RNA–Protein interactions for RNA: ENST00000511009.1

MBD4-209, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-209ENST00000511009 ERFEQ4G0M1 354 aa8□□□□□ -1.13
MBD4-209ENST00000511009 ADAM32Q8TC27 787 aa8□□□□□ -1.13
MBD4-209ENST00000511009 MTMR7Q9Y216 660 aa8□□□□□ -1.13
MBD4-209ENST00000511009 FAM196BA6NMK8 535 aa7.99□□□□□ -1.13
MBD4-209ENST00000511009 USP17L15C9J2P7 530 aa7.99□□□□□ -1.13
MBD4-209ENST00000511009 USP17L10C9JJH3 530 aa7.99□□□□□ -1.13
MBD4-209ENST00000511009 USP17L13C9JLJ4 530 aa7.99□□□□□ -1.13
MBD4-209ENST00000511009 USP17L12C9JPN9 530 aa7.99□□□□□ -1.13
MBD4-209ENST00000511009 USP17L11C9JVI0 530 aa7.99□□□□□ -1.13
MBD4-209ENST00000511009 USP17L21D6R901 530 aa7.99□□□□□ -1.13
MBD4-209ENST00000511009 USP17L18D6R9N7 530 aa7.99□□□□□ -1.13
MBD4-209ENST00000511009 USP17L22D6RA61 530 aa7.99□□□□□ -1.13
MBD4-209ENST00000511009 USP17L17D6RBQ6 530 aa7.99□□□□□ -1.13
MBD4-209ENST00000511009 USP17L19D6RCP7 530 aa7.99□□□□□ -1.13
MBD4-209ENST00000511009 USP17L20D6RJB6 530 aa7.99□□□□□ -1.13
MBD4-209ENST00000511009 ATP5J2-PTCD1G3V325 749 aa7.99□□□□□ -1.13
MBD4-209ENST00000511009 CAPN5O15484 640 aaPredicted RBP7.99□□□□□ -1.13
MBD4-209ENST00000511009 LZTS3O60299 673 aaPredicted RBP7.99□□□□□ -1.13
MBD4-209ENST00000511009 BMP1P13497 986 aa7.99□□□□□ -1.13
MBD4-209ENST00000511009 RASA1P20936 1047 aa7.99□□□□□ -1.13
MBD4-209ENST00000511009 USP17L24Q0WX57 530 aa7.99□□□□□ -1.13
MBD4-209ENST00000511009 EML3Q32P44 896 aa7.99□□□□□ -1.13
MBD4-209ENST00000511009 TMEM164Q5U3C3 297 aa7.99□□□□□ -1.13
MBD4-209ENST00000511009 DZIP3Q86Y13 1208 aaKnown RBP7.99□□□□□ -1.13
MBD4-209ENST00000511009 PLPP7Q8NBV4 271 aa7.99□□□□□ -1.13
MBD4-209ENST00000511009 RGS22Q8NE09 1264 aa7.99□□□□□ -1.13
MBD4-209ENST00000511009 STK32AQ8WU08 396 aa7.99□□□□□ -1.13
MBD4-209ENST00000511009 C11orf95C9JLR9 678 aaPredicted RBP7.98□□□□□ -1.13
MBD4-209ENST00000511009 NR5A1Q13285 461 aa7.98□□□□□ -1.13
MBD4-209ENST00000511009 LCE2CQ5TA81 110 aa7.98□□□□□ -1.13
MBD4-209ENST00000511009 ZMIZ1Q9ULJ6 1067 aa7.98□□□□□ -1.13
MBD4-209ENST00000511009 MAGEB6P1A0A0J9YX57 407 aa7.97□□□□□ -1.13
MBD4-209ENST00000511009 AGERQ15109 404 aa7.97□□□□□ -1.13
MBD4-209ENST00000511009 MAP7D1Q3KQU3 841 aa7.97□□□□□ -1.13
MBD4-209ENST00000511009 FAM200AQ8TCP9 573 aa7.97□□□□□ -1.13
MBD4-209ENST00000511009 CARD14Q9BXL6 1004 aa7.97□□□□□ -1.13
MBD4-209ENST00000511009 WDR4P57081 412 aaKnown RBP7.96□□□□□ -1.14
MBD4-209ENST00000511009 CRTC2Q53ET0 693 aaPredicted RBP7.96□□□□□ -1.14
MBD4-209ENST00000511009 CCER1Q8TC90 406 aaPredicted RBP7.96□□□□□ -1.14
MBD4-209ENST00000511009 ITPKCQ96DU7 683 aa7.96□□□□□ -1.14
MBD4-209ENST00000511009 ZFAND3Q9H8U3 227 aa7.96□□□□□ -1.14
MBD4-209ENST00000511009 ARID5BQ14865 1188 aa7.95□□□□□ -1.14
MBD4-209ENST00000511009 CCDC27Q2M243 656 aa7.95□□□□□ -1.14
MBD4-209ENST00000511009 SND1Q7KZF4 910 aaKnown RBP eCLIP7.95□□□□□ -1.14
MBD4-209ENST00000511009 TRIM50Q86XT4 487 aa7.95□□□□□ -1.14
MBD4-209ENST00000511009 PHTF2Q8N3S3 785 aa7.95□□□□□ -1.14
MBD4-209ENST00000511009 SENP2Q9HC62 589 aa7.95□□□□□ -1.14
MBD4-209ENST00000511009 ATP1A2P50993 1020 aa7.94□□□□□ -1.14
MBD4-209ENST00000511009 NFX1Q12986 1120 aaKnown RBP7.94□□□□□ -1.14
MBD4-209ENST00000511009 PTK7Q13308 1070 aa7.94□□□□□ -1.14
MBD4-209ENST00000511009 FOXD4L5Q5VV16 416 aaPredicted RBP7.94□□□□□ -1.14
MBD4-209ENST00000511009 FOXD4L4Q8WXT5 416 aaPredicted RBP7.94□□□□□ -1.14
MBD4-209ENST00000511009 CDCA7Q9BWT1 371 aaPredicted RBP7.94□□□□□ -1.14
MBD4-209ENST00000511009 DOLKQ9UPQ8 538 aa7.94□□□□□ -1.14
MBD4-209ENST00000511009 NOD1Q9Y239 953 aa7.94□□□□□ -1.14
MBD4-209ENST00000511009 FSHRP23945 695 aa7.93□□□□□ -1.14
MBD4-209ENST00000511009 TREML4Q6UXN2 200 aa7.93□□□□□ -1.14
MBD4-209ENST00000511009 ANKMY2Q8IV38 441 aa7.93□□□□□ -1.14
MBD4-209ENST00000511009 OGFOD1Q8N543 542 aa7.93□□□□□ -1.14
MBD4-209ENST00000511009 KIFC2Q96AC6 838 aa7.93□□□□□ -1.14
MBD4-209ENST00000511009 ZFP42Q96MM3 310 aa7.93□□□□□ -1.14
MBD4-209ENST00000511009 GNEQ9Y223 722 aaKnown RBP7.93□□□□□ -1.14
MBD4-209ENST00000511009 RBM19Q9Y4C8 960 aaKnown RBP7.93□□□□□ -1.14
MBD4-209ENST00000511009 ZIC2O95409 532 aaPredicted RBP7.92□□□□□ -1.14
MBD4-209ENST00000511009 OXLD1Q5BKU9 147 aa7.92□□□□□ -1.14
MBD4-209ENST00000511009 RNF20Q5VTR2 975 aa7.92□□□□□ -1.14
MBD4-209ENST00000511009 MRPL14Q6P1L8 145 aaKnown RBP7.92□□□□□ -1.14
MBD4-209ENST00000511009 VASH1Q7L8A9 365 aaPredicted RBP7.92□□□□□ -1.14
MBD4-209ENST00000511009 SLC10A4Q96EP9 437 aa7.92□□□□□ -1.14
MBD4-209ENST00000511009 ZNF594Q96JF6 807 aaPredicted RBP7.92□□□□□ -1.14
MBD4-209ENST00000511009 DNAAF2Q9NVR5 837 aaKnown RBP7.92□□□□□ -1.14
MBD4-209ENST00000511009 DPYDQ12882 1025 aa7.91□□□□□ -1.14
MBD4-209ENST00000511009 MEIOBQ8N635 442 aa7.91□□□□□ -1.14
MBD4-209ENST00000511009 CHIC2Q9UKJ5 165 aa7.91□□□□□ -1.14
MBD4-209ENST00000511009 ARID4AP29374 1257 aaPredicted RBP7.9□□□□□ -1.14
MBD4-209ENST00000511009 RBM25P49756 843 aaKnown RBP7.9□□□□□ -1.14
MBD4-209ENST00000511009 CCDC116Q8IYX3 515 aa7.9□□□□□ -1.14
MBD4-209ENST00000511009 CLP1Q92989 425 aaKnown RBP7.9□□□□□ -1.14
MBD4-209ENST00000511009 KCTD15Q96SI1 283 aaPredicted RBP7.9□□□□□ -1.14
MBD4-209ENST00000511009 ESPNB1AK53 854 aa7.89□□□□□ -1.15
MBD4-209ENST00000511009 GIGYF1O75420 1035 aaPredicted RBP7.89□□□□□ -1.15
MBD4-209ENST00000511009 ATP2B4P23634 1241 aa7.89□□□□□ -1.15
MBD4-209ENST00000511009 SSFA2P28290 1259 aa7.89□□□□□ -1.15
MBD4-209ENST00000511009 CLDN10P78369 228 aa7.89□□□□□ -1.15
MBD4-209ENST00000511009 PSME1Q06323 249 aa7.89□□□□□ -1.15
MBD4-209ENST00000511009 SWI5Q1ZZU3 235 aa7.89□□□□□ -1.15
MBD4-209ENST00000511009 NBPF20Q3BBV1 942 aa7.89□□□□□ -1.15
MBD4-209ENST00000511009 TSGA10IPQ3SY00 556 aa7.89□□□□□ -1.15
MBD4-209ENST00000511009 INTS6LQ5JSJ4 861 aaKnown RBP7.89□□□□□ -1.15
MBD4-209ENST00000511009 LARGE2Q8N3Y3 721 aa7.89□□□□□ -1.15
MBD4-209ENST00000511009 CCDC85AQ96PX6 553 aaPredicted RBP7.89□□□□□ -1.15
MBD4-209ENST00000511009 GTF2IP78347 998 aa7.88□□□□□ -1.15
MBD4-209ENST00000511009 PPP1R26Q5T8A7 1209 aaPredicted RBP7.88□□□□□ -1.15
MBD4-209ENST00000511009 Q6ZVU0 165 aa7.88□□□□□ -1.15
MBD4-209ENST00000511009 TXNDC2Q86VQ3 553 aa7.88□□□□□ -1.15
MBD4-209ENST00000511009 SIRT1Q96EB6 747 aa7.88□□□□□ -1.15
MBD4-209ENST00000511009 PURBQ96QR8 312 aaKnown RBP7.88□□□□□ -1.15
MBD4-209ENST00000511009 CDV3Q9UKY7 258 aaKnown RBP7.88□□□□□ -1.15
MBD4-209ENST00000511009 EMILIN1Q9Y6C2 1016 aa7.87□□□□□ -1.15
MBD4-209ENST00000511009 TERTO14746 1132 aaKnown RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms