RNA–Protein interactions for RNA: ENST00000512336.5

DDR1-267, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-267ENST00000512336 MSL1Q68DK7 614 aa17.47■□□□□ 0.39
DDR1-267ENST00000512336 COL23A1Q86Y22 540 aaPredicted RBP17.47■□□□□ 0.39
DDR1-267ENST00000512336 LTV1Q96GA3 475 aaPredicted RBP17.47■□□□□ 0.39
DDR1-267ENST00000512336 CCNL1Q9UK58 526 aaPredicted RBP17.47■□□□□ 0.39
DDR1-267ENST00000512336 GPBP1L1Q9HC44 474 aaPredicted RBP17.46■□□□□ 0.39
DDR1-267ENST00000512336 HSPA6P17066 643 aa17.44■□□□□ 0.38
DDR1-267ENST00000512336 TMC1Q8TDI8 760 aa17.44■□□□□ 0.38
DDR1-267ENST00000512336 ZNF526Q8TF50 670 aaPredicted RBP17.44■□□□□ 0.38
DDR1-267ENST00000512336 IP6K1Q92551 441 aa17.44■□□□□ 0.38
DDR1-267ENST00000512336 ADCY9O60503 1353 aa17.43■□□□□ 0.38
DDR1-267ENST00000512336 FAM208AQ9UK61 1670 aaKnown RBP17.43■□□□□ 0.38
DDR1-267ENST00000512336 HDGFL2Q7Z4V5 671 aaPredicted RBP17.43■□□□□ 0.38
DDR1-267ENST00000512336 EDC4Q6P2E9 1401 aaKnown RBP17.43■□□□□ 0.38
DDR1-267ENST00000512336 USP47Q96K76 1375 aa17.41■□□□□ 0.38
DDR1-267ENST00000512336 SLC12A5Q9H2X9 1139 aa17.41■□□□□ 0.38
DDR1-267ENST00000512336 CD2APQ9Y5K6 639 aa17.41■□□□□ 0.38
DDR1-267ENST00000512336 ZCRB1Q8TBF4 217 aaKnown RBP17.4■□□□□ 0.38
DDR1-267ENST00000512336 MEGF6O75095 1541 aa17.4■□□□□ 0.38
DDR1-267ENST00000512336 A0A1W2PP64 1363 aa17.39■□□□□ 0.37
DDR1-267ENST00000512336 SIN3AQ96ST3 1273 aa17.38■□□□□ 0.37
DDR1-267ENST00000512336 HOXC9P31274 260 aa17.37■□□□□ 0.37
DDR1-267ENST00000512336 MAP3K19Q56UN5 1328 aa17.37■□□□□ 0.37
DDR1-267ENST00000512336 C5P01031 1676 aa17.36■□□□□ 0.37
DDR1-267ENST00000512336 TERF2IPQ9NYB0 399 aa17.36■□□□□ 0.37
DDR1-267ENST00000512336 WWC3Q9ULE0 1092 aa17.36■□□□□ 0.37
DDR1-267ENST00000512336 RGPD2P0DJD1 1756 aa17.35■□□□□ 0.37
DDR1-267ENST00000512336 FBLN1P23142 703 aa17.35■□□□□ 0.37
DDR1-267ENST00000512336 AMPHP49418 695 aa17.34■□□□□ 0.37
DDR1-267ENST00000512336 IGSF1Q8N6C5 1336 aa17.34■□□□□ 0.37
DDR1-267ENST00000512336 FLAD1Q8NFF5 587 aa17.34■□□□□ 0.37
DDR1-267ENST00000512336 KIF3CO14782 793 aa17.33■□□□□ 0.36
DDR1-267ENST00000512336 NEUROD1Q13562 356 aa17.33■□□□□ 0.36
DDR1-267ENST00000512336 USHBP1Q8N6Y0 703 aa17.33■□□□□ 0.36
DDR1-267ENST00000512336 PALLDQ8WX93 1383 aa17.32■□□□□ 0.36
DDR1-267ENST00000512336 NBPF6Q5VWK0 638 aa17.32■□□□□ 0.36
DDR1-267ENST00000512336 COG3Q96JB2 828 aa17.32■□□□□ 0.36
DDR1-267ENST00000512336 NBPF4Q96M43 638 aa17.32■□□□□ 0.36
DDR1-267ENST00000512336 AMIGO3Q86WK7 504 aa17.31■□□□□ 0.36
DDR1-267ENST00000512336 CARD11Q9BXL7 1154 aa17.31■□□□□ 0.36
DDR1-267ENST00000512336 SMIM5Q71RC9 77 aa17.3■□□□□ 0.36
DDR1-267ENST00000512336 AK7Q96M32 723 aa17.3■□□□□ 0.36
DDR1-267ENST00000512336 TAF1LQ8IZX4 1826 aa17.3■□□□□ 0.36
DDR1-267ENST00000512336 C4BP0C0L5 1744 aa17.3■□□□□ 0.36
DDR1-267ENST00000512336 CGNL1Q0VF96 1302 aa17.29■□□□□ 0.36
DDR1-267ENST00000512336 RAPGEF4Q8WZA2 1011 aa17.29■□□□□ 0.36
DDR1-267ENST00000512336 TOGARAM1Q9Y4F4 1720 aa17.29■□□□□ 0.36
DDR1-267ENST00000512336 PHF14O94880 888 aa17.28■□□□□ 0.36
DDR1-267ENST00000512336 RRS1Q15050 365 aaKnown RBP17.28■□□□□ 0.36
DDR1-267ENST00000512336 MPRIPQ6WCQ1 1025 aa17.28■□□□□ 0.36
DDR1-267ENST00000512336 RTL1A6NKG5 1358 aa17.28■□□□□ 0.36
DDR1-267ENST00000512336 TATP17735 454 aaPredicted RBP17.27■□□□□ 0.36
DDR1-267ENST00000512336 HMGB2P26583 209 aaKnown RBP17.27■□□□□ 0.36
DDR1-267ENST00000512336 APLP1P51693 650 aa17.27■□□□□ 0.36
DDR1-267ENST00000512336 PCDH11XQ9BZA7 1347 aa17.26■□□□□ 0.35
DDR1-267ENST00000512336 PCDH11YQ9BZA8 1340 aa17.26■□□□□ 0.35
DDR1-267ENST00000512336 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.26■□□□□ 0.35
DDR1-267ENST00000512336 PUS7Q96PZ0 661 aaKnown RBP17.26■□□□□ 0.35
DDR1-267ENST00000512336 CICQ96RK0 1608 aaPredicted RBP17.25■□□□□ 0.35
DDR1-267ENST00000512336 UBR3Q6ZT12 1888 aa17.24■□□□□ 0.35
DDR1-267ENST00000512336 SMG6Q86US8 1419 aaKnown RBP17.24■□□□□ 0.35
DDR1-267ENST00000512336 NSD3Q9BZ95 1437 aa17.24■□□□□ 0.35
DDR1-267ENST00000512336 CYP27B1O15528 508 aa17.24■□□□□ 0.35
DDR1-267ENST00000512336 DNAJC5GQ8N7S2 189 aa17.24■□□□□ 0.35
DDR1-267ENST00000512336 SMARCC1Q92922 1105 aaPredicted RBP17.24■□□□□ 0.35
DDR1-267ENST00000512336 SSFA2P28290 1259 aa17.22■□□□□ 0.35
DDR1-267ENST00000512336 LINC00116Q8NCU8 138 aa17.22■□□□□ 0.35
DDR1-267ENST00000512336 TOMM70O94826 608 aa17.21■□□□□ 0.35
DDR1-267ENST00000512336 PIGBQ92521 554 aa17.21■□□□□ 0.35
DDR1-267ENST00000512336 GGNBP2Q9H3C7 697 aa17.21■□□□□ 0.35
DDR1-267ENST00000512336 PXDNLA1KZ92 1463 aa17.2■□□□□ 0.34
DDR1-267ENST00000512336 ITGB4P16144 1822 aa17.2■□□□□ 0.34
DDR1-267ENST00000512336 HSP90AB2PQ58FF8 381 aa17.2■□□□□ 0.34
DDR1-267ENST00000512336 INSRP06213 1382 aa17.19■□□□□ 0.34
DDR1-267ENST00000512336 LOC102724428A0A0B4J2F2 783 aa17.18■□□□□ 0.34
DDR1-267ENST00000512336 FYB1O15117 783 aa17.18■□□□□ 0.34
DDR1-267ENST00000512336 GNPATO15228 680 aa17.18■□□□□ 0.34
DDR1-267ENST00000512336 MMP10P09238 476 aa17.18■□□□□ 0.34
DDR1-267ENST00000512336 SIK1P57059 783 aa17.18■□□□□ 0.34
DDR1-267ENST00000512336 TESK2Q96S53 571 aa17.18■□□□□ 0.34
DDR1-267ENST00000512336 NMRK2Q9NPI5 230 aa17.18■□□□□ 0.34
DDR1-267ENST00000512336 MAP2P11137 1827 aaKnown RBP17.18■□□□□ 0.34
DDR1-267ENST00000512336 KIAA1551Q9HCM1 1747 aa17.17■□□□□ 0.34
DDR1-267ENST00000512336 BCS1LQ9Y276 419 aa17.17■□□□□ 0.34
DDR1-267ENST00000512336 FLT4P35916 1363 aa17.16■□□□□ 0.34
DDR1-267ENST00000512336 ITPK1Q13572 414 aa17.16■□□□□ 0.34
DDR1-267ENST00000512336 PCNTO95613 3336 aa17.16■□□□□ 0.34
DDR1-267ENST00000512336 PKD1L3Q7Z443 1732 aa17.16■□□□□ 0.34
DDR1-267ENST00000512336 WDR90Q96KV7 1748 aa17.16■□□□□ 0.34
DDR1-267ENST00000512336 ST20-MTHFSA0A0A6YYL1 179 aa17.15■□□□□ 0.34
DDR1-267ENST00000512336 A0A0G2JLW4 131 aa17.15■□□□□ 0.34
DDR1-267ENST00000512336 HTRA3P83110 453 aa17.15■□□□□ 0.34
DDR1-267ENST00000512336 ARHGAP27Q6ZUM4 889 aa17.15■□□□□ 0.34
DDR1-267ENST00000512336 N4BP2Q86UW6 1770 aaPredicted RBP17.15■□□□□ 0.34
DDR1-267ENST00000512336 KIF13BQ9NQT8 1826 aa17.14■□□□□ 0.34
DDR1-267ENST00000512336 TGFB2P61812 414 aa17.14■□□□□ 0.33
DDR1-267ENST00000512336 NKX1-1Q15270 411 aaPredicted RBP17.14■□□□□ 0.33
DDR1-267ENST00000512336 COL13A1Q5TAT6 717 aaPredicted RBP17.14■□□□□ 0.33
DDR1-267ENST00000512336 ASAP1Q9ULH1 1129 aa17.14■□□□□ 0.33
DDR1-267ENST00000512336 C10orf71Q711Q0 1435 aa17.13■□□□□ 0.33
DDR1-267ENST00000512336 ATP6V1AP38606 617 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms