RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-231ENST00000512340 EYA1Q99502 592 aa10□□□□□ -0.81
NR1I3-231ENST00000512340 PNNQ9H307 717 aaKnown RBP10□□□□□ -0.81
NR1I3-231ENST00000512340 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10□□□□□ -0.81
NR1I3-231ENST00000512340 PCDH11XQ9BZA7 1347 aa10□□□□□ -0.81
NR1I3-231ENST00000512340 PCDH11YQ9BZA8 1340 aa10□□□□□ -0.81
NR1I3-231ENST00000512340 KAT6BQ8WYB5 2073 aa10□□□□□ -0.81
NR1I3-231ENST00000512340 TNS2Q63HR2 1409 aa9.99□□□□□ -0.81
NR1I3-231ENST00000512340 PARP4Q9UKK3 1724 aaKnown RBP9.99□□□□□ -0.81
NR1I3-231ENST00000512340 PLEKHO1Q53GL0 409 aaPredicted RBP9.99□□□□□ -0.81
NR1I3-231ENST00000512340 U2SURPO15042 1029 aaKnown RBP9.98□□□□□ -0.81
NR1I3-231ENST00000512340 HSP90AB1P08238 724 aaKnown RBP9.98□□□□□ -0.81
NR1I3-231ENST00000512340 C1orf141Q5JVX7 400 aa9.98□□□□□ -0.81
NR1I3-231ENST00000512340 USHBP1Q8N6Y0 703 aa9.98□□□□□ -0.81
NR1I3-231ENST00000512340 DCAF8L1A6NGE4 600 aa9.97□□□□□ -0.81
NR1I3-231ENST00000512340 PPP2R1AP30153 589 aa9.97□□□□□ -0.81
NR1I3-231ENST00000512340 SULT6B1Q6IMI4 303 aa9.97□□□□□ -0.81
NR1I3-231ENST00000512340 BCL11BQ9C0K0 894 aaPredicted RBP9.97□□□□□ -0.81
NR1I3-231ENST00000512340 IGSF1Q8N6C5 1336 aa9.97□□□□□ -0.81
NR1I3-231ENST00000512340 BCL9O00512 1426 aa9.97□□□□□ -0.81
NR1I3-231ENST00000512340 PEAK1Q9H792 1746 aa9.96□□□□□ -0.81
NR1I3-231ENST00000512340 ANP32CO43423 234 aa9.96□□□□□ -0.82
NR1I3-231ENST00000512340 TRIM37O94972 964 aa9.96□□□□□ -0.82
NR1I3-231ENST00000512340 APBA3O96018 575 aa9.96□□□□□ -0.82
NR1I3-231ENST00000512340 IL13P35225 146 aa9.96□□□□□ -0.82
NR1I3-231ENST00000512340 IFNL2Q8IZJ0 200 aa9.96□□□□□ -0.82
NR1I3-231ENST00000512340 MARCH10Q8NA82 808 aaPredicted RBP9.96□□□□□ -0.82
NR1I3-231ENST00000512340 MYBBP1AQ9BQG0 1328 aaKnown RBP9.96□□□□□ -0.82
NR1I3-231ENST00000512340 PSDA5PKW4 1024 aaPredicted RBP9.95□□□□□ -0.82
NR1I3-231ENST00000512340 FAM182BQ5T319 152 aa9.95□□□□□ -0.82
NR1I3-231ENST00000512340 WNK3Q9BYP7 1800 aa9.95□□□□□ -0.82
NR1I3-231ENST00000512340 LRRC37A3O60309 1634 aa9.94□□□□□ -0.82
NR1I3-231ENST00000512340 U2AF1L5P0DN76 240 aaPredicted RBP9.94□□□□□ -0.82
NR1I3-231ENST00000512340 U2AF1Q01081 240 aaKnown RBP eCLIP9.94□□□□□ -0.82
NR1I3-231ENST00000512340 NBPF14Q5TI25 921 aa9.94□□□□□ -0.82
NR1I3-231ENST00000512340 SYTL4Q96C24 671 aaPredicted RBP9.94□□□□□ -0.82
NR1I3-231ENST00000512340 NCAPD2Q15021 1401 aa9.93□□□□□ -0.82
NR1I3-231ENST00000512340 FCHSD2O94868 740 aa9.93□□□□□ -0.82
NR1I3-231ENST00000512340 EN1Q05925 392 aaPredicted RBP9.93□□□□□ -0.82
NR1I3-231ENST00000512340 WDR43Q15061 677 aaKnown RBP eCLIP9.93□□□□□ -0.82
NR1I3-231ENST00000512340 ZNF530Q6P9A1 599 aaPredicted RBP9.93□□□□□ -0.82
NR1I3-231ENST00000512340 POTEDQ86YR6 584 aa9.93□□□□□ -0.82
NR1I3-231ENST00000512340 GAS2L2Q8NHY3 880 aa9.93□□□□□ -0.82
NR1I3-231ENST00000512340 MEGF6O75095 1541 aa9.92□□□□□ -0.82
NR1I3-231ENST00000512340 PLSCR1O15162 318 aa9.92□□□□□ -0.82
NR1I3-231ENST00000512340 HMOX1P09601 288 aa9.92□□□□□ -0.82
NR1I3-231ENST00000512340 R3HDM1Q15032 1099 aaKnown RBP9.92□□□□□ -0.82
NR1I3-231ENST00000512340 SMARCC1Q92922 1105 aaPredicted RBP9.92□□□□□ -0.82
NR1I3-231ENST00000512340 DCAF5Q96JK2 942 aa9.92□□□□□ -0.82
NR1I3-231ENST00000512340 TNS1Q9HBL0 1735 aaKnown RBP9.92□□□□□ -0.82
NR1I3-231ENST00000512340 RGPD2P0DJD1 1756 aa9.91□□□□□ -0.82
NR1I3-231ENST00000512340 KDRP35968 1356 aa9.91□□□□□ -0.82
NR1I3-231ENST00000512340 MAPK8IP3Q9UPT6 1336 aa9.91□□□□□ -0.82
NR1I3-231ENST00000512340 YY1P25490 414 aa9.91□□□□□ -0.82
NR1I3-231ENST00000512340 AKAP4Q5JQC9 854 aa9.91□□□□□ -0.82
NR1I3-231ENST00000512340 ACSBG1Q96GR2 724 aa9.91□□□□□ -0.82
NR1I3-231ENST00000512340 PRKRIP1Q9H875 184 aaPredicted RBP9.91□□□□□ -0.82
NR1I3-231ENST00000512340 ERVV-2B6SEH9 535 aa9.9□□□□□ -0.82
NR1I3-231ENST00000512340 PHKG2P15735 406 aa9.9□□□□□ -0.82
NR1I3-231ENST00000512340 PRIM1P49642 420 aaKnown RBP9.9□□□□□ -0.82
NR1I3-231ENST00000512340 NKX1-1Q15270 411 aaPredicted RBP9.9□□□□□ -0.82
NR1I3-231ENST00000512340 RTF1Q92541 710 aaKnown RBP9.9□□□□□ -0.82
NR1I3-231ENST00000512340 CAMKK2Q96RR4 588 aa9.9□□□□□ -0.82
NR1I3-231ENST00000512340 TMOD3Q9NYL9 352 aa9.9□□□□□ -0.82
NR1I3-231ENST00000512340 CYP27B1O15528 508 aa9.89□□□□□ -0.83
NR1I3-231ENST00000512340 CABP4P57796 275 aa9.89□□□□□ -0.83
NR1I3-231ENST00000512340 SLC27A3Q5K4L6 730 aa9.89□□□□□ -0.83
NR1I3-231ENST00000512340 AEBP1Q8IUX7 1158 aa9.89□□□□□ -0.83
NR1I3-231ENST00000512340 PRKAR2BP31323 418 aa9.88□□□□□ -0.83
NR1I3-231ENST00000512340 MPRIPQ6WCQ1 1025 aa9.88□□□□□ -0.83
NR1I3-231ENST00000512340 SPON1Q9HCB6 807 aa9.88□□□□□ -0.83
NR1I3-231ENST00000512340 GNAT3A8MTJ3 354 aa9.87□□□□□ -0.83
NR1I3-231ENST00000512340 KCNQ2O43526 872 aa9.87□□□□□ -0.83
NR1I3-231ENST00000512340 TEFQ10587 303 aa9.87□□□□□ -0.83
NR1I3-231ENST00000512340 EZH2Q15910 746 aaKnown RBP9.87□□□□□ -0.83
NR1I3-231ENST00000512340 PPP1R1BQ9UD71 204 aaPredicted RBP9.87□□□□□ -0.83
NR1I3-231ENST00000512340 PKD1L3Q7Z443 1732 aa9.87□□□□□ -0.83
NR1I3-231ENST00000512340 RREB1Q92766 1687 aa9.87□□□□□ -0.83
NR1I3-231ENST00000512340 COL3A1P02461 1466 aaPredicted RBP9.86□□□□□ -0.83
NR1I3-231ENST00000512340 HTATSF1O43719 755 aaKnown RBP9.86□□□□□ -0.83
NR1I3-231ENST00000512340 LMOD3Q0VAK6 560 aa9.86□□□□□ -0.83
NR1I3-231ENST00000512340 STK32BQ9NY57 414 aa9.86□□□□□ -0.83
NR1I3-231ENST00000512340 SBF2Q86WG5 1849 aa9.86□□□□□ -0.83
NR1I3-231ENST00000512340 TXNRD1Q16881 649 aa9.85□□□□□ -0.83
NR1I3-231ENST00000512340 MTHFSDQ2M296 383 aaKnown RBP9.85□□□□□ -0.83
NR1I3-231ENST00000512340 RSPH6AQ9H0K4 717 aa9.85□□□□□ -0.83
NR1I3-231ENST00000512340 NHSQ6T4R5 1651 aa9.85□□□□□ -0.83
NR1I3-231ENST00000512340 RGPD3A6NKT7 1758 aaPredicted RBP9.85□□□□□ -0.83
NR1I3-231ENST00000512340 RGPD4Q7Z3J3 1758 aa9.85□□□□□ -0.83
NR1I3-231ENST00000512340 MAP3K5Q99683 1374 aa9.85□□□□□ -0.83
NR1I3-231ENST00000512340 TTC5Q8N0Z6 440 aa9.84□□□□□ -0.83
NR1I3-231ENST00000512340 CCNL1Q9UK58 526 aaPredicted RBP9.84□□□□□ -0.83
NR1I3-231ENST00000512340 NUP188Q5SRE5 1749 aa9.83□□□□□ -0.84
NR1I3-231ENST00000512340 RNMTO43148 476 aaKnown RBP9.83□□□□□ -0.84
NR1I3-231ENST00000512340 PIGBQ92521 554 aa9.83□□□□□ -0.84
NR1I3-231ENST00000512340 SLC52A2Q9HAB3 445 aa9.83□□□□□ -0.84
NR1I3-231ENST00000512340 MRS2Q9HD23 443 aa9.83□□□□□ -0.84
NR1I3-231ENST00000512340 PALLDQ8WX93 1383 aa9.83□□□□□ -0.84
NR1I3-231ENST00000512340 DOT1LQ8TEK3 1739 aa9.82□□□□□ -0.84
NR1I3-231ENST00000512340 NFE2L2Q16236 605 aa9.82□□□□□ -0.84
NR1I3-231ENST00000512340 NFATC2IPQ8NCF5 419 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms