RNA–Protein interactions for RNA: ENST00000512374.1

SLC1A3-211, Transcript of solute carrier family 1 member 3, humanhuman

TSL 1 (best)

Gene SLC1A3, Length 1,096 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3-211ENST00000512374 QRICH2Q9H0J4 1663 aa13.79□□□□□ -0.2
SLC1A3-211ENST00000512374 TOM1L2Q6ZVM7 507 aa13.79□□□□□ -0.2
SLC1A3-211ENST00000512374 L3MBTL2Q969R5 705 aa13.79□□□□□ -0.2
SLC1A3-211ENST00000512374 FAM212AQ96EL1 285 aa13.79□□□□□ -0.2
SLC1A3-211ENST00000512374 TTC21BQ7Z4L5 1316 aa13.79□□□□□ -0.2
SLC1A3-211ENST00000512374 USP31Q70CQ4 1352 aa13.79□□□□□ -0.2
SLC1A3-211ENST00000512374 NUP188Q5SRE5 1749 aa13.78□□□□□ -0.2
SLC1A3-211ENST00000512374 COL18A1P39060 1754 aa13.78□□□□□ -0.2
SLC1A3-211ENST00000512374 TIE1P35590 1138 aa13.78□□□□□ -0.2
SLC1A3-211ENST00000512374 EXOC5O00471 708 aa13.77□□□□□ -0.21
SLC1A3-211ENST00000512374 SBF2Q86WG5 1849 aa13.76□□□□□ -0.21
SLC1A3-211ENST00000512374 ROCK2O75116 1388 aaKnown RBP13.75□□□□□ -0.21
SLC1A3-211ENST00000512374 SGIP1Q9BQI5 828 aa13.75□□□□□ -0.21
SLC1A3-211ENST00000512374 TAOK2Q9UL54 1235 aa13.75□□□□□ -0.21
SLC1A3-211ENST00000512374 PCDHB13Q9Y5F0 798 aa13.75□□□□□ -0.21
SLC1A3-211ENST00000512374 PIK3C2AO00443 1686 aa13.75□□□□□ -0.21
SLC1A3-211ENST00000512374 USP54Q70EL1 1684 aa13.75□□□□□ -0.21
SLC1A3-211ENST00000512374 AKAP12Q02952 1782 aa13.74□□□□□ -0.21
SLC1A3-211ENST00000512374 AXIN2Q9Y2T1 843 aa13.74□□□□□ -0.21
SLC1A3-211ENST00000512374 LRRC37A3O60309 1634 aa13.74□□□□□ -0.21
SLC1A3-211ENST00000512374 MARCH10Q8NA82 808 aaPredicted RBP13.73□□□□□ -0.21
SLC1A3-211ENST00000512374 PPP1R1BQ9UD71 204 aaPredicted RBP13.73□□□□□ -0.21
SLC1A3-211ENST00000512374 KTN1Q86UP2 1357 aaKnown RBP13.72□□□□□ -0.21
SLC1A3-211ENST00000512374 PLCB2Q00722 1185 aa13.72□□□□□ -0.21
SLC1A3-211ENST00000512374 NFAT5O94916 1531 aa13.72□□□□□ -0.21
SLC1A3-211ENST00000512374 WNK3Q9BYP7 1800 aa13.71□□□□□ -0.21
SLC1A3-211ENST00000512374 TTLL13PA6NNM8 815 aa13.71□□□□□ -0.21
SLC1A3-211ENST00000512374 TERF2IPQ9NYB0 399 aa13.71□□□□□ -0.21
SLC1A3-211ENST00000512374 TNS2Q63HR2 1409 aa13.71□□□□□ -0.22
SLC1A3-211ENST00000512374 ERBB3P21860 1342 aa13.7□□□□□ -0.22
SLC1A3-211ENST00000512374 POTEJP0CG39 1038 aa13.7□□□□□ -0.22
SLC1A3-211ENST00000512374 HDGFL2Q7Z4V5 671 aaPredicted RBP13.7□□□□□ -0.22
SLC1A3-211ENST00000512374 SLC16A10Q8TF71 515 aa13.7□□□□□ -0.22
SLC1A3-211ENST00000512374 EDC4Q6P2E9 1401 aaKnown RBP13.7□□□□□ -0.22
SLC1A3-211ENST00000512374 MAP3K5Q99683 1374 aa13.7□□□□□ -0.22
SLC1A3-211ENST00000512374 CSB-PGBD3P0DP91 1061 aa13.69□□□□□ -0.22
SLC1A3-211ENST00000512374 YY1P25490 414 aa13.69□□□□□ -0.22
SLC1A3-211ENST00000512374 SLC15A2Q16348 729 aa13.69□□□□□ -0.22
SLC1A3-211ENST00000512374 TXNRD1Q16881 649 aa13.69□□□□□ -0.22
SLC1A3-211ENST00000512374 MTFR1LQ9H019 292 aa13.69□□□□□ -0.22
SLC1A3-211ENST00000512374 STK32BQ9NY57 414 aa13.69□□□□□ -0.22
SLC1A3-211ENST00000512374 MON2Q7Z3U7 1717 aa13.68□□□□□ -0.22
SLC1A3-211ENST00000512374 IL2RBP14784 551 aa13.68□□□□□ -0.22
SLC1A3-211ENST00000512374 CASZ1Q86V15 1759 aa13.68□□□□□ -0.22
SLC1A3-211ENST00000512374 SLC27A3Q5K4L6 730 aa13.67□□□□□ -0.22
SLC1A3-211ENST00000512374 IFNL1Q8IU54 200 aa13.67□□□□□ -0.22
SLC1A3-211ENST00000512374 ARXQ96QS3 562 aa13.66□□□□□ -0.22
SLC1A3-211ENST00000512374 CGNL1Q0VF96 1302 aa13.65□□□□□ -0.22
SLC1A3-211ENST00000512374 POTEFA5A3E0 1075 aa13.65□□□□□ -0.22
SLC1A3-211ENST00000512374 PTGER2P43116 358 aa13.65□□□□□ -0.22
SLC1A3-211ENST00000512374 VASPP50552 380 aaPredicted RBP13.65□□□□□ -0.22
SLC1A3-211ENST00000512374 MAMSTRQ6ZN01 415 aa13.65□□□□□ -0.22
SLC1A3-211ENST00000512374 NHSQ6T4R5 1651 aa13.64□□□□□ -0.23
SLC1A3-211ENST00000512374 FAM208AQ9UK61 1670 aaKnown RBP13.64□□□□□ -0.23
SLC1A3-211ENST00000512374 IP6K1Q92551 441 aa13.64□□□□□ -0.23
SLC1A3-211ENST00000512374 CARD11Q9BXL7 1154 aa13.64□□□□□ -0.23
SLC1A3-211ENST00000512374 ANO8Q9HCE9 1232 aaPredicted RBP13.64□□□□□ -0.23
SLC1A3-211ENST00000512374 CD163L1Q9NR16 1453 aa13.63□□□□□ -0.23
SLC1A3-211ENST00000512374 DCAF8Q5TAQ9 597 aa13.63□□□□□ -0.23
SLC1A3-211ENST00000512374 TRIM35Q9UPQ4 493 aa13.63□□□□□ -0.23
SLC1A3-211ENST00000512374 KIF24Q5T7B8 1368 aa13.62□□□□□ -0.23
SLC1A3-211ENST00000512374 ZBTB7CA1YPR0 619 aa13.62□□□□□ -0.23
SLC1A3-211ENST00000512374 NLRP2Q9NX02 1062 aa13.62□□□□□ -0.23
SLC1A3-211ENST00000512374 RGPD5Q99666 1765 aa13.61□□□□□ -0.23
SLC1A3-211ENST00000512374 KAT6BQ8WYB5 2073 aa13.61□□□□□ -0.23
SLC1A3-211ENST00000512374 SIN3AQ96ST3 1273 aa13.61□□□□□ -0.23
SLC1A3-211ENST00000512374 SYT17Q9BSW7 474 aa13.61□□□□□ -0.23
SLC1A3-211ENST00000512374 ANKRD24Q8TF21 1146 aa13.6□□□□□ -0.23
SLC1A3-211ENST00000512374 RTL1A6NKG5 1358 aa13.59□□□□□ -0.23
SLC1A3-211ENST00000512374 SEC24BO95487 1268 aa13.59□□□□□ -0.23
SLC1A3-211ENST00000512374 KLHL34Q8N239 644 aa13.59□□□□□ -0.23
SLC1A3-211ENST00000512374 SCUBE2Q9NQ36 999 aa13.59□□□□□ -0.23
SLC1A3-211ENST00000512374 QSER1Q2KHR3 1735 aa13.59□□□□□ -0.23
SLC1A3-211ENST00000512374 PAPPAQ13219 1627 aa13.58□□□□□ -0.24
SLC1A3-211ENST00000512374 PYGBP11216 843 aa13.58□□□□□ -0.24
SLC1A3-211ENST00000512374 CDCA8Q53HL2 280 aa13.58□□□□□ -0.24
SLC1A3-211ENST00000512374 IER5LQ5T953 404 aa13.58□□□□□ -0.24
SLC1A3-211ENST00000512374 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.58□□□□□ -0.24
SLC1A3-211ENST00000512374 TMEM106CQ9BVX2 250 aa13.58□□□□□ -0.24
SLC1A3-211ENST00000512374 SLC12A5Q9H2X9 1139 aa13.58□□□□□ -0.24
SLC1A3-211ENST00000512374 COLQQ9Y215 455 aaPredicted RBP13.58□□□□□ -0.24
SLC1A3-211ENST00000512374 A0A1W2PP64 1363 aa13.58□□□□□ -0.24
SLC1A3-211ENST00000512374 TONSLQ96HA7 1378 aa13.58□□□□□ -0.24
SLC1A3-211ENST00000512374 NEUROD1Q13562 356 aa13.57□□□□□ -0.24
SLC1A3-211ENST00000512374 PTF1AQ7RTS3 328 aa13.57□□□□□ -0.24
SLC1A3-211ENST00000512374 NME9Q86XW9 330 aa13.57□□□□□ -0.24
SLC1A3-211ENST00000512374 TMC1Q8TDI8 760 aa13.57□□□□□ -0.24
SLC1A3-211ENST00000512374 COG3Q96JB2 828 aa13.57□□□□□ -0.24
SLC1A3-211ENST00000512374 LTN1O94822 1766 aa13.57□□□□□ -0.24
SLC1A3-211ENST00000512374 ANKRD36BQ8N2N9 1353 aa13.57□□□□□ -0.24
SLC1A3-211ENST00000512374 PLEKHG2Q9H7P9 1386 aa13.57□□□□□ -0.24
SLC1A3-211ENST00000512374 COL24A1Q17RW2 1714 aa13.56□□□□□ -0.24
SLC1A3-211ENST00000512374 ZBTB7AO95365 584 aa13.56□□□□□ -0.24
SLC1A3-211ENST00000512374 TESK2Q96S53 571 aa13.56□□□□□ -0.24
SLC1A3-211ENST00000512374 NSD2O96028 1365 aa13.56□□□□□ -0.24
SLC1A3-211ENST00000512374 CHD4Q14839 1912 aa13.55□□□□□ -0.24
SLC1A3-211ENST00000512374 FHDC1Q9C0D6 1143 aaPredicted RBP13.55□□□□□ -0.24
SLC1A3-211ENST00000512374 TIMELESSQ9UNS1 1208 aa13.55□□□□□ -0.24
SLC1A3-211ENST00000512374 POLD1P28340 1107 aa13.54□□□□□ -0.24
SLC1A3-211ENST00000512374 FLAD1Q8NFF5 587 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms