RNA–Protein interactions for RNA: ENST00000511873.6

SMN2-211, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 431 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-211ENST00000511873 RNF144AP50876 292 aaPredicted RBP11.85□□□□□ -0.51
SMN2-211ENST00000511873 NANOS1Q8WY41 292 aaKnown RBP11.85□□□□□ -0.51
SMN2-211ENST00000511873 CEP126Q9P2H0 1117 aa11.85□□□□□ -0.51
SMN2-211ENST00000511873 A0A1W2PRU2 124 aa11.84□□□□□ -0.51
SMN2-211ENST00000511873 MEN1O00255 615 aa11.84□□□□□ -0.51
SMN2-211ENST00000511873 ITGA6P23229 1130 aa11.84□□□□□ -0.51
SMN2-211ENST00000511873 PRICKLE2Q7Z3G6 844 aa11.84□□□□□ -0.51
SMN2-211ENST00000511873 GPR161Q8N6U8 529 aaKnown RBP11.84□□□□□ -0.51
SMN2-211ENST00000511873 SCTRP47872 440 aa11.83□□□□□ -0.52
SMN2-211ENST00000511873 SENP3-EIF4A1A0A087X0R7 540 aa11.82□□□□□ -0.52
SMN2-211ENST00000511873 EIF4G2P78344 907 aaKnown RBP eCLIP11.82□□□□□ -0.52
SMN2-211ENST00000511873 CYP2U1Q7Z449 544 aa11.82□□□□□ -0.52
SMN2-211ENST00000511873 CDC14CA4D256 554 aa11.81□□□□□ -0.52
SMN2-211ENST00000511873 VWA5B2Q8N398 1253 aa11.81□□□□□ -0.52
SMN2-211ENST00000511873 NLRP3Q96P20 1036 aa11.81□□□□□ -0.52
SMN2-211ENST00000511873 GPC1P35052 558 aa11.8□□□□□ -0.52
SMN2-211ENST00000511873 IRF5Q13568 498 aa11.8□□□□□ -0.52
SMN2-211ENST00000511873 SV2AQ7L0J3 742 aa11.8□□□□□ -0.52
SMN2-211ENST00000511873 CNTNAP3BQ96NU0 1288 aa11.79□□□□□ -0.52
SMN2-211ENST00000511873 CNTNAP3Q9BZ76 1288 aa11.79□□□□□ -0.52
SMN2-211ENST00000511873 OSBPL3Q9H4L5 887 aa11.79□□□□□ -0.52
SMN2-211ENST00000511873 GDPD2Q9HCC8 539 aa11.79□□□□□ -0.52
SMN2-211ENST00000511873 TRAK2O60296 914 aa11.78□□□□□ -0.52
SMN2-211ENST00000511873 RHOQP17081 205 aa11.78□□□□□ -0.52
SMN2-211ENST00000511873 CLN3Q13286 438 aa11.78□□□□□ -0.52
SMN2-211ENST00000511873 SLC27A3Q5K4L6 730 aa11.78□□□□□ -0.52
SMN2-211ENST00000511873 COL25A1Q9BXS0 654 aaPredicted RBP11.78□□□□□ -0.52
SMN2-211ENST00000511873 KRT76Q01546 638 aa11.77□□□□□ -0.53
SMN2-211ENST00000511873 CCDC85AQ96PX6 553 aaPredicted RBP11.77□□□□□ -0.53
SMN2-211ENST00000511873 MYCP01106 439 aaPredicted RBP11.76□□□□□ -0.53
SMN2-211ENST00000511873 ABL2P42684 1182 aa11.76□□□□□ -0.53
SMN2-211ENST00000511873 VAC14Q08AM6 782 aa11.76□□□□□ -0.53
SMN2-211ENST00000511873 CDCA7Q9BWT1 371 aaPredicted RBP11.76□□□□□ -0.53
SMN2-211ENST00000511873 ARHGEF10LQ9HCE6 1279 aa11.76□□□□□ -0.53
SMN2-211ENST00000511873 GNRH1P01148 92 aa11.75□□□□□ -0.53
SMN2-211ENST00000511873 POU4F2Q12837 409 aa11.74□□□□□ -0.53
SMN2-211ENST00000511873 SLFNL1Q499Z3 407 aa11.74□□□□□ -0.53
SMN2-211ENST00000511873 GRIP2Q9C0E4 1043 aa11.74□□□□□ -0.53
SMN2-211ENST00000511873 WASHC4Q2M389 1173 aa11.73□□□□□ -0.53
SMN2-211ENST00000511873 PHTF2Q8N3S3 785 aa11.73□□□□□ -0.53
SMN2-211ENST00000511873 MCM6Q14566 821 aa11.72□□□□□ -0.53
SMN2-211ENST00000511873 TSGA10IPQ3SY00 556 aa11.72□□□□□ -0.53
SMN2-211ENST00000511873 RNFT1Q5M7Z0 435 aa11.72□□□□□ -0.53
SMN2-211ENST00000511873 RNF135Q8IUD6 432 aa11.72□□□□□ -0.53
SMN2-211ENST00000511873 RAB6BQ9NRW1 208 aa11.72□□□□□ -0.53
SMN2-211ENST00000511873 USP4Q13107 963 aa11.71□□□□□ -0.53
SMN2-211ENST00000511873 CNKSR1Q969H4 720 aa11.71□□□□□ -0.53
SMN2-211ENST00000511873 ESYT1Q9BSJ8 1104 aa11.71□□□□□ -0.53
SMN2-211ENST00000511873 CUEDC1Q9NWM3 386 aaPredicted RBP11.71□□□□□ -0.53
SMN2-211ENST00000511873 DOLKQ9UPQ8 538 aa11.71□□□□□ -0.53
SMN2-211ENST00000511873 DYRK1BQ9Y463 629 aa11.7□□□□□ -0.54
SMN2-211ENST00000511873 NBPF10Q6P3W6 841 aaKnown RBP11.69□□□□□ -0.54
SMN2-211ENST00000511873 RIPOR1Q6ZS17 1223 aa11.69□□□□□ -0.54
SMN2-211ENST00000511873 NBPF15Q8N660 670 aa11.69□□□□□ -0.54
SMN2-211ENST00000511873 SPATA31C2B4DYI2 1134 aa11.68□□□□□ -0.54
SMN2-211ENST00000511873 CENPCQ03188 943 aa11.68□□□□□ -0.54
SMN2-211ENST00000511873 SEMA3FQ13275 785 aa11.68□□□□□ -0.54
SMN2-211ENST00000511873 WDR44Q5JSH3 913 aa11.68□□□□□ -0.54
SMN2-211ENST00000511873 GMCL1Q96IK5 515 aa11.68□□□□□ -0.54
SMN2-211ENST00000511873 GAS2L1Q99501 681 aaPredicted RBP11.68□□□□□ -0.54
SMN2-211ENST00000511873 IL2RAP01589 272 aa11.67□□□□□ -0.54
SMN2-211ENST00000511873 TAS1R3Q7RTX0 852 aa11.67□□□□□ -0.54
SMN2-211ENST00000511873 TRIM22Q8IYM9 498 aa11.67□□□□□ -0.54
SMN2-211ENST00000511873 SIRT1Q96EB6 747 aa11.67□□□□□ -0.54
SMN2-211ENST00000511873 OXLD1Q5BKU9 147 aa11.66□□□□□ -0.54
SMN2-211ENST00000511873 ESCO1Q5FWF5 840 aa11.66□□□□□ -0.54
SMN2-211ENST00000511873 TIMMDC1Q9NPL8 285 aa11.66□□□□□ -0.54
SMN2-211ENST00000511873 H7C1W4 665 aa11.65□□□□□ -0.54
SMN2-211ENST00000511873 WASLO00401 505 aaPredicted RBP11.65□□□□□ -0.54
SMN2-211ENST00000511873 SOX11P35716 441 aa11.65□□□□□ -0.54
SMN2-211ENST00000511873 DBN1Q16643 649 aa11.65□□□□□ -0.54
SMN2-211ENST00000511873 FOXR1Q6PIV2 292 aa11.65□□□□□ -0.54
SMN2-211ENST00000511873 ZNF837Q96EG3 531 aaPredicted RBP11.65□□□□□ -0.54
SMN2-211ENST00000511873 XAGE2Q96GT9 111 aa11.65□□□□□ -0.54
SMN2-211ENST00000511873 CHIC2Q9UKJ5 165 aa11.65□□□□□ -0.54
SMN2-211ENST00000511873 COG6Q9Y2V7 657 aa11.65□□□□□ -0.54
SMN2-211ENST00000511873 SLURP2P0DP57 97 aa11.64□□□□□ -0.55
SMN2-211ENST00000511873 ZSCAN10Q96SZ4 725 aaPredicted RBP11.64□□□□□ -0.55
SMN2-211ENST00000511873 GTF2E1P29083 439 aaPredicted RBP11.63□□□□□ -0.55
SMN2-211ENST00000511873 MAP7D1Q3KQU3 841 aa11.63□□□□□ -0.55
SMN2-211ENST00000511873 HRH3Q9Y5N1 445 aa11.63□□□□□ -0.55
SMN2-211ENST00000511873 ZNF385CQ66K41 422 aaPredicted RBP11.62□□□□□ -0.55
SMN2-211ENST00000511873 SVOPQ8N4V2 548 aa11.62□□□□□ -0.55
SMN2-211ENST00000511873 F11P03951 625 aa11.61□□□□□ -0.55
SMN2-211ENST00000511873 SRSF11Q05519 484 aaKnown RBP11.61□□□□□ -0.55
SMN2-211ENST00000511873 TMEM214Q6NUQ4 689 aaKnown RBP11.61□□□□□ -0.55
SMN2-211ENST00000511873 GPR25O00155 361 aa11.6□□□□□ -0.55
SMN2-211ENST00000511873 ADAMTS2O95450 1211 aa11.6□□□□□ -0.55
SMN2-211ENST00000511873 PHKA2P46019 1235 aa11.6□□□□□ -0.55
SMN2-211ENST00000511873 GAS6Q14393 721 aa11.6□□□□□ -0.55
SMN2-211ENST00000511873 WWC1Q8IX03 1113 aa11.6□□□□□ -0.55
SMN2-211ENST00000511873 PLPP7Q8NBV4 271 aa11.6□□□□□ -0.55
SMN2-211ENST00000511873 ADAMTS8Q9UP79 889 aa11.6□□□□□ -0.55
SMN2-211ENST00000511873 STAU1O95793 577 aaKnown RBP11.59□□□□□ -0.55
SMN2-211ENST00000511873 GNASQ5JWF2 1037 aa11.59□□□□□ -0.55
SMN2-211ENST00000511873 WHAMMQ8TF30 809 aa11.59□□□□□ -0.55
SMN2-211ENST00000511873 GTPBP3Q969Y2 492 aaKnown RBP11.59□□□□□ -0.55
SMN2-211ENST00000511873 FHDC1Q9C0D6 1143 aaPredicted RBP11.59□□□□□ -0.55
SMN2-211ENST00000511873 ETNK1Q9HBU6 452 aa11.59□□□□□ -0.55
SMN2-211ENST00000511873 TRERF1Q96PN7 1200 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms