RNA–Protein interactions for RNA: ENST00000512649.1

SERF1A-207, Transcript of small EDRK-rich factor 1A, humanhuman

TSL 2 BASIC

Gene SERF1A, Length 846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-207ENST00000512649 SRCAPQ6ZRS2 3230 aa22.55■■□□□ 1.2
SERF1A-207ENST00000512649 SYTL4Q96C24 671 aaPredicted RBP22.54■■□□□ 1.2
SERF1A-207ENST00000512649 MEGF6O75095 1541 aa22.53■■□□□ 1.2
SERF1A-207ENST00000512649 TXNRD1Q16881 649 aa22.52■■□□□ 1.2
SERF1A-207ENST00000512649 ANKRD26Q9UPS8 1709 aa22.51■■□□□ 1.19
SERF1A-207ENST00000512649 EYA1Q99502 592 aa22.51■■□□□ 1.19
SERF1A-207ENST00000512649 RREB1Q92766 1687 aa22.5■■□□□ 1.19
SERF1A-207ENST00000512649 PRIM1P49642 420 aaKnown RBP22.5■■□□□ 1.19
SERF1A-207ENST00000512649 EIF4A2Q14240 407 aaKnown RBP22.5■■□□□ 1.19
SERF1A-207ENST00000512649 PROM2Q8N271 834 aa22.5■■□□□ 1.19
SERF1A-207ENST00000512649 AMER1Q5JTC6 1135 aaPredicted RBP22.49■■□□□ 1.19
SERF1A-207ENST00000512649 PCDH11XQ9BZA7 1347 aa22.49■■□□□ 1.19
SERF1A-207ENST00000512649 PCDH11YQ9BZA8 1340 aa22.49■■□□□ 1.19
SERF1A-207ENST00000512649 SPG7Q9UQ90 795 aa22.48■■□□□ 1.19
SERF1A-207ENST00000512649 NHSQ6T4R5 1651 aa22.48■■□□□ 1.19
SERF1A-207ENST00000512649 NUP188Q5SRE5 1749 aa22.48■■□□□ 1.19
SERF1A-207ENST00000512649 STK32BQ9NY57 414 aa22.47■■□□□ 1.19
SERF1A-207ENST00000512649 RGPD3A6NKT7 1758 aaPredicted RBP22.47■■□□□ 1.19
SERF1A-207ENST00000512649 RGPD4Q7Z3J3 1758 aa22.47■■□□□ 1.19
SERF1A-207ENST00000512649 CC2D1BQ5T0F9 858 aaKnown RBP22.46■■□□□ 1.19
SERF1A-207ENST00000512649 PER1O15534 1290 aaPredicted RBP22.45■■□□□ 1.18
SERF1A-207ENST00000512649 CNGB1Q14028 1251 aaPredicted RBP22.45■■□□□ 1.18
SERF1A-207ENST00000512649 ANO8Q9HCE9 1232 aaPredicted RBP22.42■■□□□ 1.18
SERF1A-207ENST00000512649 CYP27B1O15528 508 aa22.41■■□□□ 1.18
SERF1A-207ENST00000512649 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.41■■□□□ 1.18
SERF1A-207ENST00000512649 BTAF1O14981 1849 aa22.41■■□□□ 1.18
SERF1A-207ENST00000512649 SLC15A2Q16348 729 aa22.4■■□□□ 1.18
SERF1A-207ENST00000512649 SLC27A3Q5K4L6 730 aa22.4■■□□□ 1.18
SERF1A-207ENST00000512649 NCAPD2Q15021 1401 aa22.4■■□□□ 1.18
SERF1A-207ENST00000512649 MTHFSP49914 203 aa22.39■■□□□ 1.17
SERF1A-207ENST00000512649 MPRIPQ6WCQ1 1025 aa22.39■■□□□ 1.17
SERF1A-207ENST00000512649 SHANK3Q9BYB0 1731 aa22.39■■□□□ 1.17
SERF1A-207ENST00000512649 IGSF1Q8N6C5 1336 aa22.38■■□□□ 1.17
SERF1A-207ENST00000512649 IFNL2Q8IZJ0 200 aa22.38■■□□□ 1.17
SERF1A-207ENST00000512649 PLEKHO1Q53GL0 409 aaPredicted RBP22.37■■□□□ 1.17
SERF1A-207ENST00000512649 SPON1Q9HCB6 807 aa22.37■■□□□ 1.17
SERF1A-207ENST00000512649 DOT1LQ8TEK3 1739 aa22.37■■□□□ 1.17
SERF1A-207ENST00000512649 NKX1-1Q15270 411 aaPredicted RBP22.36■■□□□ 1.17
SERF1A-207ENST00000512649 LRP5O75197 1615 aa22.35■■□□□ 1.17
SERF1A-207ENST00000512649 IL13P35225 146 aa22.35■■□□□ 1.17
SERF1A-207ENST00000512649 SULT6B1Q6IMI4 303 aa22.35■■□□□ 1.17
SERF1A-207ENST00000512649 LRRC4BQ9NT99 713 aa22.35■■□□□ 1.17
SERF1A-207ENST00000512649 PHKG2P15735 406 aa22.34■■□□□ 1.17
SERF1A-207ENST00000512649 AMOTQ4VCS5 1084 aa22.34■■□□□ 1.17
SERF1A-207ENST00000512649 PPP1R1BQ9UD71 204 aaPredicted RBP22.34■■□□□ 1.17
SERF1A-207ENST00000512649 CCNL1Q9UK58 526 aaPredicted RBP22.34■■□□□ 1.17
SERF1A-207ENST00000512649 NPC1L1Q9UHC9 1359 aa22.34■■□□□ 1.17
SERF1A-207ENST00000512649 HMGB2P26583 209 aaKnown RBP22.32■■□□□ 1.16
SERF1A-207ENST00000512649 KCNQ4P56696 695 aa22.32■■□□□ 1.16
SERF1A-207ENST00000512649 SMARCC1Q92922 1105 aaPredicted RBP22.32■■□□□ 1.16
SERF1A-207ENST00000512649 PKD1L3Q7Z443 1732 aa22.31■■□□□ 1.16
SERF1A-207ENST00000512649 PLEKHG2Q9H7P9 1386 aa22.31■■□□□ 1.16
SERF1A-207ENST00000512649 DIAPH1O60610 1272 aaKnown RBP22.31■■□□□ 1.16
SERF1A-207ENST00000512649 ZBTB7AO95365 584 aa22.31■■□□□ 1.16
SERF1A-207ENST00000512649 HSP90AB1P08238 724 aaKnown RBP22.31■■□□□ 1.16
SERF1A-207ENST00000512649 AEBP1Q8IUX7 1158 aa22.31■■□□□ 1.16
SERF1A-207ENST00000512649 TMOD3Q9NYL9 352 aa22.31■■□□□ 1.16
SERF1A-207ENST00000512649 ZNF530Q6P9A1 599 aaPredicted RBP22.3■■□□□ 1.16
SERF1A-207ENST00000512649 PDGFDQ9GZP0 370 aaPredicted RBP22.3■■□□□ 1.16
SERF1A-207ENST00000512649 TFCP2L1Q9NZI6 479 aa22.3■■□□□ 1.16
SERF1A-207ENST00000512649 ZNF827Q17R98 1081 aa22.29■■□□□ 1.16
SERF1A-207ENST00000512649 C1orf141Q5JVX7 400 aa22.29■■□□□ 1.16
SERF1A-207ENST00000512649 PIGBQ92521 554 aa22.29■■□□□ 1.16
SERF1A-207ENST00000512649 ATF5Q9Y2D1 282 aaPredicted RBP22.29■■□□□ 1.16
SERF1A-207ENST00000512649 AKT1S1Q96B36 256 aa22.27■■□□□ 1.16
SERF1A-207ENST00000512649 PALLDQ8WX93 1383 aa22.26■■□□□ 1.15
SERF1A-207ENST00000512649 HMOX1P09601 288 aa22.26■■□□□ 1.15
SERF1A-207ENST00000512649 DCAF5Q96JK2 942 aa22.26■■□□□ 1.15
SERF1A-207ENST00000512649 CFAP53Q96M91 514 aa22.25■■□□□ 1.15
SERF1A-207ENST00000512649 MTFR1LQ9H019 292 aa22.25■■□□□ 1.15
SERF1A-207ENST00000512649 ERVV-2B6SEH9 535 aa22.24■■□□□ 1.15
SERF1A-207ENST00000512649 U2SURPO15042 1029 aaKnown RBP22.23■■□□□ 1.15
SERF1A-207ENST00000512649 MSH5O43196 834 aa22.23■■□□□ 1.15
SERF1A-207ENST00000512649 CABP4P57796 275 aa22.23■■□□□ 1.15
SERF1A-207ENST00000512649 KDRP35968 1356 aa22.23■■□□□ 1.15
SERF1A-207ENST00000512649 LY75O60449 1722 aa22.23■■□□□ 1.15
SERF1A-207ENST00000512649 PAPPAQ13219 1627 aa22.22■■□□□ 1.15
SERF1A-207ENST00000512649 ITGB4P16144 1822 aa22.22■■□□□ 1.15
SERF1A-207ENST00000512649 TOGARAM1Q9Y4F4 1720 aa22.21■■□□□ 1.15
SERF1A-207ENST00000512649 CASZ1Q86V15 1759 aa22.21■■□□□ 1.15
SERF1A-207ENST00000512649 ASAP1Q9ULH1 1129 aa22.21■■□□□ 1.15
SERF1A-207ENST00000512649 SLC16A10Q8TF71 515 aa22.2■■□□□ 1.14
SERF1A-207ENST00000512649 LOC102724428A0A0B4J2F2 783 aa22.19■■□□□ 1.14
SERF1A-207ENST00000512649 SIK1P57059 783 aa22.19■■□□□ 1.14
SERF1A-207ENST00000512649 AKAP4Q5JQC9 854 aa22.19■■□□□ 1.14
SERF1A-207ENST00000512649 ATG3Q9NT62 314 aa22.19■■□□□ 1.14
SERF1A-207ENST00000512649 PNPLA7Q6ZV29 1317 aa22.18■■□□□ 1.14
SERF1A-207ENST00000512649 AK7Q96M32 723 aa22.18■■□□□ 1.14
SERF1A-207ENST00000512649 NUDCQ9Y266 331 aa22.18■■□□□ 1.14
SERF1A-207ENST00000512649 PPP2R1AP30153 589 aa22.17■■□□□ 1.14
SERF1A-207ENST00000512649 ATP6V1AP38606 617 aa22.17■■□□□ 1.14
SERF1A-207ENST00000512649 PTGER2P43116 358 aa22.17■■□□□ 1.14
SERF1A-207ENST00000512649 DCAF8L1A6NGE4 600 aa22.16■■□□□ 1.14
SERF1A-207ENST00000512649 POLD1P28340 1107 aa22.16■■□□□ 1.14
SERF1A-207ENST00000512649 FLAD1Q8NFF5 587 aa22.16■■□□□ 1.14
SERF1A-207ENST00000512649 RBM42Q9BTD8 480 aaKnown RBP22.16■■□□□ 1.14
SERF1A-207ENST00000512649 NFATC2IPQ8NCF5 419 aa22.15■■□□□ 1.14
SERF1A-207ENST00000512649 MTHFSDQ2M296 383 aaKnown RBP22.14■■□□□ 1.13
SERF1A-207ENST00000512649 COL23A1Q86Y22 540 aaPredicted RBP22.14■■□□□ 1.13
SERF1A-207ENST00000512649 ARXQ96QS3 562 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms