RNA–Protein interactions for RNA: ENST00000512069.6

PDE4D-220, Transcript of phosphodiesterase 4D, humanhuman

TSL 2

Gene PDE4D, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-220ENST00000512069 TSGA10IPQ3SY00 556 aa9.59□□□□□ -0.87
PDE4D-220ENST00000512069 CCDC85AQ96PX6 553 aaPredicted RBP9.59□□□□□ -0.87
PDE4D-220ENST00000512069 PTGIRP43119 386 aa9.58□□□□□ -0.88
PDE4D-220ENST00000512069 ERVK-9P63128 1117 aa9.58□□□□□ -0.88
PDE4D-220ENST00000512069 LCE2CQ5TA81 110 aa9.58□□□□□ -0.88
PDE4D-220ENST00000512069 HDGFL1Q5TGJ6 251 aa9.58□□□□□ -0.88
PDE4D-220ENST00000512069 ZMYND15Q9H091 742 aa9.58□□□□□ -0.88
PDE4D-220ENST00000512069 TRAK2O60296 914 aa9.57□□□□□ -0.88
PDE4D-220ENST00000512069 CC2D2BQ6DHV5 1058 aa9.57□□□□□ -0.88
PDE4D-220ENST00000512069 RNF135Q8IUD6 432 aa9.57□□□□□ -0.88
PDE4D-220ENST00000512069 CDCA7Q9BWT1 371 aaPredicted RBP9.57□□□□□ -0.88
PDE4D-220ENST00000512069 MAP7D1Q3KQU3 841 aa9.56□□□□□ -0.88
PDE4D-220ENST00000512069 ADAMTS19Q8TE59 1207 aa9.56□□□□□ -0.88
PDE4D-220ENST00000512069 POLMQ9NP87 494 aaPredicted RBP9.56□□□□□ -0.88
PDE4D-220ENST00000512069 ATP5J2-PTCD1G3V325 749 aa9.55□□□□□ -0.88
PDE4D-220ENST00000512069 NFATC2IPQ8NCF5 419 aa9.55□□□□□ -0.88
PDE4D-220ENST00000512069 USP4Q13107 963 aa9.54□□□□□ -0.88
PDE4D-220ENST00000512069 LZTS3O60299 673 aaPredicted RBP9.53□□□□□ -0.88
PDE4D-220ENST00000512069 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.53□□□□□ -0.88
PDE4D-220ENST00000512069 SLC16A10Q8TF71 515 aa9.53□□□□□ -0.88
PDE4D-220ENST00000512069 OSBPL3Q9H4L5 887 aa9.53□□□□□ -0.88
PDE4D-220ENST00000512069 DOLKQ9UPQ8 538 aa9.53□□□□□ -0.88
PDE4D-220ENST00000512069 H3BM21 787 aa9.52□□□□□ -0.89
PDE4D-220ENST00000512069 MEN1O00255 615 aa9.52□□□□□ -0.89
PDE4D-220ENST00000512069 PLPP7Q8NBV4 271 aa9.52□□□□□ -0.89
PDE4D-220ENST00000512069 RNF217Q8TC41 542 aa9.52□□□□□ -0.89
PDE4D-220ENST00000512069 SIRT1Q96EB6 747 aa9.52□□□□□ -0.89
PDE4D-220ENST00000512069 ESF1Q9H501 851 aaKnown RBP9.52□□□□□ -0.89
PDE4D-220ENST00000512069 A0A1W2PRU2 124 aa9.51□□□□□ -0.89
PDE4D-220ENST00000512069 PIK3CDO00329 1044 aa9.51□□□□□ -0.89
PDE4D-220ENST00000512069 PTSQ03393 145 aa9.51□□□□□ -0.89
PDE4D-220ENST00000512069 FOXD4L5Q5VV16 416 aaPredicted RBP9.51□□□□□ -0.89
PDE4D-220ENST00000512069 PPFIA3O75145 1194 aa9.5□□□□□ -0.89
PDE4D-220ENST00000512069 MYCP01106 439 aaPredicted RBP9.5□□□□□ -0.89
PDE4D-220ENST00000512069 NPAS3Q8IXF0 933 aa9.5□□□□□ -0.89
PDE4D-220ENST00000512069 GLMNQ92990 594 aa9.5□□□□□ -0.89
PDE4D-220ENST00000512069 ERBB4Q15303 1308 aa9.5□□□□□ -0.89
PDE4D-220ENST00000512069 SKIP12755 728 aa9.49□□□□□ -0.89
PDE4D-220ENST00000512069 CYP2U1Q7Z449 544 aa9.49□□□□□ -0.89
PDE4D-220ENST00000512069 CALR3Q96L12 384 aaKnown RBP9.49□□□□□ -0.89
PDE4D-220ENST00000512069 RAB6BQ9NRW1 208 aa9.49□□□□□ -0.89
PDE4D-220ENST00000512069 ZNF777Q9ULD5 760 aaPredicted RBP9.49□□□□□ -0.89
PDE4D-220ENST00000512069 OXLD1Q5BKU9 147 aa9.48□□□□□ -0.89
PDE4D-220ENST00000512069 PRICKLE2Q7Z3G6 844 aa9.48□□□□□ -0.89
PDE4D-220ENST00000512069 UCN2Q96RP3 112 aa9.48□□□□□ -0.89
PDE4D-220ENST00000512069 ARHGEF10LQ9HCE6 1279 aa9.48□□□□□ -0.89
PDE4D-220ENST00000512069 GNRH1P01148 92 aa9.47□□□□□ -0.89
PDE4D-220ENST00000512069 RNF144AP50876 292 aaPredicted RBP9.47□□□□□ -0.89
PDE4D-220ENST00000512069 IRF7Q92985 503 aa9.47□□□□□ -0.89
PDE4D-220ENST00000512069 STAU1O95793 577 aaKnown RBP9.46□□□□□ -0.9
PDE4D-220ENST00000512069 GMPRP36959 345 aa9.46□□□□□ -0.9
PDE4D-220ENST00000512069 TBC1D9Q6ZT07 1266 aa9.46□□□□□ -0.9
PDE4D-220ENST00000512069 ERICH6Q7L0X2 663 aa9.46□□□□□ -0.9
PDE4D-220ENST00000512069 LYSMD3Q7Z3D4 306 aa9.46□□□□□ -0.9
PDE4D-220ENST00000512069 CCDC155Q8N6L0 562 aa9.46□□□□□ -0.9
PDE4D-220ENST00000512069 NLRP3Q96P20 1036 aa9.46□□□□□ -0.9
PDE4D-220ENST00000512069 SLC35F4A4IF30 521 aa9.45□□□□□ -0.9
PDE4D-220ENST00000512069 ATP9BO43861 1147 aa9.45□□□□□ -0.9
PDE4D-220ENST00000512069 RHOQP17081 205 aa9.45□□□□□ -0.9
PDE4D-220ENST00000512069 CLN3Q13286 438 aa9.45□□□□□ -0.9
PDE4D-220ENST00000512069 PLEKHM2Q8IWE5 1019 aa9.45□□□□□ -0.9
PDE4D-220ENST00000512069 SENP3-EIF4A1A0A087X0R7 540 aa9.44□□□□□ -0.9
PDE4D-220ENST00000512069 USP17L5A8MUK1 530 aa9.44□□□□□ -0.9
PDE4D-220ENST00000512069 EML3Q32P44 896 aa9.44□□□□□ -0.9
PDE4D-220ENST00000512069 GPC1P35052 558 aa9.43□□□□□ -0.9
PDE4D-220ENST00000512069 SLC27A3Q5K4L6 730 aa9.43□□□□□ -0.9
PDE4D-220ENST00000512069 C14orf37Q86TY3 774 aa9.43□□□□□ -0.9
PDE4D-220ENST00000512069 XAGE2Q96GT9 111 aa9.43□□□□□ -0.9
PDE4D-220ENST00000512069 TFIP11Q9UBB9 837 aaKnown RBP9.43□□□□□ -0.9
PDE4D-220ENST00000512069 NOD1Q9Y239 953 aa9.43□□□□□ -0.9
PDE4D-220ENST00000512069 WIPF1O43516 503 aa9.42□□□□□ -0.9
PDE4D-220ENST00000512069 IL2RAP01589 272 aa9.42□□□□□ -0.9
PDE4D-220ENST00000512069 POU4F2Q12837 409 aa9.42□□□□□ -0.9
PDE4D-220ENST00000512069 NCOA4Q13772 614 aa9.42□□□□□ -0.9
PDE4D-220ENST00000512069 CNKSR1Q969H4 720 aa9.42□□□□□ -0.9
PDE4D-220ENST00000512069 PPP1R12CQ9BZL4 782 aa9.42□□□□□ -0.9
PDE4D-220ENST00000512069 PCDHGA11Q9Y5H2 935 aa9.42□□□□□ -0.9
PDE4D-220ENST00000512069 PALM3A6NDB9 673 aaPredicted RBP9.41□□□□□ -0.9
PDE4D-220ENST00000512069 ESCO1Q5FWF5 840 aa9.41□□□□□ -0.9
PDE4D-220ENST00000512069 GPR161Q8N6U8 529 aaKnown RBP9.41□□□□□ -0.9
PDE4D-220ENST00000512069 ESYT1Q9BSJ8 1104 aa9.41□□□□□ -0.9
PDE4D-220ENST00000512069 GRIP2Q9C0E4 1043 aa9.41□□□□□ -0.9
PDE4D-220ENST00000512069 USP17L3A6NCW0 530 aa9.4□□□□□ -0.9
PDE4D-220ENST00000512069 USP17L4A6NCW7 530 aa9.4□□□□□ -0.9
PDE4D-220ENST00000512069 CENPCQ03188 943 aa9.4□□□□□ -0.9
PDE4D-220ENST00000512069 USP17L2Q6R6M4 530 aa9.4□□□□□ -0.9
PDE4D-220ENST00000512069 USP17L1Q7RTZ2 530 aa9.4□□□□□ -0.9
PDE4D-220ENST00000512069 DEPDC4Q8N2C3 294 aa9.4□□□□□ -0.9
PDE4D-220ENST00000512069 HRH3Q9Y5N1 445 aa9.4□□□□□ -0.9
PDE4D-220ENST00000512069 VSIG8P0DPA2 414 aa9.39□□□□□ -0.91
PDE4D-220ENST00000512069 ITGA6P23229 1130 aa9.39□□□□□ -0.91
PDE4D-220ENST00000512069 ETNK1Q9HBU6 452 aa9.39□□□□□ -0.91
PDE4D-220ENST00000512069 MAFBQ9Y5Q3 323 aaPredicted RBP9.39□□□□□ -0.91
PDE4D-220ENST00000512069 WASLO00401 505 aaPredicted RBP9.38□□□□□ -0.91
PDE4D-220ENST00000512069 TRIM50Q86XT4 487 aa9.38□□□□□ -0.91
PDE4D-220ENST00000512069 VWA5B2Q8N398 1253 aa9.38□□□□□ -0.91
PDE4D-220ENST00000512069 CDC14CA4D256 554 aa9.37□□□□□ -0.91
PDE4D-220ENST00000512069 ZBTB7BO15156 539 aaPredicted RBP9.37□□□□□ -0.91
PDE4D-220ENST00000512069 INHAP05111 366 aa9.37□□□□□ -0.91
PDE4D-220ENST00000512069 SCNN1DP51172 638 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms