RNA–Protein interactions for RNA: ENST00000509994.2

SCARB2-204, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-204ENST00000509994 SLC15A2Q16348 729 aa14.05□□□□□ -0.16
SCARB2-204ENST00000509994 POTEDQ86YR6 584 aa14.05□□□□□ -0.16
SCARB2-204ENST00000509994 ZCRB1Q8TBF4 217 aaKnown RBP14.05□□□□□ -0.16
SCARB2-204ENST00000509994 PDGFDQ9GZP0 370 aaPredicted RBP14.05□□□□□ -0.16
SCARB2-204ENST00000509994 TIMELESSQ9UNS1 1208 aa14.05□□□□□ -0.16
SCARB2-204ENST00000509994 CLSPNQ9HAW4 1339 aa14.05□□□□□ -0.16
SCARB2-204ENST00000509994 MEGF6O75095 1541 aa14.04□□□□□ -0.16
SCARB2-204ENST00000509994 TATP17735 454 aaPredicted RBP14.03□□□□□ -0.16
SCARB2-204ENST00000509994 FLT4P35916 1363 aa14.03□□□□□ -0.16
SCARB2-204ENST00000509994 MAP2P11137 1827 aaKnown RBP14.03□□□□□ -0.16
SCARB2-204ENST00000509994 PRIM1P49642 420 aaKnown RBP14.02□□□□□ -0.17
SCARB2-204ENST00000509994 HSP90AB2PQ58FF8 381 aa14.02□□□□□ -0.17
SCARB2-204ENST00000509994 NBPF6Q5VWK0 638 aa14.02□□□□□ -0.17
SCARB2-204ENST00000509994 NBPF4Q96M43 638 aa14.02□□□□□ -0.17
SCARB2-204ENST00000509994 CGNL1Q0VF96 1302 aa14.01□□□□□ -0.17
SCARB2-204ENST00000509994 PAPPAQ13219 1627 aa14.01□□□□□ -0.17
SCARB2-204ENST00000509994 INSRP06213 1382 aa14□□□□□ -0.17
SCARB2-204ENST00000509994 CARD14Q9BXL6 1004 aa14□□□□□ -0.17
SCARB2-204ENST00000509994 EMILIN1Q9Y6C2 1016 aa14□□□□□ -0.17
SCARB2-204ENST00000509994 ANKRD26Q9UPS8 1709 aa13.99□□□□□ -0.17
SCARB2-204ENST00000509994 PCDH11XQ9BZA7 1347 aa13.99□□□□□ -0.17
SCARB2-204ENST00000509994 PCDH11YQ9BZA8 1340 aa13.99□□□□□ -0.17
SCARB2-204ENST00000509994 TNNT2P45379 298 aaPredicted RBP13.99□□□□□ -0.17
SCARB2-204ENST00000509994 KCNQ4P56696 695 aa13.99□□□□□ -0.17
SCARB2-204ENST00000509994 EIF4G2P78344 907 aaKnown RBP eCLIP13.99□□□□□ -0.17
SCARB2-204ENST00000509994 ZNF827Q17R98 1081 aa13.99□□□□□ -0.17
SCARB2-204ENST00000509994 KLHL34Q8N239 644 aa13.99□□□□□ -0.17
SCARB2-204ENST00000509994 MTFR1LQ9H019 292 aa13.99□□□□□ -0.17
SCARB2-204ENST00000509994 TUBGCP6Q96RT7 1819 aa13.99□□□□□ -0.17
SCARB2-204ENST00000509994 LY75O60449 1722 aa13.98□□□□□ -0.17
SCARB2-204ENST00000509994 YY1P25490 414 aa13.98□□□□□ -0.17
SCARB2-204ENST00000509994 SLC27A3Q5K4L6 730 aa13.98□□□□□ -0.17
SCARB2-204ENST00000509994 LRRC4BQ9NT99 713 aa13.98□□□□□ -0.17
SCARB2-204ENST00000509994 TFCP2L1Q9NZI6 479 aa13.98□□□□□ -0.17
SCARB2-204ENST00000509994 KIF24Q5T7B8 1368 aa13.97□□□□□ -0.17
SCARB2-204ENST00000509994 CCNL1Q9UK58 526 aaPredicted RBP13.97□□□□□ -0.17
SCARB2-204ENST00000509994 QSER1Q2KHR3 1735 aa13.97□□□□□ -0.17
SCARB2-204ENST00000509994 HSPA5P11021 654 aaKnown RBP13.96□□□□□ -0.17
SCARB2-204ENST00000509994 ITGB4P16144 1822 aa13.95□□□□□ -0.18
SCARB2-204ENST00000509994 PTGER2P43116 358 aa13.95□□□□□ -0.18
SCARB2-204ENST00000509994 ARXQ96QS3 562 aa13.95□□□□□ -0.18
SCARB2-204ENST00000509994 FHDC1Q9C0D6 1143 aaPredicted RBP13.95□□□□□ -0.18
SCARB2-204ENST00000509994 PKD1L3Q7Z443 1732 aa13.95□□□□□ -0.18
SCARB2-204ENST00000509994 POLD1P28340 1107 aa13.94□□□□□ -0.18
SCARB2-204ENST00000509994 MPRIPQ6WCQ1 1025 aa13.94□□□□□ -0.18
SCARB2-204ENST00000509994 C5P01031 1676 aa13.94□□□□□ -0.18
SCARB2-204ENST00000509994 NSD2O96028 1365 aa13.94□□□□□ -0.18
SCARB2-204ENST00000509994 SPG7Q9UQ90 795 aa13.93□□□□□ -0.18
SCARB2-204ENST00000509994 TOGARAM1Q9Y4F4 1720 aa13.93□□□□□ -0.18
SCARB2-204ENST00000509994 AKT1S1Q96B36 256 aa13.92□□□□□ -0.18
SCARB2-204ENST00000509994 PELP1Q8IZL8 1130 aaKnown RBP13.91□□□□□ -0.18
SCARB2-204ENST00000509994 SYT17Q9BSW7 474 aa13.91□□□□□ -0.18
SCARB2-204ENST00000509994 PANK3Q9H999 370 aa13.91□□□□□ -0.18
SCARB2-204ENST00000509994 TAF1LQ8IZX4 1826 aa13.91□□□□□ -0.18
SCARB2-204ENST00000509994 PALLDQ8WX93 1383 aa13.91□□□□□ -0.18
SCARB2-204ENST00000509994 WASHC2AQ641Q2 1341 aa13.9□□□□□ -0.18
SCARB2-204ENST00000509994 PNPLA7Q6ZV29 1317 aa13.9□□□□□ -0.18
SCARB2-204ENST00000509994 CYP27B1O15528 508 aa13.9□□□□□ -0.18
SCARB2-204ENST00000509994 SLC16A10Q8TF71 515 aa13.9□□□□□ -0.18
SCARB2-204ENST00000509994 CHD4Q14839 1912 aa13.9□□□□□ -0.18
SCARB2-204ENST00000509994 EYA1Q99502 592 aa13.89□□□□□ -0.19
SCARB2-204ENST00000509994 POLKQ9UBT6 870 aa13.89□□□□□ -0.19
SCARB2-204ENST00000509994 HMGB2P26583 209 aaKnown RBP13.88□□□□□ -0.19
SCARB2-204ENST00000509994 GPR162Q16538 588 aa13.88□□□□□ -0.19
SCARB2-204ENST00000509994 MSL1Q68DK7 614 aa13.88□□□□□ -0.19
SCARB2-204ENST00000509994 MORC1Q86VD1 984 aa13.88□□□□□ -0.19
SCARB2-204ENST00000509994 SMARCC1Q92922 1105 aaPredicted RBP13.88□□□□□ -0.19
SCARB2-204ENST00000509994 AK7Q96M32 723 aa13.88□□□□□ -0.19
SCARB2-204ENST00000509994 SGIP1Q9BQI5 828 aa13.88□□□□□ -0.19
SCARB2-204ENST00000509994 EIF4A2Q14240 407 aaKnown RBP13.87□□□□□ -0.19
SCARB2-204ENST00000509994 TMOD3Q9NYL9 352 aa13.87□□□□□ -0.19
SCARB2-204ENST00000509994 KNSTRNQ9Y448 316 aa13.87□□□□□ -0.19
SCARB2-204ENST00000509994 C4BP0C0L5 1744 aa13.87□□□□□ -0.19
SCARB2-204ENST00000509994 NCAPD2Q15021 1401 aa13.85□□□□□ -0.19
SCARB2-204ENST00000509994 PHF14O94880 888 aa13.85□□□□□ -0.19
SCARB2-204ENST00000509994 IFNL2Q8IZJ0 200 aa13.85□□□□□ -0.19
SCARB2-204ENST00000509994 COL23A1Q86Y22 540 aaPredicted RBP13.84□□□□□ -0.19
SCARB2-204ENST00000509994 PIGBQ92521 554 aa13.84□□□□□ -0.19
SCARB2-204ENST00000509994 COL24A1Q17RW2 1714 aa13.84□□□□□ -0.19
SCARB2-204ENST00000509994 PHKG2P15735 406 aa13.83□□□□□ -0.2
SCARB2-204ENST00000509994 FLAD1Q8NFF5 587 aa13.83□□□□□ -0.2
SCARB2-204ENST00000509994 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.83□□□□□ -0.2
SCARB2-204ENST00000509994 MAP3K5Q99683 1374 aa13.83□□□□□ -0.2
SCARB2-204ENST00000509994 UBR3Q6ZT12 1888 aa13.82□□□□□ -0.2
SCARB2-204ENST00000509994 CNGB1Q14028 1251 aaPredicted RBP13.82□□□□□ -0.2
SCARB2-204ENST00000509994 ZNF530Q6P9A1 599 aaPredicted RBP13.82□□□□□ -0.2
SCARB2-204ENST00000509994 LOC102724428A0A0B4J2F2 783 aa13.81□□□□□ -0.2
SCARB2-204ENST00000509994 SIK1P57059 783 aa13.81□□□□□ -0.2
SCARB2-204ENST00000509994 NKX1-1Q15270 411 aaPredicted RBP13.81□□□□□ -0.2
SCARB2-204ENST00000509994 PLEKHO1Q53GL0 409 aaPredicted RBP13.81□□□□□ -0.2
SCARB2-204ENST00000509994 C1orf141Q5JVX7 400 aa13.81□□□□□ -0.2
SCARB2-204ENST00000509994 ASAP1Q9ULH1 1129 aa13.81□□□□□ -0.2
SCARB2-204ENST00000509994 IGSF1Q8N6C5 1336 aa13.81□□□□□ -0.2
SCARB2-204ENST00000509994 HSP90AB1P08238 724 aaKnown RBP13.8□□□□□ -0.2
SCARB2-204ENST00000509994 ATP6V1AP38606 617 aa13.8□□□□□ -0.2
SCARB2-204ENST00000509994 NLGN2Q8NFZ4 835 aa13.8□□□□□ -0.2
SCARB2-204ENST00000509994 RBM42Q9BTD8 480 aaKnown RBP13.8□□□□□ -0.2
SCARB2-204ENST00000509994 GNPATO15228 680 aa13.79□□□□□ -0.2
SCARB2-204ENST00000509994 KIF7Q2M1P5 1343 aa13.79□□□□□ -0.2
SCARB2-204ENST00000509994 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms