RNA–Protein interactions for RNA: ENST00000511019.1

TRIO-217, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 430 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-217ENST00000511019 NHSQ6T4R5 1651 aa11.63□□□□□ -0.55
TRIO-217ENST00000511019 KCNA4P22459 653 aa11.63□□□□□ -0.55
TRIO-217ENST00000511019 POLD1P28340 1107 aa11.63□□□□□ -0.55
TRIO-217ENST00000511019 KCNQ4P56696 695 aa11.63□□□□□ -0.55
TRIO-217ENST00000511019 LTN1O94822 1766 aa11.63□□□□□ -0.55
TRIO-217ENST00000511019 CGNL1Q0VF96 1302 aa11.62□□□□□ -0.55
TRIO-217ENST00000511019 TATP17735 454 aaPredicted RBP11.62□□□□□ -0.55
TRIO-217ENST00000511019 HMGB2P26583 209 aaKnown RBP11.61□□□□□ -0.55
TRIO-217ENST00000511019 GPR162Q16538 588 aa11.61□□□□□ -0.55
TRIO-217ENST00000511019 HSP90AB2PQ58FF8 381 aa11.61□□□□□ -0.55
TRIO-217ENST00000511019 PPP4R3CPQ6ZMV5 832 aa11.61□□□□□ -0.55
TRIO-217ENST00000511019 KLHL34Q8N239 644 aa11.61□□□□□ -0.55
TRIO-217ENST00000511019 USHBP1Q8N6Y0 703 aa11.61□□□□□ -0.55
TRIO-217ENST00000511019 CCNL1Q9UK58 526 aaPredicted RBP11.61□□□□□ -0.55
TRIO-217ENST00000511019 PNPLA7Q6ZV29 1317 aa11.6□□□□□ -0.55
TRIO-217ENST00000511019 SMG6Q86US8 1419 aaKnown RBP11.6□□□□□ -0.55
TRIO-217ENST00000511019 RTL1A6NKG5 1358 aa11.59□□□□□ -0.55
TRIO-217ENST00000511019 USP47Q96K76 1375 aa11.59□□□□□ -0.55
TRIO-217ENST00000511019 ZNF784Q8NCA9 323 aaPredicted RBP11.59□□□□□ -0.55
TRIO-217ENST00000511019 CARD14Q9BXL6 1004 aa11.59□□□□□ -0.55
TRIO-217ENST00000511019 MYOM1P52179 1685 aa11.59□□□□□ -0.55
TRIO-217ENST00000511019 BTAF1O14981 1849 aa11.58□□□□□ -0.56
TRIO-217ENST00000511019 INSRP06213 1382 aa11.58□□□□□ -0.56
TRIO-217ENST00000511019 MPRIPQ6WCQ1 1025 aa11.58□□□□□ -0.56
TRIO-217ENST00000511019 TIMELESSQ9UNS1 1208 aa11.58□□□□□ -0.56
TRIO-217ENST00000511019 MAP3K5Q99683 1374 aa11.57□□□□□ -0.56
TRIO-217ENST00000511019 PPM1GO15355 546 aaPredicted RBP11.57□□□□□ -0.56
TRIO-217ENST00000511019 COL23A1Q86Y22 540 aaPredicted RBP11.57□□□□□ -0.56
TRIO-217ENST00000511019 PELP1Q8IZL8 1130 aaKnown RBP11.57□□□□□ -0.56
TRIO-217ENST00000511019 NSD2O96028 1365 aa11.56□□□□□ -0.56
TRIO-217ENST00000511019 KIF24Q5T7B8 1368 aa11.56□□□□□ -0.56
TRIO-217ENST00000511019 MEGF6O75095 1541 aa11.56□□□□□ -0.56
TRIO-217ENST00000511019 KAT6BQ8WYB5 2073 aa11.56□□□□□ -0.56
TRIO-217ENST00000511019 PAPPAQ13219 1627 aa11.56□□□□□ -0.56
TRIO-217ENST00000511019 PCDH11XQ9BZA7 1347 aa11.56□□□□□ -0.56
TRIO-217ENST00000511019 PCDH11YQ9BZA8 1340 aa11.56□□□□□ -0.56
TRIO-217ENST00000511019 FAM208AQ9UK61 1670 aaKnown RBP11.55□□□□□ -0.56
TRIO-217ENST00000511019 FLT4P35916 1363 aa11.55□□□□□ -0.56
TRIO-217ENST00000511019 FLAD1Q8NFF5 587 aa11.55□□□□□ -0.56
TRIO-217ENST00000511019 SMARCC1Q92922 1105 aaPredicted RBP11.55□□□□□ -0.56
TRIO-217ENST00000511019 SPG7Q9UQ90 795 aa11.55□□□□□ -0.56
TRIO-217ENST00000511019 CYP27B1O15528 508 aa11.54□□□□□ -0.56
TRIO-217ENST00000511019 EMILIN1Q9Y6C2 1016 aa11.54□□□□□ -0.56
TRIO-217ENST00000511019 GRIN3BO60391 1043 aa11.53□□□□□ -0.56
TRIO-217ENST00000511019 NLGN2Q8NFZ4 835 aa11.53□□□□□ -0.56
TRIO-217ENST00000511019 POLR3GLQ9BT43 218 aa11.53□□□□□ -0.56
TRIO-217ENST00000511019 WASHC2AQ641Q2 1341 aa11.53□□□□□ -0.56
TRIO-217ENST00000511019 NKX1-1Q15270 411 aaPredicted RBP11.52□□□□□ -0.57
TRIO-217ENST00000511019 MSL1Q68DK7 614 aa11.52□□□□□ -0.57
TRIO-217ENST00000511019 PCGF6Q9BYE7 350 aa11.52□□□□□ -0.57
TRIO-217ENST00000511019 PALLDQ8WX93 1383 aa11.52□□□□□ -0.57
TRIO-217ENST00000511019 NSD3Q9BZ95 1437 aa11.52□□□□□ -0.57
TRIO-217ENST00000511019 PIGBQ92521 554 aa11.51□□□□□ -0.57
TRIO-217ENST00000511019 AK7Q96M32 723 aa11.51□□□□□ -0.57
TRIO-217ENST00000511019 EYA1Q99502 592 aa11.51□□□□□ -0.57
TRIO-217ENST00000511019 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.51□□□□□ -0.577e-8■■■■□ 20.2
TRIO-217ENST00000511019 POLKQ9UBT6 870 aa11.51□□□□□ -0.57
TRIO-217ENST00000511019 RGPD2P0DJD1 1756 aa11.5□□□□□ -0.57
TRIO-217ENST00000511019 C1QTNF8P60827 252 aa11.5□□□□□ -0.57
TRIO-217ENST00000511019 POTEDQ86YR6 584 aa11.5□□□□□ -0.57
TRIO-217ENST00000511019 IFNL2Q8IZJ0 200 aa11.5□□□□□ -0.57
TRIO-217ENST00000511019 CD2APQ9Y5K6 639 aa11.5□□□□□ -0.57
TRIO-217ENST00000511019 DOT1LQ8TEK3 1739 aa11.49□□□□□ -0.57
TRIO-217ENST00000511019 TNNT2P45379 298 aaPredicted RBP11.49□□□□□ -0.57
TRIO-217ENST00000511019 TMOD3Q9NYL9 352 aa11.49□□□□□ -0.57
TRIO-217ENST00000511019 LOC102724428A0A0B4J2F2 783 aa11.48□□□□□ -0.57
TRIO-217ENST00000511019 PHF14O94880 888 aa11.48□□□□□ -0.57
TRIO-217ENST00000511019 YBX3P16989 372 aaKnown RBP eCLIP11.48□□□□□ -0.57
TRIO-217ENST00000511019 SIK1P57059 783 aa11.48□□□□□ -0.57
TRIO-217ENST00000511019 LY75O60449 1722 aa11.48□□□□□ -0.57
TRIO-217ENST00000511019 QSER1Q2KHR3 1735 aa11.47□□□□□ -0.57
TRIO-217ENST00000511019 CLSPNQ9HAW4 1339 aa11.47□□□□□ -0.57
TRIO-217ENST00000511019 SENP3-EIF4A1A0A087X0R7 540 aa11.47□□□□□ -0.57
TRIO-217ENST00000511019 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.47□□□□□ -0.57
TRIO-217ENST00000511019 PHKG2P15735 406 aa11.47□□□□□ -0.57
TRIO-217ENST00000511019 ATP6V1AP38606 617 aa11.47□□□□□ -0.57
TRIO-217ENST00000511019 ASAP1Q9ULH1 1129 aa11.47□□□□□ -0.57
TRIO-217ENST00000511019 SHANK3Q9BYB0 1731 aa11.46□□□□□ -0.57
TRIO-217ENST00000511019 GIGYF1O75420 1035 aaPredicted RBP11.46□□□□□ -0.57
TRIO-217ENST00000511019 SSFA2P28290 1259 aa11.46□□□□□ -0.57
TRIO-217ENST00000511019 EIF4G2P78344 907 aaKnown RBP eCLIP11.46□□□□□ -0.57
TRIO-217ENST00000511019 EIF4A2Q14240 407 aaKnown RBP11.46□□□□□ -0.57
TRIO-217ENST00000511019 SMIM5Q71RC9 77 aa11.46□□□□□ -0.57
TRIO-217ENST00000511019 PANK3Q9H999 370 aa11.46□□□□□ -0.57
TRIO-217ENST00000511019 MAPK8IP2Q13387 824 aaPredicted RBP11.45□□□□□ -0.58
TRIO-217ENST00000511019 NCBP3Q53F19 620 aaKnown RBP11.45□□□□□ -0.58
TRIO-217ENST00000511019 PLEKHO1Q53GL0 409 aaPredicted RBP11.45□□□□□ -0.58
TRIO-217ENST00000511019 LINC00116Q8NCU8 138 aa11.45□□□□□ -0.58
TRIO-217ENST00000511019 ATG3Q9NT62 314 aa11.45□□□□□ -0.58
TRIO-217ENST00000511019 COL24A1Q17RW2 1714 aa11.44□□□□□ -0.58
TRIO-217ENST00000511019 GNPATO15228 680 aa11.44□□□□□ -0.58
TRIO-217ENST00000511019 HSP90AB1P08238 724 aaKnown RBP11.44□□□□□ -0.58
TRIO-217ENST00000511019 AMIGO3Q86WK7 504 aa11.44□□□□□ -0.58
TRIO-217ENST00000511019 KIF20BQ96Q89 1820 aa11.44□□□□□ -0.58
TRIO-217ENST00000511019 NCAPD2Q15021 1401 aa11.43□□□□□ -0.58
TRIO-217ENST00000511019 ERVV-2B6SEH9 535 aa11.43□□□□□ -0.58
TRIO-217ENST00000511019 HSPA5P11021 654 aaKnown RBP11.43□□□□□ -0.58
TRIO-217ENST00000511019 ITPK1Q13572 414 aa11.43□□□□□ -0.58
TRIO-217ENST00000511019 TRAPPC3LQ5T215 181 aa11.43□□□□□ -0.58
TRIO-217ENST00000511019 MORC1Q86VD1 984 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms