RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 PLA2G2EQ9NZK7 142 aa10.55□□□□□ -0.72
USP46-208ENST00000512656 IFT172Q9UG01 1749 aa10.55□□□□□ -0.72
USP46-208ENST00000512656 PXDNQ92626 1479 aa10.55□□□□□ -0.72
USP46-208ENST00000512656 RGS12O14924 1447 aa10.54□□□□□ -0.72
USP46-208ENST00000512656 EN1Q05925 392 aaPredicted RBP10.54□□□□□ -0.72
USP46-208ENST00000512656 WNT2BQ93097 391 aa10.54□□□□□ -0.72
USP46-208ENST00000512656 MYOM2P54296 1465 aa10.54□□□□□ -0.72
USP46-208ENST00000512656 RAB3GAP2Q9H2M9 1393 aa10.53□□□□□ -0.72
USP46-208ENST00000512656 PLEKHH1Q9ULM0 1364 aa10.53□□□□□ -0.72
USP46-208ENST00000512656 KNDC1Q76NI1 1749 aa10.53□□□□□ -0.72
USP46-208ENST00000512656 XPCQ01831 940 aaPredicted RBP10.53□□□□□ -0.72
USP46-208ENST00000512656 PSME1Q06323 249 aa10.53□□□□□ -0.72
USP46-208ENST00000512656 NBR1Q14596 966 aa10.53□□□□□ -0.72
USP46-208ENST00000512656 PROX2Q3B8N5 592 aa10.53□□□□□ -0.72
USP46-208ENST00000512656 CFAP70Q5T0N1 1121 aa10.53□□□□□ -0.72
USP46-208ENST00000512656 POGKQ9P215 609 aa10.53□□□□□ -0.72
USP46-208ENST00000512656 COL22A1Q8NFW1 1626 aaPredicted RBP10.53□□□□□ -0.72
USP46-208ENST00000512656 NRXN1Q9ULB1 1477 aa10.53□□□□□ -0.72
USP46-208ENST00000512656 KRT28Q7Z3Y7 464 aa10.52□□□□□ -0.73
USP46-208ENST00000512656 ATAD2Q6PL18 1390 aa10.52□□□□□ -0.73
USP46-208ENST00000512656 ATRNO75882 1429 aa10.51□□□□□ -0.73
USP46-208ENST00000512656 HAP1P54257 671 aaPredicted RBP10.51□□□□□ -0.73
USP46-208ENST00000512656 PRAM1Q96QH2 718 aa10.51□□□□□ -0.73
USP46-208ENST00000512656 SPATA31A3Q5VYP0 1347 aa10.51□□□□□ -0.73
USP46-208ENST00000512656 KIF1AQ12756 1690 aa10.5□□□□□ -0.73
USP46-208ENST00000512656 TRIM6-TRIM34B2RNG4 842 aa10.5□□□□□ -0.73
USP46-208ENST00000512656 HRCP23327 699 aa10.5□□□□□ -0.73
USP46-208ENST00000512656 SAFB2Q14151 953 aaKnown RBP eCLIP10.5□□□□□ -0.73
USP46-208ENST00000512656 FMN2Q9NZ56 1722 aa10.5□□□□□ -0.73
USP46-208ENST00000512656 MAP3K7O43318 606 aa10.49□□□□□ -0.73
USP46-208ENST00000512656 PTPN5P54829 565 aa10.49□□□□□ -0.73
USP46-208ENST00000512656 ANKK1Q8NFD2 765 aa10.49□□□□□ -0.73
USP46-208ENST00000512656 KIAA1468Q9P260 1216 aa10.49□□□□□ -0.73
USP46-208ENST00000512656 EIF3AQ14152 1382 aaKnown RBP10.49□□□□□ -0.73
USP46-208ENST00000512656 DLC1Q96QB1 1528 aa10.48□□□□□ -0.73
USP46-208ENST00000512656 UNC5CLQ8IV45 518 aa10.48□□□□□ -0.73
USP46-208ENST00000512656 GJD4Q96KN9 370 aaPredicted RBP10.48□□□□□ -0.73
USP46-208ENST00000512656 KDM2AQ9Y2K7 1162 aa10.48□□□□□ -0.73
USP46-208ENST00000512656 ARHGEF10O15013 1369 aa10.48□□□□□ -0.73
USP46-208ENST00000512656 TNS3Q68CZ2 1445 aa10.48□□□□□ -0.73
USP46-208ENST00000512656 ANKARQ7Z5J8 1434 aa10.48□□□□□ -0.73
USP46-208ENST00000512656 BCL9LQ86UU0 1499 aa10.48□□□□□ -0.73
USP46-208ENST00000512656 IFFO2Q5TF58 517 aa10.47□□□□□ -0.73
USP46-208ENST00000512656 LMOD2Q6P5Q4 547 aa10.47□□□□□ -0.73
USP46-208ENST00000512656 DCAF11Q8TEB1 546 aa10.47□□□□□ -0.73
USP46-208ENST00000512656 SBNO1A3KN83 1393 aa10.47□□□□□ -0.73
USP46-208ENST00000512656 CCDC125Q86Z20 511 aa10.46□□□□□ -0.73
USP46-208ENST00000512656 TRAK1Q9UPV9 953 aa10.46□□□□□ -0.73
USP46-208ENST00000512656 GPRASP1Q5JY77 1395 aa10.45□□□□□ -0.74
USP46-208ENST00000512656 TSR1Q2NL82 804 aaKnown RBP10.45□□□□□ -0.74
USP46-208ENST00000512656 PACS2Q86VP3 889 aa10.45□□□□□ -0.74
USP46-208ENST00000512656 TSHZ2Q9NRE2 1034 aa10.45□□□□□ -0.74
USP46-208ENST00000512656 EP400Q96L91 3159 aa10.45□□□□□ -0.74
USP46-208ENST00000512656 MARF1Q9Y4F3 1742 aaKnown RBP10.44□□□□□ -0.74
USP46-208ENST00000512656 SLIT2O94813 1529 aa10.44□□□□□ -0.74
USP46-208ENST00000512656 SRCAPQ6ZRS2 3230 aa10.44□□□□□ -0.74
USP46-208ENST00000512656 WASLO00401 505 aaPredicted RBP10.44□□□□□ -0.74
USP46-208ENST00000512656 FAM98CQ17RN3 349 aaKnown RBP10.44□□□□□ -0.74
USP46-208ENST00000512656 NYAP1Q6ZVC0 841 aa10.44□□□□□ -0.74
USP46-208ENST00000512656 PMFBP1Q8TBY8 1022 aa10.44□□□□□ -0.74
USP46-208ENST00000512656 ARHGEF1Q92888 912 aaKnown RBP10.44□□□□□ -0.74
USP46-208ENST00000512656 ZFRQ96KR1 1074 aaKnown RBP10.44□□□□□ -0.74
USP46-208ENST00000512656 HIRIP3Q9BW71 556 aaPredicted RBP10.44□□□□□ -0.74
USP46-208ENST00000512656 ADGRB1O14514 1584 aa10.43□□□□□ -0.74
USP46-208ENST00000512656 MINK1Q8N4C8 1332 aaPredicted RBP10.43□□□□□ -0.74
USP46-208ENST00000512656 SOWAHBA6NEL2 793 aa10.43□□□□□ -0.74
USP46-208ENST00000512656 GRXCR2A6NFK2 248 aa10.43□□□□□ -0.74
USP46-208ENST00000512656 VPS72Q15906 364 aa10.43□□□□□ -0.74
USP46-208ENST00000512656 CABLES1Q8TDN4 633 aa10.43□□□□□ -0.74
USP46-208ENST00000512656 USP32Q8NFA0 1604 aa10.43□□□□□ -0.74
USP46-208ENST00000512656 ADGRB2O60241 1585 aa10.43□□□□□ -0.74
USP46-208ENST00000512656 RALGAPBQ86X10 1494 aa10.42□□□□□ -0.74
USP46-208ENST00000512656 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.42□□□□□ -0.74
USP46-208ENST00000512656 OSBPP22059 807 aa10.42□□□□□ -0.74
USP46-208ENST00000512656 NGDNQ8NEJ9 315 aaKnown RBP10.42□□□□□ -0.74
USP46-208ENST00000512656 CCDC9Q9Y3X0 531 aaKnown RBP10.42□□□□□ -0.74
USP46-208ENST00000512656 PRSS12P56730 875 aa10.41□□□□□ -0.74
USP46-208ENST00000512656 RBM27Q9P2N5 1060 aaKnown RBP10.41□□□□□ -0.74
USP46-208ENST00000512656 TULP4Q9NRJ4 1543 aa10.41□□□□□ -0.74
USP46-208ENST00000512656 RGPD8O14715 1765 aaPredicted RBP10.4□□□□□ -0.74
USP46-208ENST00000512656 SF3B2Q13435 895 aaKnown RBP10.4□□□□□ -0.74
USP46-208ENST00000512656 SEPT12Q8IYM1 358 aa10.4□□□□□ -0.74
USP46-208ENST00000512656 CDCA7LQ96GN5 454 aa10.4□□□□□ -0.74
USP46-208ENST00000512656 TSKSQ9UJT2 592 aa10.4□□□□□ -0.74
USP46-208ENST00000512656 PRR36Q9H6K5 1346 aa10.39□□□□□ -0.75
USP46-208ENST00000512656 FAM83GA6ND36 823 aa10.39□□□□□ -0.75
USP46-208ENST00000512656 PRIM1P49642 420 aaKnown RBP10.39□□□□□ -0.75
USP46-208ENST00000512656 NUDT16Q96DE0 195 aaKnown RBP10.39□□□□□ -0.75
USP46-208ENST00000512656 SEPT9Q9UHD8 586 aaPredicted RBP10.39□□□□□ -0.75
USP46-208ENST00000512656 GLI3P10071 1580 aa10.39□□□□□ -0.75
USP46-208ENST00000512656 A0A0G2JS52 829 aa10.38□□□□□ -0.75
USP46-208ENST00000512656 MYT1Q01538 1121 aa10.38□□□□□ -0.75
USP46-208ENST00000512656 BTG4Q9NY30 223 aa10.38□□□□□ -0.75
USP46-208ENST00000512656 BLMP54132 1417 aaPredicted RBP10.38□□□□□ -0.75
USP46-208ENST00000512656 NWD2Q9ULI1 1742 aa10.38□□□□□ -0.75
USP46-208ENST00000512656 BCAMP50895 628 aa10.37□□□□□ -0.75
USP46-208ENST00000512656 KRT27Q7Z3Y8 459 aa10.37□□□□□ -0.75
USP46-208ENST00000512656 CDK19Q9BWU1 502 aa10.37□□□□□ -0.75
USP46-208ENST00000512656 PRDM11Q9NQV5 511 aa10.37□□□□□ -0.75
USP46-208ENST00000512656 RGS20O76081 388 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms