00000512669 TMOD3Q9NYL9 352 aa20■□□□□ 0.79
LETM1-207ENST00000512669 PPM1GO15355 546 aaPredicted RBP19.99■□□□□ 0.79
LETM1-207ENST00000512669 PHF14O94880 888 aa19.99■□□□□ 0.79
LETM1-207ENST00000512669 POLKQ9UBT6 870 aa19.99■□□□□ 0.79
LETM1-207ENST00000512669 IGSF1Q8N6C5 1336 aa19.98■□□□□ 0.79
LETM1-207ENST00000512669 IFNL2Q8IZJ0 200 aa19.97■□□□□ 0.79
LETM1-207ENST00000512669 KIF7Q2M1P5 1343 aa19.96■□□□□ 0.79
LETM1-207ENST00000512669 LINC00116Q8NCU8 138 aa19.95■□□□□ 0.78
LETM1-207ENST00000512669 EYA1Q99502 592 aa19.95■□□□□ 0.78
LETM1-207ENST00000512669 GNPATO15228 680 aa19.94■□□□□ 0.78
LETM1-207ENST00000512669 PHKG2P15735 406 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms