RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 NHSQ6T4R5 1651 aa17.29■□□□□ 0.36
COL6A6-203ENST00000511332 KDRP35968 1356 aa17.28■□□□□ 0.36
COL6A6-203ENST00000511332 PRKRIP1Q9H875 184 aaPredicted RBP17.28■□□□□ 0.36
COL6A6-203ENST00000511332 VIRMAQ69YN4 1812 aaKnown RBP17.27■□□□□ 0.36
COL6A6-203ENST00000511332 SOCS7O14512 581 aa17.26■□□□□ 0.35
COL6A6-203ENST00000511332 BCL9O00512 1426 aa17.26■□□□□ 0.35
COL6A6-203ENST00000511332 PCDH11XQ9BZA7 1347 aa17.25■□□□□ 0.35
COL6A6-203ENST00000511332 PCDH11YQ9BZA8 1340 aa17.25■□□□□ 0.35
COL6A6-203ENST00000511332 FAM196AQ6ZSG2 479 aa17.25■□□□□ 0.35
COL6A6-203ENST00000511332 NUDCQ9Y266 331 aa17.25■□□□□ 0.35
COL6A6-203ENST00000511332 SULT6B1Q6IMI4 303 aa17.24■□□□□ 0.35
COL6A6-203ENST00000511332 ZCRB1Q8TBF4 217 aaKnown RBP17.24■□□□□ 0.35
COL6A6-203ENST00000511332 RGPD3A6NKT7 1758 aaPredicted RBP17.24■□□□□ 0.35
COL6A6-203ENST00000511332 RGPD4Q7Z3J3 1758 aa17.24■□□□□ 0.35
COL6A6-203ENST00000511332 U2SURPO15042 1029 aaKnown RBP17.23■□□□□ 0.35
COL6A6-203ENST00000511332 ANP32CO43423 234 aa17.23■□□□□ 0.35
COL6A6-203ENST00000511332 MARCH10Q8NA82 808 aaPredicted RBP17.23■□□□□ 0.35
COL6A6-203ENST00000511332 KAT6BQ8WYB5 2073 aa17.23■□□□□ 0.35
COL6A6-203ENST00000511332 TOGARAM1Q9Y4F4 1720 aa17.22■□□□□ 0.35
COL6A6-203ENST00000511332 FAM182BQ5T319 152 aa17.22■□□□□ 0.35
COL6A6-203ENST00000511332 AEBP1Q8IUX7 1158 aa17.22■□□□□ 0.35
COL6A6-203ENST00000511332 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.22■□□□□ 0.35
COL6A6-203ENST00000511332 SPG7Q9UQ90 795 aa17.22■□□□□ 0.35
COL6A6-203ENST00000511332 BTAF1O14981 1849 aa17.21■□□□□ 0.35
COL6A6-203ENST00000511332 ITGB4P16144 1822 aa17.21■□□□□ 0.35
COL6A6-203ENST00000511332 CCDC125Q86Z20 511 aa17.2■□□□□ 0.34
COL6A6-203ENST00000511332 SCN11AQ9UI33 1791 aa17.2■□□□□ 0.34
COL6A6-203ENST00000511332 HMOX1P09601 288 aa17.19■□□□□ 0.34
COL6A6-203ENST00000511332 AMOTQ4VCS5 1084 aa17.19■□□□□ 0.34
COL6A6-203ENST00000511332 DDX54Q8TDD1 881 aaKnown RBP17.19■□□□□ 0.34
COL6A6-203ENST00000511332 UPF1Q92900 1129 aaKnown RBP eCLIP17.19■□□□□ 0.34
COL6A6-203ENST00000511332 SF3B2Q13435 895 aaKnown RBP17.18■□□□□ 0.34
COL6A6-203ENST00000511332 PLEKHO1Q53GL0 409 aaPredicted RBP17.18■□□□□ 0.34
COL6A6-203ENST00000511332 U2AF1L5P0DN76 240 aaPredicted RBP17.17■□□□□ 0.34
COL6A6-203ENST00000511332 U2AF1Q01081 240 aaKnown RBP eCLIP17.17■□□□□ 0.34
COL6A6-203ENST00000511332 DLG5Q8TDM6 1919 aa17.16■□□□□ 0.34
COL6A6-203ENST00000511332 RREB1Q92766 1687 aa17.16■□□□□ 0.34
COL6A6-203ENST00000511332 ADAMTS7Q9UKP4 1686 aa17.16■□□□□ 0.34
COL6A6-203ENST00000511332 TRIM37O94972 964 aa17.15■□□□□ 0.34
COL6A6-203ENST00000511332 IFNL2Q8IZJ0 200 aa17.15■□□□□ 0.34
COL6A6-203ENST00000511332 CYP27B1O15528 508 aa17.14■□□□□ 0.33
COL6A6-203ENST00000511332 FCHSD2O94868 740 aa17.14■□□□□ 0.33
COL6A6-203ENST00000511332 ZNF530Q6P9A1 599 aaPredicted RBP17.14■□□□□ 0.33
COL6A6-203ENST00000511332 RSPH6AQ9H0K4 717 aa17.14■□□□□ 0.33
COL6A6-203ENST00000511332 HSP90AB1P08238 724 aaKnown RBP17.13■□□□□ 0.33
COL6A6-203ENST00000511332 PHKG2P15735 406 aa17.13■□□□□ 0.33
COL6A6-203ENST00000511332 PRKAR2BP31323 418 aa17.13■□□□□ 0.33
COL6A6-203ENST00000511332 C1orf141Q5JVX7 400 aa17.13■□□□□ 0.33
COL6A6-203ENST00000511332 NEFMP07197 916 aa17.12■□□□□ 0.33
COL6A6-203ENST00000511332 BAG6P46379 1132 aa17.12■□□□□ 0.33
COL6A6-203ENST00000511332 WDR43Q15061 677 aaKnown RBP eCLIP17.12■□□□□ 0.33
COL6A6-203ENST00000511332 BCL11BQ9C0K0 894 aaPredicted RBP17.12■□□□□ 0.33
COL6A6-203ENST00000511332 PNNQ9H307 717 aaKnown RBP17.12■□□□□ 0.33
COL6A6-203ENST00000511332 LY75O60449 1722 aa17.12■□□□□ 0.33
COL6A6-203ENST00000511332 NUP188Q5SRE5 1749 aa17.11■□□□□ 0.33
COL6A6-203ENST00000511332 NKX1-1Q15270 411 aaPredicted RBP17.11■□□□□ 0.33
COL6A6-203ENST00000511332 GAS2L2Q8NHY3 880 aa17.1■□□□□ 0.33
COL6A6-203ENST00000511332 ACSBG1Q96GR2 724 aa17.1■□□□□ 0.33
COL6A6-203ENST00000511332 KDM6AO15550 1401 aaPredicted RBP17.1■□□□□ 0.33
COL6A6-203ENST00000511332 SIPA1L3O60292 1781 aaPredicted RBP17.1■□□□□ 0.33
COL6A6-203ENST00000511332 AKAP4Q5JQC9 854 aa17.09■□□□□ 0.33
COL6A6-203ENST00000511332 DCAF5Q96JK2 942 aa17.09■□□□□ 0.33
COL6A6-203ENST00000511332 MAP3K5Q99683 1374 aa17.09■□□□□ 0.33
COL6A6-203ENST00000511332 MRC1P22897 1456 aa17.09■□□□□ 0.33
COL6A6-203ENST00000511332 PAPPAQ13219 1627 aa17.08■□□□□ 0.32
COL6A6-203ENST00000511332 MAPK8IP3Q9UPT6 1336 aa17.08■□□□□ 0.32
COL6A6-203ENST00000511332 APBA3O96018 575 aa17.08■□□□□ 0.32
COL6A6-203ENST00000511332 MTHFSDQ2M296 383 aaKnown RBP17.08■□□□□ 0.32
COL6A6-203ENST00000511332 SYTL4Q96C24 671 aaPredicted RBP17.08■□□□□ 0.32
COL6A6-203ENST00000511332 MRS2Q9HD23 443 aa17.07■□□□□ 0.32
COL6A6-203ENST00000511332 KCNQ2O43526 872 aa17.06■□□□□ 0.32
COL6A6-203ENST00000511332 PRIM1P49642 420 aaKnown RBP17.06■□□□□ 0.32
COL6A6-203ENST00000511332 DIEXFQ68CQ4 756 aaKnown RBP17.05■□□□□ 0.32
COL6A6-203ENST00000511332 PHACTR3Q96KR7 559 aa17.05■□□□□ 0.32
COL6A6-203ENST00000511332 ERVV-2B6SEH9 535 aa17.04■□□□□ 0.32
COL6A6-203ENST00000511332 PLSCR1O15162 318 aa17.04■□□□□ 0.32
COL6A6-203ENST00000511332 DEFB132Q7Z7B7 95 aa17.04■□□□□ 0.32
COL6A6-203ENST00000511332 PLEKHF1Q96S99 279 aa17.04■□□□□ 0.32
COL6A6-203ENST00000511332 TMOD3Q9NYL9 352 aa17.04■□□□□ 0.32
COL6A6-203ENST00000511332 TAF1LQ8IZX4 1826 aa17.04■□□□□ 0.32
COL6A6-203ENST00000511332 C5P01031 1676 aa17.04■□□□□ 0.32
COL6A6-203ENST00000511332 ZNF831Q5JPB2 1677 aa17.04■□□□□ 0.32
COL6A6-203ENST00000511332 GNAT3A8MTJ3 354 aa17.03■□□□□ 0.32
COL6A6-203ENST00000511332 MPRIPQ6WCQ1 1025 aa17.03■□□□□ 0.32
COL6A6-203ENST00000511332 PTF1AQ7RTS3 328 aa17.03■□□□□ 0.32
COL6A6-203ENST00000511332 UBR2Q8IWV8 1755 aa17.02■□□□□ 0.32
COL6A6-203ENST00000511332 EN1Q05925 392 aaPredicted RBP17.02■□□□□ 0.32
COL6A6-203ENST00000511332 CCDC184Q52MB2 194 aa17.02■□□□□ 0.32
COL6A6-203ENST00000511332 CICQ96RK0 1608 aaPredicted RBP17.02■□□□□ 0.31
COL6A6-203ENST00000511332 CABP4P57796 275 aa17.01■□□□□ 0.31
COL6A6-203ENST00000511332 RUNDC1Q96C34 613 aa17.01■□□□□ 0.31
COL6A6-203ENST00000511332 CAMKK2Q96RR4 588 aa17.01■□□□□ 0.31
COL6A6-203ENST00000511332 ADAMTS8Q9UP79 889 aa17.01■□□□□ 0.31
COL6A6-203ENST00000511332 RNMTO43148 476 aaKnown RBP17■□□□□ 0.31
COL6A6-203ENST00000511332 NFE2L2Q16236 605 aa17■□□□□ 0.31
COL6A6-203ENST00000511332 RTF1Q92541 710 aaKnown RBP17■□□□□ 0.31
COL6A6-203ENST00000511332 CEMIPQ8WUJ3 1361 aa17■□□□□ 0.31
COL6A6-203ENST00000511332 PALLDQ8WX93 1383 aa17■□□□□ 0.31
COL6A6-203ENST00000511332 HTATSF1O43719 755 aaKnown RBP16.99■□□□□ 0.31
COL6A6-203ENST00000511332 EZH2Q15910 746 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms