RNA–Protein interactions for RNA: ENST00000510098.1

CAST-229, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,323 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-229ENST00000510098 FIGNL2A6NMB9 653 aa7.77□□□□□ -1.17
CAST-229ENST00000510098 TTLL8A6PVC2 850 aa7.77□□□□□ -1.17
CAST-229ENST00000510098 VSIG8P0DPA2 414 aa7.77□□□□□ -1.17
CAST-229ENST00000510098 PTGIRP43119 386 aa7.77□□□□□ -1.17
CAST-229ENST00000510098 SEMA3FQ13275 785 aa7.77□□□□□ -1.17
CAST-229ENST00000510098 SLFNL1Q499Z3 407 aa7.77□□□□□ -1.17
CAST-229ENST00000510098 IRF7Q92985 503 aa7.77□□□□□ -1.17
CAST-229ENST00000510098 CLUAP1Q96AJ1 413 aa7.77□□□□□ -1.17
CAST-229ENST00000510098 DNMT3LQ9UJW3 386 aa7.77□□□□□ -1.17
CAST-229ENST00000510098 LORP23490 312 aaPredicted RBP7.76□□□□□ -1.17
CAST-229ENST00000510098 CTSOP43234 321 aaPredicted RBP7.76□□□□□ -1.17
CAST-229ENST00000510098 ERBB4Q15303 1308 aa7.75□□□□□ -1.17
CAST-229ENST00000510098 POM121CA8CG34 1229 aa7.75□□□□□ -1.17
CAST-229ENST00000510098 SOX11P35716 441 aa7.75□□□□□ -1.17
CAST-229ENST00000510098 GMPRP36959 345 aa7.75□□□□□ -1.17
CAST-229ENST00000510098 RNF135Q8IUD6 432 aa7.75□□□□□ -1.17
CAST-229ENST00000510098 ESF1Q9H501 851 aaKnown RBP7.75□□□□□ -1.17
CAST-229ENST00000510098 POLMQ9NP87 494 aaPredicted RBP7.75□□□□□ -1.17
CAST-229ENST00000510098 ATP5J2-PTCD1G3V325 749 aa7.74□□□□□ -1.17
CAST-229ENST00000510098 OSBPL3Q9H4L5 887 aa7.74□□□□□ -1.17
CAST-229ENST00000510098 ALG2Q9H553 416 aa7.74□□□□□ -1.17
CAST-229ENST00000510098 CHIC2Q9UKJ5 165 aa7.74□□□□□ -1.17
CAST-229ENST00000510098 TRAK2O60296 914 aa7.73□□□□□ -1.17
CAST-229ENST00000510098 VEGFBP49765 207 aa7.73□□□□□ -1.17
CAST-229ENST00000510098 DOLKQ9UPQ8 538 aa7.73□□□□□ -1.17
CAST-229ENST00000510098 A0A1W2PRU2 124 aa7.72□□□□□ -1.17
CAST-229ENST00000510098 PIK3CDO00329 1044 aa7.72□□□□□ -1.17
CAST-229ENST00000510098 MYCP01106 439 aaPredicted RBP7.72□□□□□ -1.17
CAST-229ENST00000510098 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.72□□□□□ -1.172e-9■■□□□ 12.7
CAST-229ENST00000510098 CYP2U1Q7Z449 544 aa7.72□□□□□ -1.17
CAST-229ENST00000510098 OXLD1Q5BKU9 147 aa7.71□□□□□ -1.18
CAST-229ENST00000510098 FOXD4L5Q5VV16 416 aaPredicted RBP7.71□□□□□ -1.18
CAST-229ENST00000510098 FNBP4Q8N3X1 1017 aaPredicted RBP7.71□□□□□ -1.18
CAST-229ENST00000510098 RNF217Q8TC41 542 aa7.71□□□□□ -1.18
CAST-229ENST00000510098 ADAMTS19Q8TE59 1207 aa7.71□□□□□ -1.18
CAST-229ENST00000510098 MEN1O00255 615 aa7.7□□□□□ -1.18
CAST-229ENST00000510098 USP4Q13107 963 aa7.7□□□□□ -1.18
CAST-229ENST00000510098 HDGFL1Q5TGJ6 251 aa7.7□□□□□ -1.18
CAST-229ENST00000510098 PROSER2Q86WR7 435 aaPredicted RBP7.7□□□□□ -1.18
CAST-229ENST00000510098 PLPP7Q8NBV4 271 aa7.7□□□□□ -1.18
CAST-229ENST00000510098 ZMYND15Q9H091 742 aa7.7□□□□□ -1.18
CAST-229ENST00000510098 ARHGEF10LQ9HCE6 1279 aa7.7□□□□□ -1.18
CAST-229ENST00000510098 PPFIA3O75145 1194 aa7.69□□□□□ -1.18
CAST-229ENST00000510098 RNF144AP50876 292 aaPredicted RBP7.69□□□□□ -1.18
CAST-229ENST00000510098 PTSQ03393 145 aa7.69□□□□□ -1.18
CAST-229ENST00000510098 MAP7D1Q3KQU3 841 aa7.69□□□□□ -1.18
CAST-229ENST00000510098 A6NJR5 290 aa7.68□□□□□ -1.18
CAST-229ENST00000510098 RAB6BQ9NRW1 208 aa7.68□□□□□ -1.18
CAST-229ENST00000510098 STAU1O95793 577 aaKnown RBP7.67□□□□□ -1.18
CAST-229ENST00000510098 GNRH1P01148 92 aa7.67□□□□□ -1.18
CAST-229ENST00000510098 SKIP12755 728 aa7.67□□□□□ -1.18
CAST-229ENST00000510098 CLN3Q13286 438 aa7.67□□□□□ -1.18
CAST-229ENST00000510098 PRICKLE2Q7Z3G6 844 aa7.67□□□□□ -1.18
CAST-229ENST00000510098 NLRP3Q96P20 1036 aa7.67□□□□□ -1.18
CAST-229ENST00000510098 LYSMD3Q7Z3D4 306 aa7.66□□□□□ -1.18
CAST-229ENST00000510098 ZSCAN1Q8NBB4 408 aa7.66□□□□□ -1.18
CAST-229ENST00000510098 SIRT1Q96EB6 747 aa7.66□□□□□ -1.18
CAST-229ENST00000510098 IL2RAP01589 272 aa7.65□□□□□ -1.18
CAST-229ENST00000510098 CCDC155Q8N6L0 562 aa7.65□□□□□ -1.18
CAST-229ENST00000510098 NFATC2IPQ8NCF5 419 aa7.65□□□□□ -1.18
CAST-229ENST00000510098 CNKSR1Q969H4 720 aa7.65□□□□□ -1.18
CAST-229ENST00000510098 UCN2Q96RP3 112 aa7.65□□□□□ -1.18
CAST-229ENST00000510098 SENP3-EIF4A1A0A087X0R7 540 aa7.64□□□□□ -1.19
CAST-229ENST00000510098 SLC35F4A4IF30 521 aa7.64□□□□□ -1.19
CAST-229ENST00000510098 RHOQP17081 205 aa7.64□□□□□ -1.19
CAST-229ENST00000510098 GPC1P35052 558 aa7.64□□□□□ -1.19
CAST-229ENST00000510098 SLC27A3Q5K4L6 730 aa7.64□□□□□ -1.19
CAST-229ENST00000510098 DEPDC4Q8N2C3 294 aa7.64□□□□□ -1.19
CAST-229ENST00000510098 NANOS1Q8WY41 292 aaKnown RBP7.64□□□□□ -1.19
CAST-229ENST00000510098 GLMNQ92990 594 aa7.64□□□□□ -1.19
CAST-229ENST00000510098 ESYT1Q9BSJ8 1104 aa7.64□□□□□ -1.19
CAST-229ENST00000510098 GRIP2Q9C0E4 1043 aa7.64□□□□□ -1.19
CAST-229ENST00000510098 SUPT5HO00267 1087 aaKnown RBP7.63□□□□□ -1.19
CAST-229ENST00000510098 CENPCQ03188 943 aa7.63□□□□□ -1.19
CAST-229ENST00000510098 TBC1D9Q6ZT07 1266 aa7.63□□□□□ -1.19
CAST-229ENST00000510098 XAGE2Q96GT9 111 aa7.63□□□□□ -1.19
CAST-229ENST00000510098 ETNK1Q9HBU6 452 aa7.63□□□□□ -1.19
CAST-229ENST00000510098 HRH3Q9Y5N1 445 aa7.63□□□□□ -1.19
CAST-229ENST00000510098 USP17L5A8MUK1 530 aa7.62□□□□□ -1.19
CAST-229ENST00000510098 POU4F2Q12837 409 aa7.62□□□□□ -1.19
CAST-229ENST00000510098 NCOA4Q13772 614 aa7.62□□□□□ -1.19
CAST-229ENST00000510098 ESCO1Q5FWF5 840 aa7.62□□□□□ -1.19
CAST-229ENST00000510098 FAM181BA6NEQ2 426 aa7.61□□□□□ -1.19
CAST-229ENST00000510098 SCNN1DP51172 638 aa7.61□□□□□ -1.19
CAST-229ENST00000510098 EML3Q32P44 896 aa7.61□□□□□ -1.19
CAST-229ENST00000510098 NOD1Q9Y239 953 aa7.61□□□□□ -1.19
CAST-229ENST00000510098 PCDHGA11Q9Y5H2 935 aa7.61□□□□□ -1.19
CAST-229ENST00000510098 ATP9BO43861 1147 aa7.6□□□□□ -1.19
CAST-229ENST00000510098 LZTS3O60299 673 aaPredicted RBP7.6□□□□□ -1.19
CAST-229ENST00000510098 CALR3Q96L12 384 aaKnown RBP7.6□□□□□ -1.19
CAST-229ENST00000510098 USP17L3A6NCW0 530 aa7.59□□□□□ -1.19
CAST-229ENST00000510098 USP17L4A6NCW7 530 aa7.59□□□□□ -1.19
CAST-229ENST00000510098 ITGA6P23229 1130 aa7.59□□□□□ -1.19
CAST-229ENST00000510098 GDF10P55107 478 aa7.59□□□□□ -1.19
CAST-229ENST00000510098 KRT76Q01546 638 aa7.59□□□□□ -1.19
CAST-229ENST00000510098 NBPF10Q6P3W6 841 aaKnown RBP7.59□□□□□ -1.19
CAST-229ENST00000510098 USP17L2Q6R6M4 530 aa7.59□□□□□ -1.19
CAST-229ENST00000510098 USP17L1Q7RTZ2 530 aa7.59□□□□□ -1.19
CAST-229ENST00000510098 NBPF15Q8N660 670 aa7.59□□□□□ -1.19
CAST-229ENST00000510098 GPR161Q8N6U8 529 aaKnown RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms