RNA–Protein interactions for RNA: ENST00000512407.5

LEF1-219, Transcript of lymphoid enhancer binding factor 1, human

TSL 3

Gene LEF1, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LEF1-219	ENST00000512407	USP21	Q9UK80	565 aa		13.69	□□□□□ -0.22
LEF1-219	ENST00000512407	ATRN	O75882	1429 aa		13.68	□□□□□ -0.22
LEF1-219	ENST00000512407	MRPL50	Q8N5N7	158 aa	Known RBP	13.68	□□□□□ -0.22
LEF1-219	ENST00000512407	ORAI2	Q96SN7	254 aa		13.68	□□□□□ -0.22
LEF1-219	ENST00000512407	KIF1B	O60333	1816 aa		13.68	□□□□□ -0.22
LEF1-219	ENST00000512407	FCHSD2	O94868	740 aa		13.67	□□□□□ -0.22
LEF1-219	ENST00000512407	RNF166	Q96A37	237 aa	Predicted RBP	13.67	□□□□□ -0.22
LEF1-219	ENST00000512407	RBM27	Q9P2N5	1060 aa	Known RBP	13.67	□□□□□ -0.22
LEF1-219	ENST00000512407	SOS2	Q07890	1332 aa	Predicted RBP	13.66	□□□□□ -0.22
LEF1-219	ENST00000512407	SENP3-EIF4A1	A0A087X0R7	540 aa		13.66	□□□□□ -0.22
LEF1-219	ENST00000512407	ROBO2	Q9HCK4	1378 aa		13.66	□□□□□ -0.22
LEF1-219	ENST00000512407	PTCH1	Q13635	1447 aa		13.65	□□□□□ -0.22
LEF1-219	ENST00000512407	FAM198A	Q9UFP1	575 aa		13.65	□□□□□ -0.22
LEF1-219	ENST00000512407	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.64	□□□□□ -0.23
LEF1-219	ENST00000512407	PADI6	Q6TGC4	694 aa		13.64	□□□□□ -0.23
LEF1-219	ENST00000512407	GOLGA8CP	A6NN73	597 aa		13.63	□□□□□ -0.23
LEF1-219	ENST00000512407	PPARGC1B	Q86YN6	1023 aa	Known RBP	13.63	□□□□□ -0.23
LEF1-219	ENST00000512407	GPIHBP1	Q8IV16	184 aa		13.63	□□□□□ -0.23
LEF1-219	ENST00000512407	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.63	□□□□□ -0.23
LEF1-219	ENST00000512407	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	13.62	□□□□□ -0.23
LEF1-219	ENST00000512407	TTC13	Q8NBP0	860 aa		13.62	□□□□□ -0.23
LEF1-219	ENST00000512407	SEPT9	Q9UHD8	586 aa	Predicted RBP	13.62	□□□□□ -0.23
LEF1-219	ENST00000512407	PRAG1	Q86YV5	1406 aa		13.62	□□□□□ -0.23
LEF1-219	ENST00000512407	SF3B2	Q13435	895 aa	Known RBP	13.61	□□□□□ -0.23
LEF1-219	ENST00000512407	LAPTM4B	Q86VI4	370 aa		13.61	□□□□□ -0.23
LEF1-219	ENST00000512407	CEP350	Q5VT06	3117 aa		13.61	□□□□□ -0.23
LEF1-219	ENST00000512407	HIC1	Q14526	733 aa		13.6	□□□□□ -0.23
LEF1-219	ENST00000512407	MARF1	Q9Y4F3	1742 aa	Known RBP	13.6	□□□□□ -0.23
LEF1-219	ENST00000512407	PPL	O60437	1756 aa		13.6	□□□□□ -0.23
LEF1-219	ENST00000512407	MYOM2	P54296	1465 aa		13.6	□□□□□ -0.23
LEF1-219	ENST00000512407	NBPF26	B4DH59	902 aa		13.59	□□□□□ -0.23
LEF1-219	ENST00000512407	TATDN2	Q93075	761 aa		13.59	□□□□□ -0.23
LEF1-219	ENST00000512407	KCTD12	Q96CX2	325 aa	Known RBP	13.59	□□□□□ -0.23
LEF1-219	ENST00000512407	PNMA3	Q9UL41	463 aa		13.59	□□□□□ -0.23
LEF1-219	ENST00000512407	PXDN	Q92626	1479 aa		13.59	□□□□□ -0.23
LEF1-219	ENST00000512407	HFM1	A2PYH4	1435 aa		13.58	□□□□□ -0.24
LEF1-219	ENST00000512407	NAIP	Q13075	1403 aa		13.58	□□□□□ -0.24
LEF1-219	ENST00000512407	CDC42BPG	Q6DT37	1551 aa		13.58	□□□□□ -0.24
LEF1-219	ENST00000512407	SMAP	O00193	183 aa		13.57	□□□□□ -0.24
LEF1-219	ENST00000512407	GPR37	O15354	613 aa		13.57	□□□□□ -0.24
LEF1-219	ENST00000512407	FAM98C	Q17RN3	349 aa	Known RBP	13.57	□□□□□ -0.24
LEF1-219	ENST00000512407	LMOD2	Q6P5Q4	547 aa		13.57	□□□□□ -0.24
LEF1-219	ENST00000512407	NUDT18	Q6ZVK8	323 aa		13.57	□□□□□ -0.24
LEF1-219	ENST00000512407	RPGRIP1L	Q68CZ1	1315 aa		13.57	□□□□□ -0.24
LEF1-219	ENST00000512407	C3orf80	F5H4A9	247 aa		13.56	□□□□□ -0.24
LEF1-219	ENST00000512407	GNPAT	O15228	680 aa		13.56	□□□□□ -0.24
LEF1-219	ENST00000512407	XPC	Q01831	940 aa	Predicted RBP	13.56	□□□□□ -0.24
LEF1-219	ENST00000512407	ESCO1	Q5FWF5	840 aa		13.56	□□□□□ -0.24
LEF1-219	ENST00000512407	WNT2B	Q93097	391 aa		13.56	□□□□□ -0.24
LEF1-219	ENST00000512407	GJD4	Q96KN9	370 aa	Predicted RBP	13.55	□□□□□ -0.24
LEF1-219	ENST00000512407	ZFR	Q96KR1	1074 aa	Known RBP	13.55	□□□□□ -0.24
LEF1-219	ENST00000512407	NPHP3	Q7Z494	1330 aa		13.55	□□□□□ -0.24
LEF1-219	ENST00000512407	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	13.54	□□□□□ -0.24
LEF1-219	ENST00000512407	FOXO3	O43524	673 aa		13.54	□□□□□ -0.24
LEF1-219	ENST00000512407	R3HDM1	Q15032	1099 aa	Known RBP	13.54	□□□□□ -0.24
LEF1-219	ENST00000512407	RRBP1	Q9P2E9	1410 aa	Known RBP	13.53	□□□□□ -0.24
LEF1-219	ENST00000512407	WAPL	Q7Z5K2	1190 aa		13.52	□□□□□ -0.25
LEF1-219	ENST00000512407	ANKK1	Q8NFD2	765 aa		13.52	□□□□□ -0.25
LEF1-219	ENST00000512407	GLI3	P10071	1580 aa		13.52	□□□□□ -0.25
LEF1-219	ENST00000512407	BRWD3	Q6RI45	1802 aa		13.52	□□□□□ -0.25
LEF1-219	ENST00000512407	UTRN	P46939	3433 aa		13.52	□□□□□ -0.25
LEF1-219	ENST00000512407	ADGRF5	Q8IZF2	1346 aa		13.51	□□□□□ -0.25
LEF1-219	ENST00000512407	FECH	P22830	423 aa		13.51	□□□□□ -0.25
LEF1-219	ENST00000512407	ZNF784	Q8NCA9	323 aa	Predicted RBP	13.51	□□□□□ -0.25
LEF1-219	ENST00000512407	SLIT2	O94813	1529 aa		13.5	□□□□□ -0.25
LEF1-219	ENST00000512407	RALGAPB	Q86X10	1494 aa		13.5	□□□□□ -0.25
LEF1-219	ENST00000512407	TECPR2	O15040	1411 aa		13.5	□□□□□ -0.25
LEF1-219	ENST00000512407	BAG6	P46379	1132 aa		13.5	□□□□□ -0.25
LEF1-219	ENST00000512407	C1QTNF8	P60827	252 aa		13.5	□□□□□ -0.25
LEF1-219	ENST00000512407	STK26	Q9P289	416 aa		13.5	□□□□□ -0.25
LEF1-219	ENST00000512407	ADGRG1	Q9Y653	693 aa		13.5	□□□□□ -0.25
LEF1-219	ENST00000512407	FMN2	Q9NZ56	1722 aa		13.5	□□□□□ -0.25
LEF1-219	ENST00000512407	PLEKHH1	Q9ULM0	1364 aa		13.49	□□□□□ -0.25
LEF1-219	ENST00000512407	FAM161A	Q3B820	660 aa		13.49	□□□□□ -0.25
LEF1-219	ENST00000512407	THSD4	Q6ZMP0	1018 aa		13.49	□□□□□ -0.25
LEF1-219	ENST00000512407	UNC5CL	Q8IV45	518 aa		13.49	□□□□□ -0.25
LEF1-219	ENST00000512407	EYA1	Q99502	592 aa		13.49	□□□□□ -0.25
LEF1-219	ENST00000512407	IFT172	Q9UG01	1749 aa		13.49	□□□□□ -0.25
LEF1-219	ENST00000512407	LRPPRC	P42704	1394 aa	Known RBP	13.48	□□□□□ -0.25
LEF1-219	ENST00000512407	KNDC1	Q76NI1	1749 aa		13.48	□□□□□ -0.25
LEF1-219	ENST00000512407	SPATA31A3	Q5VYP0	1347 aa		13.48	□□□□□ -0.25
LEF1-219	ENST00000512407	RBM46	Q8TBY0	533 aa	Known RBP	13.48	□□□□□ -0.25
LEF1-219	ENST00000512407	RGPD8	O14715	1765 aa	Predicted RBP	13.48	□□□□□ -0.25
LEF1-219	ENST00000512407	USP32	Q8NFA0	1604 aa		13.47	□□□□□ -0.25
LEF1-219	ENST00000512407	TMEM132E	Q6IEE7	984 aa		13.47	□□□□□ -0.25
LEF1-219	ENST00000512407	HCST	Q9UBK5	93 aa		13.47	□□□□□ -0.25
LEF1-219	ENST00000512407	KIF1A	Q12756	1690 aa		13.47	□□□□□ -0.25
LEF1-219	ENST00000512407	ABCC11	Q96J66	1382 aa		13.46	□□□□□ -0.25
LEF1-219	ENST00000512407	SPATA31E1	Q6ZUB1	1445 aa		13.46	□□□□□ -0.26
LEF1-219	ENST00000512407	SOWAHB	A6NEL2	793 aa		13.45	□□□□□ -0.26
LEF1-219	ENST00000512407	PTPN5	P54829	565 aa		13.45	□□□□□ -0.26
LEF1-219	ENST00000512407	RGL3	Q3MIN7	710 aa		13.45	□□□□□ -0.26
LEF1-219	ENST00000512407	KRT28	Q7Z3Y7	464 aa		13.45	□□□□□ -0.26
LEF1-219	ENST00000512407	SEPT12	Q8IYM1	358 aa		13.45	□□□□□ -0.26
LEF1-219	ENST00000512407	LRCH3	Q96II8	777 aa		13.45	□□□□□ -0.26
LEF1-219	ENST00000512407	PLCH1	Q4KWH8	1693 aa		13.44	□□□□□ -0.26
LEF1-219	ENST00000512407	OAT	P04181	439 aa		13.44	□□□□□ -0.26
LEF1-219	ENST00000512407	BCAM	P50895	628 aa		13.44	□□□□□ -0.26
LEF1-219	ENST00000512407	SAMD7	Q7Z3H4	446 aa		13.44	□□□□□ -0.26
LEF1-219	ENST00000512407	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	13.44	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms