RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 PEAK1Q9H792 1746 aa16.62■□□□□ 0.25
HMGB2-205ENST00000511316 KNSTRNQ9Y448 316 aa16.61■□□□□ 0.25
HMGB2-205ENST00000511316 DISP2A7MBM2 1401 aa16.61■□□□□ 0.25
HMGB2-205ENST00000511316 FAM182BQ5T319 152 aa16.61■□□□□ 0.25
HMGB2-205ENST00000511316 AMPHP49418 695 aa16.6■□□□□ 0.25
HMGB2-205ENST00000511316 CNGB1Q14028 1251 aaPredicted RBP16.6■□□□□ 0.25
HMGB2-205ENST00000511316 WDR43Q15061 677 aaKnown RBP eCLIP16.59■□□□□ 0.251e-11■■■□□ 16.2
HMGB2-205ENST00000511316 NSD2O96028 1365 aa16.59■□□□□ 0.25
HMGB2-205ENST00000511316 KIF24Q5T7B8 1368 aa16.59■□□□□ 0.25
HMGB2-205ENST00000511316 TNNT2P45379 298 aaPredicted RBP16.59■□□□□ 0.25
HMGB2-205ENST00000511316 NBPF6Q5VWK0 638 aa16.59■□□□□ 0.25
HMGB2-205ENST00000511316 NBPF4Q96M43 638 aa16.59■□□□□ 0.25
HMGB2-205ENST00000511316 RTL1A6NKG5 1358 aa16.58■□□□□ 0.25
HMGB2-205ENST00000511316 CSB-PGBD3P0DP91 1061 aa16.58■□□□□ 0.24
HMGB2-205ENST00000511316 DAXXQ9UER7 740 aaPredicted RBP16.58■□□□□ 0.24
HMGB2-205ENST00000511316 LTV1Q96GA3 475 aaPredicted RBP16.57■□□□□ 0.24
HMGB2-205ENST00000511316 NLRP2Q9NX02 1062 aa16.57■□□□□ 0.24
HMGB2-205ENST00000511316 FLT4P35916 1363 aa16.57■□□□□ 0.24
HMGB2-205ENST00000511316 MAP2P11137 1827 aaKnown RBP16.57■□□□□ 0.24
HMGB2-205ENST00000511316 ANKRD26Q9UPS8 1709 aa16.56■□□□□ 0.24
HMGB2-205ENST00000511316 AAMPQ13685 434 aa16.55■□□□□ 0.24
HMGB2-205ENST00000511316 MORC1Q86VD1 984 aa16.55■□□□□ 0.24
HMGB2-205ENST00000511316 KDM2BQ8NHM5 1336 aa16.54■□□□□ 0.24
HMGB2-205ENST00000511316 A0A0G2JS52 829 aa16.54■□□□□ 0.24
HMGB2-205ENST00000511316 NEFMP07197 916 aa16.54■□□□□ 0.24
HMGB2-205ENST00000511316 GOLGA2Q08379 1002 aa16.54■□□□□ 0.24
HMGB2-205ENST00000511316 MARCH10Q8NA82 808 aaPredicted RBP16.54■□□□□ 0.24
HMGB2-205ENST00000511316 PARP4Q9UKK3 1724 aaKnown RBP16.54■□□□□ 0.24
HMGB2-205ENST00000511316 SRCAPQ6ZRS2 3230 aa16.54■□□□□ 0.24
HMGB2-205ENST00000511316 CC2D1BQ5T0F9 858 aaKnown RBP16.54■□□□□ 0.24
HMGB2-205ENST00000511316 CRBNQ96SW2 442 aa16.53■□□□□ 0.24
HMGB2-205ENST00000511316 CDCA7Q9BWT1 371 aaPredicted RBP16.53■□□□□ 0.24
HMGB2-205ENST00000511316 RGPD2P0DJD1 1756 aa16.53■□□□□ 0.24
HMGB2-205ENST00000511316 ZNF521Q96K83 1311 aa16.52■□□□□ 0.24
HMGB2-205ENST00000511316 FAM208AQ9UK61 1670 aaKnown RBP16.52■□□□□ 0.24
HMGB2-205ENST00000511316 DDB1Q16531 1140 aa16.52■□□□□ 0.24
HMGB2-205ENST00000511316 FAM161AQ3B820 660 aa16.52■□□□□ 0.24
HMGB2-205ENST00000511316 NPM2Q86SE8 214 aaKnown RBP16.52■□□□□ 0.24
HMGB2-205ENST00000511316 NCAPD2Q15021 1401 aa16.51■□□□□ 0.23
HMGB2-205ENST00000511316 IL2RBP14784 551 aa16.51■□□□□ 0.23
HMGB2-205ENST00000511316 EIF4A2Q14240 407 aaKnown RBP16.51■□□□□ 0.23
HMGB2-205ENST00000511316 CCDC125Q86Z20 511 aa16.51■□□□□ 0.23
HMGB2-205ENST00000511316 USHBP1Q8N6Y0 703 aa16.51■□□□□ 0.23
HMGB2-205ENST00000511316 CDCA7LQ96GN5 454 aa16.51■□□□□ 0.23
HMGB2-205ENST00000511316 EYA1Q99502 592 aa16.51■□□□□ 0.23
HMGB2-205ENST00000511316 LRRC37A3O60309 1634 aa16.51■□□□□ 0.23
HMGB2-205ENST00000511316 EXOC5O00471 708 aa16.49■□□□□ 0.23
HMGB2-205ENST00000511316 PPP2R1AP30153 589 aa16.49■□□□□ 0.23
HMGB2-205ENST00000511316 FAM196AQ6ZSG2 479 aa16.49■□□□□ 0.23
HMGB2-205ENST00000511316 WNK3Q9BYP7 1800 aa16.49■□□□□ 0.23
HMGB2-205ENST00000511316 DUSP27Q5VZP5 1158 aa16.49■□□□□ 0.23
HMGB2-205ENST00000511316 PTF1AQ7RTS3 328 aa16.49■□□□□ 0.23
HMGB2-205ENST00000511316 BCL9O00512 1426 aa16.48■□□□□ 0.23
HMGB2-205ENST00000511316 MTHFSP49914 203 aa16.48■□□□□ 0.23
HMGB2-205ENST00000511316 MEGF6O75095 1541 aa16.48■□□□□ 0.23
HMGB2-205ENST00000511316 ADAMTS8Q9UP79 889 aa16.47■□□□□ 0.23
HMGB2-205ENST00000511316 E9PSI1 815 aa16.47■□□□□ 0.23
HMGB2-205ENST00000511316 DEFB132Q7Z7B7 95 aa16.47■□□□□ 0.23
HMGB2-205ENST00000511316 SALL2Q9Y467 1007 aaPredicted RBP16.47■□□□□ 0.23
HMGB2-205ENST00000511316 TRIM37O94972 964 aa16.46■□□□□ 0.23
HMGB2-205ENST00000511316 IL13P35225 146 aa16.46■□□□□ 0.23
HMGB2-205ENST00000511316 TRMT2AQ8IZ69 625 aaKnown RBP16.46■□□□□ 0.23
HMGB2-205ENST00000511316 TNS2Q63HR2 1409 aa16.46■□□□□ 0.23
HMGB2-205ENST00000511316 SLFN5Q08AF3 891 aa16.45■□□□□ 0.22
HMGB2-205ENST00000511316 IGSF1Q8N6C5 1336 aa16.44■□□□□ 0.22
HMGB2-205ENST00000511316 MAPK8IP3Q9UPT6 1336 aa16.44■□□□□ 0.22
HMGB2-205ENST00000511316 OVOS2A0A0G2JMS6 1433 aa16.44■□□□□ 0.22
HMGB2-205ENST00000511316 NCBP3Q53F19 620 aaKnown RBP16.44■□□□□ 0.22
HMGB2-205ENST00000511316 PDE3AQ14432 1141 aa16.43■□□□□ 0.22
HMGB2-205ENST00000511316 KCNQ2O43526 872 aa16.42■□□□□ 0.22
HMGB2-205ENST00000511316 GSE1Q14687 1217 aa16.42■□□□□ 0.22
HMGB2-205ENST00000511316 ZCRB1Q8TBF4 217 aaKnown RBP16.42■□□□□ 0.22
HMGB2-205ENST00000511316 CYP27B1O15528 508 aa16.41■□□□□ 0.22
HMGB2-205ENST00000511316 PLIN1O60240 522 aa16.41■□□□□ 0.22
HMGB2-205ENST00000511316 CAMKK2Q96RR4 588 aa16.41■□□□□ 0.22
HMGB2-205ENST00000511316 SHANK3Q9BYB0 1731 aa16.41■□□□□ 0.22
HMGB2-205ENST00000511316 VIRMAQ69YN4 1812 aaKnown RBP16.4■□□□□ 0.22
HMGB2-205ENST00000511316 SBF2Q86WG5 1849 aa16.4■□□□□ 0.22
HMGB2-205ENST00000511316 AEBP1Q8IUX7 1158 aa16.4■□□□□ 0.22
HMGB2-205ENST00000511316 DDX54Q8TDD1 881 aaKnown RBP16.4■□□□□ 0.22
HMGB2-205ENST00000511316 LAS1LQ9Y4W2 734 aaKnown RBP16.4■□□□□ 0.22
HMGB2-205ENST00000511316 EN1Q05925 392 aaPredicted RBP16.4■□□□□ 0.22
HMGB2-205ENST00000511316 COL3A1P02461 1466 aaPredicted RBP16.4■□□□□ 0.22
HMGB2-205ENST00000511316 KDRP35968 1356 aa16.39■□□□□ 0.21
HMGB2-205ENST00000511316 RAPGEF4Q8WZA2 1011 aa16.39■□□□□ 0.21
HMGB2-205ENST00000511316 BCL11BQ9C0K0 894 aaPredicted RBP16.39■□□□□ 0.21
HMGB2-205ENST00000511316 TNS1Q9HBL0 1735 aaKnown RBP16.39■□□□□ 0.21
HMGB2-205ENST00000511316 RGPD1P0DJD0 1748 aa16.38■□□□□ 0.21
HMGB2-205ENST00000511316 PROM2Q8N271 834 aa16.38■□□□□ 0.21
HMGB2-205ENST00000511316 TATP17735 454 aaPredicted RBP16.38■□□□□ 0.21
HMGB2-205ENST00000511316 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.38■□□□□ 0.216e-9■■■□□ 16.1
HMGB2-205ENST00000511316 APBA3O96018 575 aa16.37■□□□□ 0.21
HMGB2-205ENST00000511316 BECN1Q14457 450 aa16.37■□□□□ 0.21
HMGB2-205ENST00000511316 EZH2Q15910 746 aaKnown RBP16.37■□□□□ 0.21
HMGB2-205ENST00000511316 C8orf34Q49A92 452 aa16.37■□□□□ 0.21
HMGB2-205ENST00000511316 PLSCR1O15162 318 aa16.36■□□□□ 0.21
HMGB2-205ENST00000511316 NKX1-1Q15270 411 aaPredicted RBP16.36■□□□□ 0.21
HMGB2-205ENST00000511316 NFKBIBQ15653 356 aa16.36■□□□□ 0.21
HMGB2-205ENST00000511316 ACSBG1Q96GR2 724 aa16.36■□□□□ 0.21
HMGB2-205ENST00000511316 SULT6B1Q6IMI4 303 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms