RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 DDX54Q8TDD1 881 aaKnown RBP14.67□□□□□ -0.06
PDLIM5-217ENST00000512274 QRICH2Q9H0J4 1663 aa14.66□□□□□ -0.06
PDLIM5-217ENST00000512274 CD2APQ9Y5K6 639 aa14.66□□□□□ -0.06
PDLIM5-217ENST00000512274 LY75O60449 1722 aa14.65□□□□□ -0.06
PDLIM5-217ENST00000512274 TTC21BQ7Z4L5 1316 aa14.65□□□□□ -0.06
PDLIM5-217ENST00000512274 TOMM70O94826 608 aa14.64□□□□□ -0.07
PDLIM5-217ENST00000512274 PRIM1P49642 420 aaKnown RBP14.64□□□□□ -0.07
PDLIM5-217ENST00000512274 IGSF1Q8N6C5 1336 aa14.64□□□□□ -0.07
PDLIM5-217ENST00000512274 CCNL1Q9UK58 526 aaPredicted RBP14.63□□□□□ -0.07
PDLIM5-217ENST00000512274 NFAT5O94916 1531 aa14.62□□□□□ -0.07
PDLIM5-217ENST00000512274 NBPF1Q3BBV0 1214 aa14.62□□□□□ -0.07
PDLIM5-217ENST00000512274 DOT1LQ8TEK3 1739 aa14.62□□□□□ -0.07
PDLIM5-217ENST00000512274 KLRG1Q96E93 195 aa14.62□□□□□ -0.07
PDLIM5-217ENST00000512274 KIAA1210Q9ULL0 1709 aa14.62□□□□□ -0.07
PDLIM5-217ENST00000512274 ERBB3P21860 1342 aa14.62□□□□□ -0.07
PDLIM5-217ENST00000512274 CENPJQ9HC77 1338 aaPredicted RBP14.61□□□□□ -0.07
PDLIM5-217ENST00000512274 LTN1O94822 1766 aa14.6□□□□□ -0.07
PDLIM5-217ENST00000512274 EIF4G2P78344 907 aaKnown RBP eCLIP14.6□□□□□ -0.07
PDLIM5-217ENST00000512274 ANKRD24Q8TF21 1146 aa14.6□□□□□ -0.07
PDLIM5-217ENST00000512274 NMRK2Q9NPI5 230 aa14.6□□□□□ -0.07
PDLIM5-217ENST00000512274 JMYQ8N9B5 988 aa14.59□□□□□ -0.07
PDLIM5-217ENST00000512274 DIEXFQ68CQ4 756 aaKnown RBP14.58□□□□□ -0.08
PDLIM5-217ENST00000512274 ZNF692Q9BU19 519 aaPredicted RBP14.57□□□□□ -0.08
PDLIM5-217ENST00000512274 NSD2O96028 1365 aa14.57□□□□□ -0.08
PDLIM5-217ENST00000512274 ANKRD36BQ8N2N9 1353 aa14.57□□□□□ -0.08
PDLIM5-217ENST00000512274 C5P01031 1676 aa14.56□□□□□ -0.08
PDLIM5-217ENST00000512274 SMIM5Q71RC9 77 aa14.56□□□□□ -0.08
PDLIM5-217ENST00000512274 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.56□□□□□ -0.08
PDLIM5-217ENST00000512274 LTV1Q96GA3 475 aaPredicted RBP14.56□□□□□ -0.08
PDLIM5-217ENST00000512274 TTC21AQ8NDW8 1320 aa14.56□□□□□ -0.08
PDLIM5-217ENST00000512274 C16orf71Q8IYS4 520 aaPredicted RBP14.55□□□□□ -0.08
PDLIM5-217ENST00000512274 USP47Q96K76 1375 aa14.54□□□□□ -0.08
PDLIM5-217ENST00000512274 TAF1LQ8IZX4 1826 aa14.53□□□□□ -0.08
PDLIM5-217ENST00000512274 KTN1Q86UP2 1357 aaKnown RBP14.53□□□□□ -0.08
PDLIM5-217ENST00000512274 PHF14O94880 888 aa14.53□□□□□ -0.08
PDLIM5-217ENST00000512274 SLC34A2O95436 690 aa14.53□□□□□ -0.08
PDLIM5-217ENST00000512274 HSPA5P11021 654 aaKnown RBP14.53□□□□□ -0.08
PDLIM5-217ENST00000512274 RBM46Q8TBY0 533 aaKnown RBP14.53□□□□□ -0.08
PDLIM5-217ENST00000512274 N4BP2Q86UW6 1770 aaPredicted RBP14.52□□□□□ -0.08
PDLIM5-217ENST00000512274 EVC2Q86UK5 1308 aa14.52□□□□□ -0.08
PDLIM5-217ENST00000512274 FLAD1Q8NFF5 587 aa14.52□□□□□ -0.09
PDLIM5-217ENST00000512274 USP54Q70EL1 1684 aa14.52□□□□□ -0.09
PDLIM5-217ENST00000512274 ROCK2O75116 1388 aaKnown RBP14.51□□□□□ -0.09
PDLIM5-217ENST00000512274 HSPA1AP0DMV8 641 aaKnown RBP14.51□□□□□ -0.09
PDLIM5-217ENST00000512274 HSPA1BP0DMV9 641 aaKnown RBP14.51□□□□□ -0.09
PDLIM5-217ENST00000512274 ARHGAP27Q6ZUM4 889 aa14.51□□□□□ -0.09
PDLIM5-217ENST00000512274 AMIGO3Q86WK7 504 aa14.51□□□□□ -0.09
PDLIM5-217ENST00000512274 NME9Q86XW9 330 aa14.51□□□□□ -0.09
PDLIM5-217ENST00000512274 BCS1LQ9Y276 419 aa14.51□□□□□ -0.09
PDLIM5-217ENST00000512274 CICQ96RK0 1608 aaPredicted RBP14.51□□□□□ -0.09
PDLIM5-217ENST00000512274 RGPD2P0DJD1 1756 aa14.5□□□□□ -0.09
PDLIM5-217ENST00000512274 ZCRB1Q8TBF4 217 aaKnown RBP14.5□□□□□ -0.09
PDLIM5-217ENST00000512274 CARD11Q9BXL7 1154 aa14.49□□□□□ -0.09
PDLIM5-217ENST00000512274 FSTL1Q12841 308 aa14.48□□□□□ -0.09
PDLIM5-217ENST00000512274 AK7Q96M32 723 aa14.48□□□□□ -0.09
PDLIM5-217ENST00000512274 C4BP0C0L5 1744 aa14.47□□□□□ -0.09
PDLIM5-217ENST00000512274 MON2Q7Z3U7 1717 aa14.47□□□□□ -0.09
PDLIM5-217ENST00000512274 TOGARAM1Q9Y4F4 1720 aa14.47□□□□□ -0.09
PDLIM5-217ENST00000512274 UBR3Q6ZT12 1888 aa14.47□□□□□ -0.09
PDLIM5-217ENST00000512274 A0A0G2JLW4 131 aa14.46□□□□□ -0.09
PDLIM5-217ENST00000512274 SLC24A1O60721 1099 aa14.46□□□□□ -0.09
PDLIM5-217ENST00000512274 RRAGCQ9HB90 399 aa14.46□□□□□ -0.09
PDLIM5-217ENST00000512274 USP31Q70CQ4 1352 aa14.46□□□□□ -0.1
PDLIM5-217ENST00000512274 KCPQ6ZWJ8 1503 aa14.46□□□□□ -0.1
PDLIM5-217ENST00000512274 FAM208AQ9UK61 1670 aaKnown RBP14.46□□□□□ -0.1
PDLIM5-217ENST00000512274 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.45□□□□□ -0.1
PDLIM5-217ENST00000512274 C9orf131Q5VYM1 1079 aa14.45□□□□□ -0.1
PDLIM5-217ENST00000512274 KIAA1551Q9HCM1 1747 aa14.45□□□□□ -0.1
PDLIM5-217ENST00000512274 PALLDQ8WX93 1383 aa14.45□□□□□ -0.1
PDLIM5-217ENST00000512274 SBNO2Q9Y2G9 1366 aa14.45□□□□□ -0.1
PDLIM5-217ENST00000512274 PXDNLA1KZ92 1463 aa14.44□□□□□ -0.1
PDLIM5-217ENST00000512274 WASHC2AQ641Q2 1341 aa14.44□□□□□ -0.1
PDLIM5-217ENST00000512274 IP6K1Q92551 441 aa14.44□□□□□ -0.1
PDLIM5-217ENST00000512274 MEGF6O75095 1541 aa14.43□□□□□ -0.1
PDLIM5-217ENST00000512274 FCHSD2O94868 740 aa14.43□□□□□ -0.1
PDLIM5-217ENST00000512274 MPRIPQ6WCQ1 1025 aa14.43□□□□□ -0.1
PDLIM5-217ENST00000512274 PKD1L3Q7Z443 1732 aa14.43□□□□□ -0.1
PDLIM5-217ENST00000512274 KIF13BQ9NQT8 1826 aa14.42□□□□□ -0.1
PDLIM5-217ENST00000512274 MMP10P09238 476 aa14.41□□□□□ -0.1
PDLIM5-217ENST00000512274 USHBP1Q8N6Y0 703 aa14.41□□□□□ -0.1
PDLIM5-217ENST00000512274 SMC1BQ8NDV3 1235 aa14.41□□□□□ -0.1
PDLIM5-217ENST00000512274 KDM2BQ8NHM5 1336 aa14.41□□□□□ -0.1
PDLIM5-217ENST00000512274 DPEP1P16444 411 aa14.4□□□□□ -0.1
PDLIM5-217ENST00000512274 FBLN1P23142 703 aa14.4□□□□□ -0.1
PDLIM5-217ENST00000512274 ITGB4P16144 1822 aa14.4□□□□□ -0.1
PDLIM5-217ENST00000512274 KIF7Q2M1P5 1343 aa14.4□□□□□ -0.1
PDLIM5-217ENST00000512274 HMGB2P26583 209 aaKnown RBP14.39□□□□□ -0.11
PDLIM5-217ENST00000512274 TGFB2P61812 414 aa14.39□□□□□ -0.11
PDLIM5-217ENST00000512274 TMC1Q8TDI8 760 aa14.39□□□□□ -0.11
PDLIM5-217ENST00000512274 TESK2Q96S53 571 aa14.39□□□□□ -0.11
PDLIM5-217ENST00000512274 RNF181Q9P0P0 153 aa14.39□□□□□ -0.11
PDLIM5-217ENST00000512274 BRCA1P38398 1863 aaKnown RBP14.38□□□□□ -0.11
PDLIM5-217ENST00000512274 PLEKHG2Q9H7P9 1386 aa14.38□□□□□ -0.11
PDLIM5-217ENST00000512274 ST20-MTHFSA0A0A6YYL1 179 aa14.38□□□□□ -0.11
PDLIM5-217ENST00000512274 SSFA2P28290 1259 aa14.38□□□□□ -0.11
PDLIM5-217ENST00000512274 AMPHP49418 695 aa14.38□□□□□ -0.11
PDLIM5-217ENST00000512274 LINC00116Q8NCU8 138 aa14.38□□□□□ -0.11
PDLIM5-217ENST00000512274 TNRC6CQ9HCJ0 1690 aaKnown RBP14.38□□□□□ -0.11
PDLIM5-217ENST00000512274 GNPATO15228 680 aa14.37□□□□□ -0.11
PDLIM5-217ENST00000512274 HOXC9P31274 260 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms