RNA–Protein interactions for RNA: ENST00000511977.1

LETM1-205, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 2

Gene LETM1, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-205ENST00000511977 PAPPAQ13219 1627 aa24.62■■□□□ 1.53
LETM1-205ENST00000511977 RGPD2P0DJD1 1756 aa24.62■■□□□ 1.53
LETM1-205ENST00000511977 TNNT2P45379 298 aaPredicted RBP24.6■■□□□ 1.53
LETM1-205ENST00000511977 NSD2O96028 1365 aa24.59■■□□□ 1.53
LETM1-205ENST00000511977 NBPF6Q5VWK0 638 aa24.59■■□□□ 1.53
LETM1-205ENST00000511977 NBPF4Q96M43 638 aa24.59■■□□□ 1.53
LETM1-205ENST00000511977 KNSTRNQ9Y448 316 aa24.59■■□□□ 1.53
LETM1-205ENST00000511977 ANKRD26Q9UPS8 1709 aa24.58■■□□□ 1.53
LETM1-205ENST00000511977 USHBP1Q8N6Y0 703 aa24.58■■□□□ 1.53
LETM1-205ENST00000511977 STK32BQ9NY57 414 aa24.58■■□□□ 1.53
LETM1-205ENST00000511977 ATF5Q9Y2D1 282 aaPredicted RBP24.58■■□□□ 1.53
LETM1-205ENST00000511977 PTGER2P43116 358 aa24.57■■□□□ 1.52
LETM1-205ENST00000511977 SLC15A2Q16348 729 aa24.57■■□□□ 1.52
LETM1-205ENST00000511977 SHANK3Q9BYB0 1731 aa24.57■■□□□ 1.52
LETM1-205ENST00000511977 DDX54Q8TDD1 881 aaKnown RBP24.56■■□□□ 1.52
LETM1-205ENST00000511977 RAPGEF4Q8WZA2 1011 aa24.56■■□□□ 1.52
LETM1-205ENST00000511977 POLKQ9UBT6 870 aa24.55■■□□□ 1.52
LETM1-205ENST00000511977 MEGF6O75095 1541 aa24.55■■□□□ 1.52
LETM1-205ENST00000511977 ZNF827Q17R98 1081 aa24.54■■□□□ 1.52
LETM1-205ENST00000511977 MORC1Q86VD1 984 aa24.54■■□□□ 1.52
LETM1-205ENST00000511977 DOT1LQ8TEK3 1739 aa24.54■■□□□ 1.52
LETM1-205ENST00000511977 WASHC2AQ641Q2 1341 aa24.54■■□□□ 1.52
LETM1-205ENST00000511977 ZCRB1Q8TBF4 217 aaKnown RBP24.53■■□□□ 1.52
LETM1-205ENST00000511977 LRRC4BQ9NT99 713 aa24.53■■□□□ 1.52
LETM1-205ENST00000511977 KAT6BQ8WYB5 2073 aa24.52■■□□□ 1.52
LETM1-205ENST00000511977 TATP17735 454 aaPredicted RBP24.52■■□□□ 1.52
LETM1-205ENST00000511977 YY1P25490 414 aa24.5■■□□□ 1.51
LETM1-205ENST00000511977 MAP2P11137 1827 aaKnown RBP24.48■■□□□ 1.51
LETM1-205ENST00000511977 KCNQ4P56696 695 aa24.48■■□□□ 1.51
LETM1-205ENST00000511977 SGIP1Q9BQI5 828 aa24.47■■□□□ 1.51
LETM1-205ENST00000511977 TUBGCP6Q96RT7 1819 aa24.47■■□□□ 1.51
LETM1-205ENST00000511977 AMER1Q5JTC6 1135 aaPredicted RBP24.45■■□□□ 1.5
LETM1-205ENST00000511977 FHDC1Q9C0D6 1143 aaPredicted RBP24.45■■□□□ 1.5
LETM1-205ENST00000511977 MTFR1LQ9H019 292 aa24.45■■□□□ 1.5
LETM1-205ENST00000511977 EIF4A2Q14240 407 aaKnown RBP24.44■■□□□ 1.5
LETM1-205ENST00000511977 SYTL4Q96C24 671 aaPredicted RBP24.44■■□□□ 1.5
LETM1-205ENST00000511977 EYA1Q99502 592 aa24.44■■□□□ 1.5
LETM1-205ENST00000511977 PCDH11XQ9BZA7 1347 aa24.43■■□□□ 1.5
LETM1-205ENST00000511977 PCDH11YQ9BZA8 1340 aa24.43■■□□□ 1.5
LETM1-205ENST00000511977 PRIM1P49642 420 aaKnown RBP24.43■■□□□ 1.5
LETM1-205ENST00000511977 LY75O60449 1722 aa24.42■■□□□ 1.5
LETM1-205ENST00000511977 AKT1S1Q96B36 256 aa24.42■■□□□ 1.5
LETM1-205ENST00000511977 NCAPD2Q15021 1401 aa24.42■■□□□ 1.5
LETM1-205ENST00000511977 PER1O15534 1290 aaPredicted RBP24.4■■□□□ 1.5
LETM1-205ENST00000511977 CC2D1BQ5T0F9 858 aaKnown RBP24.4■■□□□ 1.5
LETM1-205ENST00000511977 QSER1Q2KHR3 1735 aa24.39■■□□□ 1.5
LETM1-205ENST00000511977 SYT17Q9BSW7 474 aa24.39■■□□□ 1.49
LETM1-205ENST00000511977 SPG7Q9UQ90 795 aa24.39■■□□□ 1.49
LETM1-205ENST00000511977 PNPLA7Q6ZV29 1317 aa24.37■■□□□ 1.49
LETM1-205ENST00000511977 CNGB1Q14028 1251 aaPredicted RBP24.36■■□□□ 1.49
LETM1-205ENST00000511977 IGSF1Q8N6C5 1336 aa24.35■■□□□ 1.49
LETM1-205ENST00000511977 DCAF8L1A6NGE4 600 aa24.35■■□□□ 1.49
LETM1-205ENST00000511977 CYP27B1O15528 508 aa24.35■■□□□ 1.49
LETM1-205ENST00000511977 ARXQ96QS3 562 aa24.35■■□□□ 1.49
LETM1-205ENST00000511977 PKD1L3Q7Z443 1732 aa24.35■■□□□ 1.49
LETM1-205ENST00000511977 SLC27A3Q5K4L6 730 aa24.34■■□□□ 1.49
LETM1-205ENST00000511977 TOGARAM1Q9Y4F4 1720 aa24.34■■□□□ 1.49
LETM1-205ENST00000511977 COL24A1Q17RW2 1714 aa24.33■■□□□ 1.49
LETM1-205ENST00000511977 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.33■■□□□ 1.49
LETM1-205ENST00000511977 NPC1L1Q9UHC9 1359 aa24.32■■□□□ 1.48
LETM1-205ENST00000511977 MTHFSP49914 203 aa24.31■■□□□ 1.48
LETM1-205ENST00000511977 TFCP2L1Q9NZI6 479 aa24.3■■□□□ 1.48
LETM1-205ENST00000511977 CCNL1Q9UK58 526 aaPredicted RBP24.3■■□□□ 1.48
LETM1-205ENST00000511977 PLEKHG2Q9H7P9 1386 aa24.29■■□□□ 1.48
LETM1-205ENST00000511977 KLHL34Q8N239 644 aa24.29■■□□□ 1.48
LETM1-205ENST00000511977 MPRIPQ6WCQ1 1025 aa24.28■■□□□ 1.48
LETM1-205ENST00000511977 IFNL2Q8IZJ0 200 aa24.28■■□□□ 1.48
LETM1-205ENST00000511977 MAP3K5Q99683 1374 aa24.28■■□□□ 1.48
LETM1-205ENST00000511977 C5P01031 1676 aa24.27■■□□□ 1.48
LETM1-205ENST00000511977 IL13P35225 146 aa24.27■■□□□ 1.48
LETM1-205ENST00000511977 UTRNP46939 3433 aa24.26■■□□□ 1.47
LETM1-205ENST00000511977 PHKG2P15735 406 aa24.26■■□□□ 1.47
LETM1-205ENST00000511977 NKX1-1Q15270 411 aaPredicted RBP24.26■■□□□ 1.47
LETM1-205ENST00000511977 PLEKHO1Q53GL0 409 aaPredicted RBP24.25■■□□□ 1.47
LETM1-205ENST00000511977 SULT6B1Q6IMI4 303 aa24.25■■□□□ 1.47
LETM1-205ENST00000511977 AEBP1Q8IUX7 1158 aa24.25■■□□□ 1.47
LETM1-205ENST00000511977 ITGB4P16144 1822 aa24.24■■□□□ 1.47
LETM1-205ENST00000511977 AMOTQ4VCS5 1084 aa24.23■■□□□ 1.47
LETM1-205ENST00000511977 COL23A1Q86Y22 540 aaPredicted RBP24.23■■□□□ 1.47
LETM1-205ENST00000511977 NLGN2Q8NFZ4 835 aa24.23■■□□□ 1.47
LETM1-205ENST00000511977 SLC16A10Q8TF71 515 aa24.23■■□□□ 1.47
LETM1-205ENST00000511977 TAF1LQ8IZX4 1826 aa24.23■■□□□ 1.47
LETM1-205ENST00000511977 PALLDQ8WX93 1383 aa24.22■■□□□ 1.47
LETM1-205ENST00000511977 DIAPH1O60610 1272 aaKnown RBP24.22■■□□□ 1.47
LETM1-205ENST00000511977 MSL1Q68DK7 614 aa24.22■■□□□ 1.47
LETM1-205ENST00000511977 ZNF784Q8NCA9 323 aaPredicted RBP24.22■■□□□ 1.47
LETM1-205ENST00000511977 KDRP35968 1356 aa24.21■■□□□ 1.47
LETM1-205ENST00000511977 ZNF530Q6P9A1 599 aaPredicted RBP24.21■■□□□ 1.47
LETM1-205ENST00000511977 TMOD3Q9NYL9 352 aa24.21■■□□□ 1.47
LETM1-205ENST00000511977 MSH5O43196 834 aa24.2■■□□□ 1.46
LETM1-205ENST00000511977 POLD1P28340 1107 aa24.2■■□□□ 1.46
LETM1-205ENST00000511977 CHD4Q14839 1912 aa24.2■■□□□ 1.46
LETM1-205ENST00000511977 HSP90AB1P08238 724 aaKnown RBP24.19■■□□□ 1.46
LETM1-205ENST00000511977 AMIGO3Q86WK7 504 aa24.19■■□□□ 1.46
LETM1-205ENST00000511977 PIGBQ92521 554 aa24.19■■□□□ 1.46
LETM1-205ENST00000511977 SMARCC1Q92922 1105 aaPredicted RBP24.19■■□□□ 1.46
LETM1-205ENST00000511977 C1orf141Q5JVX7 400 aa24.18■■□□□ 1.46
LETM1-205ENST00000511977 SMIM5Q71RC9 77 aa24.18■■□□□ 1.46
LETM1-205ENST00000511977 HMOX1P09601 288 aa24.17■■□□□ 1.46
LETM1-205ENST00000511977 PELP1Q8IZL8 1130 aaKnown RBP24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms