RNA–Protein interactions for RNA: ENST00000510195.1

SNF8-208, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-208ENST00000510195 MEGF6O75095 1541 aa36.88■■■■□ 3.49
SNF8-208ENST00000510195 PPP1R1BQ9UD71 204 aaPredicted RBP36.85■■■■□ 3.49
SNF8-208ENST00000510195 HSPA5P11021 654 aaKnown RBP36.83■■■■□ 3.49
SNF8-208ENST00000510195 TATP17735 454 aaPredicted RBP36.83■■■■□ 3.49
SNF8-208ENST00000510195 SLC27A3Q5K4L6 730 aa36.82■■■■□ 3.48
SNF8-208ENST00000510195 EMILIN1Q9Y6C2 1016 aa36.82■■■■□ 3.48
SNF8-208ENST00000510195 SHANK3Q9BYB0 1731 aa36.82■■■■□ 3.48
SNF8-208ENST00000510195 USHBP1Q8N6Y0 703 aa36.81■■■■□ 3.48
SNF8-208ENST00000510195 PRIM1P49642 420 aaKnown RBP36.8■■■■□ 3.48
SNF8-208ENST00000510195 POLR3GLQ9BT43 218 aa36.79■■■■□ 3.48
SNF8-208ENST00000510195 PDGFDQ9GZP0 370 aaPredicted RBP36.79■■■■□ 3.48
SNF8-208ENST00000510195 PAPPAQ13219 1627 aa36.78■■■■□ 3.48
SNF8-208ENST00000510195 SYTL4Q96C24 671 aaPredicted RBP36.78■■■■□ 3.48
SNF8-208ENST00000510195 WASHC2AQ641Q2 1341 aa36.78■■■■□ 3.48
SNF8-208ENST00000510195 LRRC4BQ9NT99 713 aa36.77■■■■□ 3.48
SNF8-208ENST00000510195 ANKRD26Q9UPS8 1709 aa36.76■■■■□ 3.48
SNF8-208ENST00000510195 PCDH11XQ9BZA7 1347 aa36.75■■■■□ 3.47
SNF8-208ENST00000510195 PCDH11YQ9BZA8 1340 aa36.75■■■■□ 3.47
SNF8-208ENST00000510195 DOT1LQ8TEK3 1739 aa36.74■■■■□ 3.47
SNF8-208ENST00000510195 ZBTB7AO95365 584 aa36.74■■■■□ 3.47
SNF8-208ENST00000510195 MAP2P11137 1827 aaKnown RBP36.73■■■■□ 3.47
SNF8-208ENST00000510195 PPM1GO15355 546 aaPredicted RBP36.73■■■■□ 3.47
SNF8-208ENST00000510195 MTFR1LQ9H019 292 aa36.73■■■■□ 3.47
SNF8-208ENST00000510195 NSD2O96028 1365 aa36.73■■■■□ 3.47
SNF8-208ENST00000510195 NCAPD2Q15021 1401 aa36.72■■■■□ 3.47
SNF8-208ENST00000510195 PTGER2P43116 358 aa36.71■■■■□ 3.47
SNF8-208ENST00000510195 POLKQ9UBT6 870 aa36.71■■■■□ 3.47
SNF8-208ENST00000510195 AKT1S1Q96B36 256 aa36.69■■■■□ 3.46
SNF8-208ENST00000510195 PANK3Q9H999 370 aa36.69■■■■□ 3.46
SNF8-208ENST00000510195 ATF5Q9Y2D1 282 aaPredicted RBP36.68■■■■□ 3.46
SNF8-208ENST00000510195 ZNF827Q17R98 1081 aa36.67■■■■□ 3.46
SNF8-208ENST00000510195 LY75O60449 1722 aa36.66■■■■□ 3.46
SNF8-208ENST00000510195 HMGB2P26583 209 aaKnown RBP36.64■■■■□ 3.46
SNF8-208ENST00000510195 DCAF8L1A6NGE4 600 aa36.63■■■■□ 3.45
SNF8-208ENST00000510195 CYP27B1O15528 508 aa36.63■■■■□ 3.45
SNF8-208ENST00000510195 EYA1Q99502 592 aa36.63■■■■□ 3.45
SNF8-208ENST00000510195 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP36.63■■■■□ 3.45
SNF8-208ENST00000510195 SLC16A10Q8TF71 515 aa36.62■■■■□ 3.45
SNF8-208ENST00000510195 SGIP1Q9BQI5 828 aa36.62■■■■□ 3.45
SNF8-208ENST00000510195 SPG7Q9UQ90 795 aa36.62■■■■□ 3.45
SNF8-208ENST00000510195 PKD1L3Q7Z443 1732 aa36.62■■■■□ 3.45
SNF8-208ENST00000510195 QSER1Q2KHR3 1735 aa36.61■■■■□ 3.45
SNF8-208ENST00000510195 PLEKHG2Q9H7P9 1386 aa36.59■■■■□ 3.45
SNF8-208ENST00000510195 CCNL1Q9UK58 526 aaPredicted RBP36.59■■■■□ 3.45
SNF8-208ENST00000510195 TNNT2P45379 298 aaPredicted RBP36.58■■■■□ 3.45
SNF8-208ENST00000510195 NKX1-1Q15270 411 aaPredicted RBP36.58■■■■□ 3.45
SNF8-208ENST00000510195 TFCP2L1Q9NZI6 479 aa36.57■■■■□ 3.44
SNF8-208ENST00000510195 EIF4A2Q14240 407 aaKnown RBP36.55■■■■□ 3.44
SNF8-208ENST00000510195 KCNQ4P56696 695 aa36.54■■■■□ 3.44
SNF8-208ENST00000510195 PNPLA7Q6ZV29 1317 aa36.54■■■■□ 3.44
SNF8-208ENST00000510195 MPRIPQ6WCQ1 1025 aa36.53■■■■□ 3.44
SNF8-208ENST00000510195 KNSTRNQ9Y448 316 aa36.53■■■■□ 3.44
SNF8-208ENST00000510195 SMARCC1Q92922 1105 aaPredicted RBP36.51■■■■□ 3.44
SNF8-208ENST00000510195 ARXQ96QS3 562 aa36.51■■■■□ 3.44
SNF8-208ENST00000510195 MORC1Q86VD1 984 aa36.5■■■■□ 3.43
SNF8-208ENST00000510195 SYT17Q9BSW7 474 aa36.5■■■■□ 3.43
SNF8-208ENST00000510195 FHDC1Q9C0D6 1143 aaPredicted RBP36.5■■■■□ 3.43
SNF8-208ENST00000510195 IFNL2Q8IZJ0 200 aa36.48■■■■□ 3.43
SNF8-208ENST00000510195 IGSF1Q8N6C5 1336 aa36.48■■■■□ 3.43
SNF8-208ENST00000510195 PALLDQ8WX93 1383 aa36.48■■■■□ 3.43
SNF8-208ENST00000510195 MAP3K5Q99683 1374 aa36.47■■■■□ 3.43
SNF8-208ENST00000510195 ITGB4P16144 1822 aa36.47■■■■□ 3.43
SNF8-208ENST00000510195 TOGARAM1Q9Y4F4 1720 aa36.46■■■■□ 3.43
SNF8-208ENST00000510195 TUBGCP6Q96RT7 1819 aa36.45■■■■□ 3.43
SNF8-208ENST00000510195 PHKG2P15735 406 aa36.44■■■■□ 3.42
SNF8-208ENST00000510195 POLD1P28340 1107 aa36.44■■■■□ 3.42
SNF8-208ENST00000510195 PIGBQ92521 554 aa36.44■■■■□ 3.42
SNF8-208ENST00000510195 COL24A1Q17RW2 1714 aa36.44■■■■□ 3.42
SNF8-208ENST00000510195 KIF7Q2M1P5 1343 aa36.43■■■■□ 3.42
SNF8-208ENST00000510195 C5P01031 1676 aa36.4■■■■□ 3.42
SNF8-208ENST00000510195 FLAD1Q8NFF5 587 aa36.4■■■■□ 3.42
SNF8-208ENST00000510195 YY1P25490 414 aa36.39■■■■□ 3.42
SNF8-208ENST00000510195 AMER1Q5JTC6 1135 aaPredicted RBP36.39■■■■□ 3.42
SNF8-208ENST00000510195 TMOD3Q9NYL9 352 aa36.39■■■■□ 3.42
SNF8-208ENST00000510195 TAF1LQ8IZX4 1826 aa36.37■■■■□ 3.41
SNF8-208ENST00000510195 UTRNP46939 3433 aa36.36■■■■□ 3.41
SNF8-208ENST00000510195 AMOTQ4VCS5 1084 aa36.36■■■■□ 3.41
SNF8-208ENST00000510195 COL23A1Q86Y22 540 aaPredicted RBP36.36■■■■□ 3.41
SNF8-208ENST00000510195 HSP90AB1P08238 724 aaKnown RBP36.35■■■■□ 3.41
SNF8-208ENST00000510195 PLEKHO1Q53GL0 409 aaPredicted RBP36.35■■■■□ 3.41
SNF8-208ENST00000510195 MSH5O43196 834 aa36.32■■■■□ 3.4
SNF8-208ENST00000510195 ERVV-2B6SEH9 535 aa36.31■■■■□ 3.4
SNF8-208ENST00000510195 DCAF5Q96JK2 942 aa36.31■■■■□ 3.4
SNF8-208ENST00000510195 LOC102724428A0A0B4J2F2 783 aa36.3■■■■□ 3.4
SNF8-208ENST00000510195 PER1O15534 1290 aaPredicted RBP36.3■■■■□ 3.4
SNF8-208ENST00000510195 SIK1P57059 783 aa36.3■■■■□ 3.4
SNF8-208ENST00000510195 C4BP0C0L5 1744 aa36.29■■■■□ 3.4
SNF8-208ENST00000510195 AK7Q96M32 723 aa36.29■■■■□ 3.4
SNF8-208ENST00000510195 ASAP1Q9ULH1 1129 aa36.28■■■■□ 3.4
SNF8-208ENST00000510195 IL13P35225 146 aa36.27■■■■□ 3.4
SNF8-208ENST00000510195 KDRP35968 1356 aa36.27■■■■□ 3.4
SNF8-208ENST00000510195 ZNF530Q6P9A1 599 aaPredicted RBP36.24■■■■□ 3.39
SNF8-208ENST00000510195 ATG3Q9NT62 314 aa36.24■■■■□ 3.39
SNF8-208ENST00000510195 SULT6B1Q6IMI4 303 aa36.23■■■■□ 3.39
SNF8-208ENST00000510195 AEBP1Q8IUX7 1158 aa36.23■■■■□ 3.39
SNF8-208ENST00000510195 SSFA2P28290 1259 aa36.21■■■■□ 3.39
SNF8-208ENST00000510195 ATP6V1AP38606 617 aa36.21■■■■□ 3.39
SNF8-208ENST00000510195 MTHFSP49914 203 aa36.2■■■■□ 3.39
SNF8-208ENST00000510195 C1orf141Q5JVX7 400 aa36.2■■■■□ 3.39
SNF8-208ENST00000510195 NPC1L1Q9UHC9 1359 aa36.19■■■■□ 3.38
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms