RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 SOX12O15370 315 aa15.93■□□□□ 0.14
SNF8-207ENST00000509995 SRPK2P78362 688 aaKnown RBP15.93■□□□□ 0.14
SNF8-207ENST00000509995 CCNL1Q9UK58 526 aaPredicted RBP15.93■□□□□ 0.14
SNF8-207ENST00000509995 KDM2AQ9Y2K7 1162 aa15.92■□□□□ 0.14
SNF8-207ENST00000509995 ANKRD36BQ8N2N9 1353 aa15.91■□□□□ 0.14
SNF8-207ENST00000509995 C16orf71Q8IYS4 520 aaPredicted RBP15.91■□□□□ 0.14
SNF8-207ENST00000509995 NLRP2Q9NX02 1062 aa15.91■□□□□ 0.14
SNF8-207ENST00000509995 TAF1LQ8IZX4 1826 aa15.91■□□□□ 0.14
SNF8-207ENST00000509995 LTN1O94822 1766 aa15.9■□□□□ 0.14
SNF8-207ENST00000509995 DCAF11Q8TEB1 546 aa15.9■□□□□ 0.14
SNF8-207ENST00000509995 SYTL4Q96C24 671 aaPredicted RBP15.9■□□□□ 0.14
SNF8-207ENST00000509995 CABP2Q9NPB3 220 aa15.9■□□□□ 0.14
SNF8-207ENST00000509995 PKD1L3Q7Z443 1732 aa15.88■□□□□ 0.13
SNF8-207ENST00000509995 KIAA1551Q9HCM1 1747 aa15.88■□□□□ 0.13
SNF8-207ENST00000509995 TOGARAM1Q9Y4F4 1720 aa15.88■□□□□ 0.13
SNF8-207ENST00000509995 PRIM1P49642 420 aaKnown RBP15.88■□□□□ 0.13
SNF8-207ENST00000509995 CABP1Q9NZU7 370 aa15.88■□□□□ 0.13
SNF8-207ENST00000509995 C10orf71Q711Q0 1435 aa15.87■□□□□ 0.13
SNF8-207ENST00000509995 TNRC6CQ9HCJ0 1690 aaKnown RBP15.87■□□□□ 0.13
SNF8-207ENST00000509995 FLAD1Q8NFF5 587 aa15.87■□□□□ 0.13
SNF8-207ENST00000509995 DDX54Q8TDD1 881 aaKnown RBP15.87■□□□□ 0.13
SNF8-207ENST00000509995 STAC3Q96MF2 364 aa15.87■□□□□ 0.13
SNF8-207ENST00000509995 KIF13BQ9NQT8 1826 aa15.87■□□□□ 0.13
SNF8-207ENST00000509995 TTC21BQ7Z4L5 1316 aa15.86■□□□□ 0.13
SNF8-207ENST00000509995 PLEKHG2Q9H7P9 1386 aa15.86■□□□□ 0.13
SNF8-207ENST00000509995 KIAA1210Q9ULL0 1709 aa15.85■□□□□ 0.13
SNF8-207ENST00000509995 N4BP2Q86UW6 1770 aaPredicted RBP15.85■□□□□ 0.13
SNF8-207ENST00000509995 UBR3Q6ZT12 1888 aa15.85■□□□□ 0.13
SNF8-207ENST00000509995 USP47Q96K76 1375 aa15.85■□□□□ 0.13
SNF8-207ENST00000509995 PXDNLA1KZ92 1463 aa15.84■□□□□ 0.13
SNF8-207ENST00000509995 FAM208AQ9UK61 1670 aaKnown RBP15.84■□□□□ 0.13
SNF8-207ENST00000509995 KCPQ6ZWJ8 1503 aa15.84■□□□□ 0.13
SNF8-207ENST00000509995 C4BP0C0L5 1744 aa15.83■□□□□ 0.13
SNF8-207ENST00000509995 BRCA1P38398 1863 aaKnown RBP15.83■□□□□ 0.12
SNF8-207ENST00000509995 TTC21AQ8NDW8 1320 aa15.83■□□□□ 0.12
SNF8-207ENST00000509995 ANKRD24Q8TF21 1146 aa15.82■□□□□ 0.12
SNF8-207ENST00000509995 SMC1BQ8NDV3 1235 aa15.81■□□□□ 0.12
SNF8-207ENST00000509995 KDM2BQ8NHM5 1336 aa15.8■□□□□ 0.12
SNF8-207ENST00000509995 CENPJQ9HC77 1338 aaPredicted RBP15.8■□□□□ 0.12
SNF8-207ENST00000509995 FAM161AQ3B820 660 aa15.8■□□□□ 0.12
SNF8-207ENST00000509995 BCS1LQ9Y276 419 aa15.8■□□□□ 0.12
SNF8-207ENST00000509995 ARFGEF1Q9Y6D6 1849 aa15.8■□□□□ 0.12
SNF8-207ENST00000509995 ARHGAP27Q6ZUM4 889 aa15.79■□□□□ 0.12
SNF8-207ENST00000509995 AMIGO3Q86WK7 504 aa15.79■□□□□ 0.12
SNF8-207ENST00000509995 MON2Q7Z3U7 1717 aa15.78■□□□□ 0.12
SNF8-207ENST00000509995 HMGB2P26583 209 aaKnown RBP15.78■□□□□ 0.12
SNF8-207ENST00000509995 C9orf131Q5VYM1 1079 aa15.78■□□□□ 0.12
SNF8-207ENST00000509995 ZNF692Q9BU19 519 aaPredicted RBP15.78■□□□□ 0.12
SNF8-207ENST00000509995 NSD3Q9BZ95 1437 aa15.77■□□□□ 0.12
SNF8-207ENST00000509995 AK7Q96M32 723 aa15.76■□□□□ 0.11
SNF8-207ENST00000509995 RRAGCQ9HB90 399 aa15.76■□□□□ 0.11
SNF8-207ENST00000509995 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.75■□□□□ 0.11
SNF8-207ENST00000509995 PHF14O94880 888 aa15.75■□□□□ 0.11
SNF8-207ENST00000509995 USP31Q70CQ4 1352 aa15.75■□□□□ 0.11
SNF8-207ENST00000509995 PALLDQ8WX93 1383 aa15.75■□□□□ 0.11
SNF8-207ENST00000509995 SBF1O95248 1867 aa15.74■□□□□ 0.11
SNF8-207ENST00000509995 TGFB2P61812 414 aa15.74■□□□□ 0.11
SNF8-207ENST00000509995 SMIM5Q71RC9 77 aa15.73■□□□□ 0.11
SNF8-207ENST00000509995 PRDM10Q9NQV6 1147 aa15.73■□□□□ 0.11
SNF8-207ENST00000509995 MEGF6O75095 1541 aa15.73■□□□□ 0.11
SNF8-207ENST00000509995 RGPD2P0DJD1 1756 aa15.72■□□□□ 0.11
SNF8-207ENST00000509995 A0A0G2JLW4 131 aa15.72■□□□□ 0.11
SNF8-207ENST00000509995 FCHSD2O94868 740 aa15.72■□□□□ 0.11
SNF8-207ENST00000509995 SSFA2P28290 1259 aa15.72■□□□□ 0.11
SNF8-207ENST00000509995 ZCRB1Q8TBF4 217 aaKnown RBP15.72■□□□□ 0.11
SNF8-207ENST00000509995 KTN1Q86UP2 1357 aaKnown RBP15.72■□□□□ 0.11
SNF8-207ENST00000509995 FOXN1O15353 648 aa15.71■□□□□ 0.11
SNF8-207ENST00000509995 NBPF1Q3BBV0 1214 aa15.71■□□□□ 0.11
SNF8-207ENST00000509995 MMP10P09238 476 aa15.7■□□□□ 0.1
SNF8-207ENST00000509995 RNF181Q9P0P0 153 aa15.7■□□□□ 0.1
SNF8-207ENST00000509995 EVC2Q86UK5 1308 aa15.69■□□□□ 0.1
SNF8-207ENST00000509995 ITGB4P16144 1822 aa15.69■□□□□ 0.1
SNF8-207ENST00000509995 MAP2P11137 1827 aaKnown RBP15.68■□□□□ 0.1
SNF8-207ENST00000509995 DPEP1P16444 411 aa15.67■□□□□ 0.1
SNF8-207ENST00000509995 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.67■□□□□ 0.1
SNF8-207ENST00000509995 LTV1Q96GA3 475 aaPredicted RBP15.67■□□□□ 0.1
SNF8-207ENST00000509995 C4AP0C0L4 1744 aa15.67■□□□□ 0.1
SNF8-207ENST00000509995 MLLT1Q03111 559 aaPredicted RBP15.66■□□□□ 0.1
SNF8-207ENST00000509995 NME9Q86XW9 330 aa15.66■□□□□ 0.1
SNF8-207ENST00000509995 ABHD8Q96I13 439 aa15.66■□□□□ 0.1
SNF8-207ENST00000509995 IP6K1Q92551 441 aa15.65■□□□□ 0.1
SNF8-207ENST00000509995 DCAF5Q96JK2 942 aa15.65■□□□□ 0.1
SNF8-207ENST00000509995 ZC3H4Q9UPT8 1303 aaKnown RBP15.65■□□□□ 0.1
SNF8-207ENST00000509995 CTCFP49711 727 aaPredicted RBP15.64■□□□□ 0.09
SNF8-207ENST00000509995 MKRN1Q9UHC7 482 aaKnown RBP15.64■□□□□ 0.09
SNF8-207ENST00000509995 SBNO2Q9Y2G9 1366 aa15.63■□□□□ 0.09
SNF8-207ENST00000509995 TIAM2Q8IVF5 1701 aa15.63■□□□□ 0.09
SNF8-207ENST00000509995 VEGFAP15692 232 aaPredicted RBP15.63■□□□□ 0.09
SNF8-207ENST00000509995 KCNA3P22001 575 aa15.63■□□□□ 0.09
SNF8-207ENST00000509995 MPRIPQ6WCQ1 1025 aa15.63■□□□□ 0.09
SNF8-207ENST00000509995 LINC00116Q8NCU8 138 aa15.63■□□□□ 0.09
SNF8-207ENST00000509995 SMARCC1Q92922 1105 aaPredicted RBP15.63■□□□□ 0.09
SNF8-207ENST00000509995 CREBZFQ9NS37 354 aa15.63■□□□□ 0.09
SNF8-207ENST00000509995 CCDC87Q9NVE4 849 aa15.63■□□□□ 0.09
SNF8-207ENST00000509995 GNPATO15228 680 aa15.62■□□□□ 0.09
SNF8-207ENST00000509995 AIDAQ96BJ3 306 aa15.61■□□□□ 0.09
SNF8-207ENST00000509995 CGNL1Q0VF96 1302 aa15.61■□□□□ 0.09
SNF8-207ENST00000509995 KDM6AO15550 1401 aaPredicted RBP15.6■□□□□ 0.09
SNF8-207ENST00000509995 CD163L1Q9NR16 1453 aa15.6■□□□□ 0.09
SNF8-207ENST00000509995 PDE4DIPQ5VU43 2346 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms