RNA–Protein interactions for RNA: ENST00000512526.1

SGCA-208, Transcript of sarcoglycan alpha, humanhuman

TSL 3

Gene SGCA, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-208ENST00000512526 RGPD2P0DJD1 1756 aa21.16■□□□□ 0.98
SGCA-208ENST00000512526 NUDCQ9Y266 331 aa21.16■□□□□ 0.98
SGCA-208ENST00000512526 BRWD3Q6RI45 1802 aa21.15■□□□□ 0.98
SGCA-208ENST00000512526 BCL9O00512 1426 aa21.15■□□□□ 0.98
SGCA-208ENST00000512526 U2SURPO15042 1029 aaKnown RBP21.15■□□□□ 0.98
SGCA-208ENST00000512526 HMOX1P09601 288 aa21.15■□□□□ 0.98
SGCA-208ENST00000512526 LRRC37A3O60309 1634 aa21.15■□□□□ 0.98
SGCA-208ENST00000512526 PLEKHG2Q9H7P9 1386 aa21.14■□□□□ 0.98
SGCA-208ENST00000512526 SPG7Q9UQ90 795 aa21.14■□□□□ 0.97
SGCA-208ENST00000512526 EP400Q96L91 3159 aa21.13■□□□□ 0.97
SGCA-208ENST00000512526 CYP27B1O15528 508 aa21.13■□□□□ 0.97
SGCA-208ENST00000512526 ANP32CO43423 234 aa21.13■□□□□ 0.97
SGCA-208ENST00000512526 CCDC125Q86Z20 511 aa21.13■□□□□ 0.97
SGCA-208ENST00000512526 RGPD1P0DJD0 1748 aa21.12■□□□□ 0.97
SGCA-208ENST00000512526 AMOTQ4VCS5 1084 aa21.11■□□□□ 0.97
SGCA-208ENST00000512526 PLEKHO1Q53GL0 409 aaPredicted RBP21.11■□□□□ 0.97
SGCA-208ENST00000512526 PCDH11XQ9BZA7 1347 aa21.1■□□□□ 0.97
SGCA-208ENST00000512526 PCDH11YQ9BZA8 1340 aa21.1■□□□□ 0.97
SGCA-208ENST00000512526 TRIM37O94972 964 aa21.1■□□□□ 0.97
SGCA-208ENST00000512526 U2AF1L5P0DN76 240 aaPredicted RBP21.1■□□□□ 0.97
SGCA-208ENST00000512526 U2AF1Q01081 240 aaKnown RBP eCLIP21.1■□□□□ 0.97
SGCA-208ENST00000512526 NKX1-1Q15270 411 aaPredicted RBP21.1■□□□□ 0.97
SGCA-208ENST00000512526 WNK3Q9BYP7 1800 aa21.1■□□□□ 0.97
SGCA-208ENST00000512526 FCHSD2O94868 740 aa21.09■□□□□ 0.97
SGCA-208ENST00000512526 RSPH6AQ9H0K4 717 aa21.09■□□□□ 0.97
SGCA-208ENST00000512526 PHKG2P15735 406 aa21.08■□□□□ 0.97
SGCA-208ENST00000512526 PTF1AQ7RTS3 328 aa21.07■□□□□ 0.96
SGCA-208ENST00000512526 IFNL2Q8IZJ0 200 aa21.07■□□□□ 0.96
SGCA-208ENST00000512526 BCL11BQ9C0K0 894 aaPredicted RBP21.07■□□□□ 0.96
SGCA-208ENST00000512526 KCNQ2O43526 872 aa21.06■□□□□ 0.96
SGCA-208ENST00000512526 PRKAR2BP31323 418 aa21.05■□□□□ 0.96
SGCA-208ENST00000512526 MTHFSDQ2M296 383 aaKnown RBP21.05■□□□□ 0.96
SGCA-208ENST00000512526 CCDC184Q52MB2 194 aa21.05■□□□□ 0.96
SGCA-208ENST00000512526 ACSBG1Q96GR2 724 aa21.05■□□□□ 0.96
SGCA-208ENST00000512526 PHACTR3Q96KR7 559 aa21.05■□□□□ 0.96
SGCA-208ENST00000512526 ZNF530Q6P9A1 599 aaPredicted RBP21.04■□□□□ 0.96
SGCA-208ENST00000512526 PRIM1P49642 420 aaKnown RBP21.03■□□□□ 0.96
SGCA-208ENST00000512526 PLEKHF1Q96S99 279 aa21.03■□□□□ 0.96
SGCA-208ENST00000512526 SF3B2Q13435 895 aaKnown RBP21.02■□□□□ 0.96
SGCA-208ENST00000512526 APBA3O96018 575 aa21.01■□□□□ 0.95
SGCA-208ENST00000512526 HSP90AB1P08238 724 aaKnown RBP21■□□□□ 0.95
SGCA-208ENST00000512526 AKAP4Q5JQC9 854 aa21■□□□□ 0.95
SGCA-208ENST00000512526 DEFB132Q7Z7B7 95 aa21■□□□□ 0.95
SGCA-208ENST00000512526 DCAF5Q96JK2 942 aa21■□□□□ 0.95
SGCA-208ENST00000512526 PKD1L3Q7Z443 1732 aa21■□□□□ 0.95
SGCA-208ENST00000512526 SHANK3Q9BYB0 1731 aa20.99■□□□□ 0.95
SGCA-208ENST00000512526 C1orf141Q5JVX7 400 aa20.99■□□□□ 0.95
SGCA-208ENST00000512526 ADAMTS8Q9UP79 889 aa20.99■□□□□ 0.95
SGCA-208ENST00000512526 SRCAPQ6ZRS2 3230 aa20.99■□□□□ 0.95
SGCA-208ENST00000512526 PLSCR1O15162 318 aa20.98■□□□□ 0.95
SGCA-208ENST00000512526 BAG6P46379 1132 aa20.98■□□□□ 0.95
SGCA-208ENST00000512526 GAS2L2Q8NHY3 880 aa20.98■□□□□ 0.95
SGCA-208ENST00000512526 CAMKK2Q96RR4 588 aa20.98■□□□□ 0.95
SGCA-208ENST00000512526 PNNQ9H307 717 aaKnown RBP20.98■□□□□ 0.95
SGCA-208ENST00000512526 EN1Q05925 392 aaPredicted RBP20.97■□□□□ 0.95
SGCA-208ENST00000512526 ERVV-2B6SEH9 535 aa20.96■□□□□ 0.95
SGCA-208ENST00000512526 WDR43Q15061 677 aaKnown RBP eCLIP20.96■□□□□ 0.95
SGCA-208ENST00000512526 DIEXFQ68CQ4 756 aaKnown RBP20.96■□□□□ 0.95
SGCA-208ENST00000512526 MPRIPQ6WCQ1 1025 aa20.96■□□□□ 0.95
SGCA-208ENST00000512526 PNISRQ8TF01 805 aaKnown RBP20.96■□□□□ 0.95
SGCA-208ENST00000512526 SYTL4Q96C24 671 aaPredicted RBP20.96■□□□□ 0.95
SGCA-208ENST00000512526 LGR6Q9HBX8 967 aa20.95■□□□□ 0.94
SGCA-208ENST00000512526 PIGBQ92521 554 aa20.94■□□□□ 0.94
SGCA-208ENST00000512526 MRS2Q9HD23 443 aa20.94■□□□□ 0.94
SGCA-208ENST00000512526 KDM6AO15550 1401 aaPredicted RBP20.94■□□□□ 0.94
SGCA-208ENST00000512526 RNMTO43148 476 aaKnown RBP20.93■□□□□ 0.94
SGCA-208ENST00000512526 EZH2Q15910 746 aaKnown RBP20.93■□□□□ 0.94
SGCA-208ENST00000512526 PROM2Q8N271 834 aa20.93■□□□□ 0.94
SGCA-208ENST00000512526 IL17REQ8NFR9 667 aa20.93■□□□□ 0.94
SGCA-208ENST00000512526 GNAT3A8MTJ3 354 aa20.92■□□□□ 0.94
SGCA-208ENST00000512526 NEFMP07197 916 aa20.91■□□□□ 0.94
SGCA-208ENST00000512526 MAP3K5Q99683 1374 aa20.9■□□□□ 0.94
SGCA-208ENST00000512526 NFE2L2Q16236 605 aa20.9■□□□□ 0.94
SGCA-208ENST00000512526 RUNDC1Q96C34 613 aa20.9■□□□□ 0.94
SGCA-208ENST00000512526 TMOD3Q9NYL9 352 aa20.9■□□□□ 0.94
SGCA-208ENST00000512526 HTATSF1O43719 755 aaKnown RBP20.89■□□□□ 0.93
SGCA-208ENST00000512526 CABP4P57796 275 aa20.89■□□□□ 0.93
SGCA-208ENST00000512526 CCDC146Q8IYE0 955 aa20.89■□□□□ 0.93
SGCA-208ENST00000512526 NFATC2IPQ8NCF5 419 aa20.89■□□□□ 0.93
SGCA-208ENST00000512526 SBF2Q86WG5 1849 aa20.89■□□□□ 0.93
SGCA-208ENST00000512526 NHSQ6T4R5 1651 aa20.89■□□□□ 0.93
SGCA-208ENST00000512526 MAPK8IP3Q9UPT6 1336 aa20.88■□□□□ 0.93
SGCA-208ENST00000512526 TNS1Q9HBL0 1735 aaKnown RBP20.87■□□□□ 0.93
SGCA-208ENST00000512526 SLC52A2Q9HAB3 445 aa20.87■□□□□ 0.93
SGCA-208ENST00000512526 ASAP1Q9ULH1 1129 aa20.87■□□□□ 0.93
SGCA-208ENST00000512526 TMPOP42166 694 aaKnown RBP20.86■□□□□ 0.93
SGCA-208ENST00000512526 TXNRD1Q16881 649 aa20.86■□□□□ 0.93
SGCA-208ENST00000512526 ATG3Q9NT62 314 aa20.86■□□□□ 0.93
SGCA-208ENST00000512526 CEMIPQ8WUJ3 1361 aa20.85■□□□□ 0.93
SGCA-208ENST00000512526 CCER2I3L3R5 266 aa20.85■□□□□ 0.93
SGCA-208ENST00000512526 SMARCC1Q92922 1105 aaPredicted RBP20.85■□□□□ 0.93
SGCA-208ENST00000512526 MCM10Q7L590 875 aa20.84■□□□□ 0.93
SGCA-208ENST00000512526 MIER1Q8N108 512 aa20.84■□□□□ 0.93
SGCA-208ENST00000512526 RTF1Q92541 710 aaKnown RBP20.84■□□□□ 0.93
SGCA-208ENST00000512526 TOGARAM1Q9Y4F4 1720 aa20.84■□□□□ 0.93
SGCA-208ENST00000512526 RIPK4P57078 832 aa20.83■□□□□ 0.93
SGCA-208ENST00000512526 DCTN1Q14203 1278 aa20.83■□□□□ 0.93
SGCA-208ENST00000512526 LRRC4BQ9NT99 713 aa20.83■□□□□ 0.93
SGCA-208ENST00000512526 DOT1LQ8TEK3 1739 aa20.83■□□□□ 0.92
SGCA-208ENST00000512526 SLC27A3Q5K4L6 730 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms