RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 OSBPL3Q9H4L5 887 aa13.46□□□□□ -0.25
TRAPPC11-206ENST00000509857 MYCP01106 439 aaPredicted RBP13.45□□□□□ -0.26
TRAPPC11-206ENST00000509857 NCOA4Q13772 614 aa13.45□□□□□ -0.26
TRAPPC11-206ENST00000509857 SERPINA10Q9UK55 444 aa13.45□□□□□ -0.26
TRAPPC11-206ENST00000509857 EML3Q32P44 896 aa13.44□□□□□ -0.26
TRAPPC11-206ENST00000509857 CFAP70Q5T0N1 1121 aa13.44□□□□□ -0.26
TRAPPC11-206ENST00000509857 KDF1Q8NAX2 398 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC11-206ENST00000509857 TRIM46Q7Z4K8 759 aa13.43□□□□□ -0.26
TRAPPC11-206ENST00000509857 CCDC97Q96F63 343 aaPredicted RBP13.43□□□□□ -0.26
TRAPPC11-206ENST00000509857 ATP13A2Q9NQ11 1180 aa13.43□□□□□ -0.26
TRAPPC11-206ENST00000509857 MRPL14Q6P1L8 145 aaKnown RBP13.42□□□□□ -0.26
TRAPPC11-206ENST00000509857 CYP2U1Q7Z449 544 aa13.42□□□□□ -0.26
TRAPPC11-206ENST00000509857 DEPDC4Q8N2C3 294 aa13.42□□□□□ -0.26
TRAPPC11-206ENST00000509857 TSEN34Q9BSV6 310 aaKnown RBP13.42□□□□□ -0.26
TRAPPC11-206ENST00000509857 DACH1Q9UI36 760 aa13.42□□□□□ -0.26
TRAPPC11-206ENST00000509857 SUPT5HO00267 1087 aaKnown RBP13.41□□□□□ -0.26
TRAPPC11-206ENST00000509857 BMP1P13497 986 aa13.41□□□□□ -0.26
TRAPPC11-206ENST00000509857 LINC00528Q8N1L1 170 aa13.41□□□□□ -0.26
TRAPPC11-206ENST00000509857 CCDC82Q8N4S0 544 aa13.41□□□□□ -0.26
TRAPPC11-206ENST00000509857 ESF1Q9H501 851 aaKnown RBP13.4□□□□□ -0.26
TRAPPC11-206ENST00000509857 NOD1Q9Y239 953 aa13.4□□□□□ -0.26
TRAPPC11-206ENST00000509857 ATP5J2-PTCD1G3V325 749 aa13.39□□□□□ -0.27
TRAPPC11-206ENST00000509857 PTGIRP43119 386 aa13.39□□□□□ -0.27
TRAPPC11-206ENST00000509857 AGBL1Q96MI9 1066 aa13.39□□□□□ -0.27
TRAPPC11-206ENST00000509857 LMOD1P29536 600 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC11-206ENST00000509857 SPINT1O43278 529 aa13.37□□□□□ -0.27
TRAPPC11-206ENST00000509857 UPP2O95045 317 aa13.37□□□□□ -0.27
TRAPPC11-206ENST00000509857 GNRH1P01148 92 aa13.37□□□□□ -0.27
TRAPPC11-206ENST00000509857 SCARF1Q14162 830 aa13.37□□□□□ -0.27
TRAPPC11-206ENST00000509857 PCDHGA11Q9Y5H2 935 aa13.37□□□□□ -0.27
TRAPPC11-206ENST00000509857 KANK4Q5T7N3 995 aaPredicted RBP13.36□□□□□ -0.27
TRAPPC11-206ENST00000509857 TRIM50Q86XT4 487 aa13.36□□□□□ -0.27
TRAPPC11-206ENST00000509857 GTF2IP78347 998 aa13.35□□□□□ -0.27
TRAPPC11-206ENST00000509857 RELBQ01201 579 aa13.35□□□□□ -0.27
TRAPPC11-206ENST00000509857 MKRN1Q9UHC7 482 aaKnown RBP13.35□□□□□ -0.27
TRAPPC11-206ENST00000509857 PURBQ96QR8 312 aaKnown RBP13.34□□□□□ -0.27
TRAPPC11-206ENST00000509857 BMP2P12643 396 aa13.33□□□□□ -0.28
TRAPPC11-206ENST00000509857 ZFP42Q96MM3 310 aa13.33□□□□□ -0.28
TRAPPC11-206ENST00000509857 ATP1A2P50993 1020 aa13.32□□□□□ -0.28
TRAPPC11-206ENST00000509857 SRPK2P78362 688 aaKnown RBP13.32□□□□□ -0.28
TRAPPC11-206ENST00000509857 CLN3Q13286 438 aa13.32□□□□□ -0.28
TRAPPC11-206ENST00000509857 C6orf118Q5T5N4 469 aa13.32□□□□□ -0.28
TRAPPC11-206ENST00000509857 SENP2Q9HC62 589 aa13.32□□□□□ -0.28
TRAPPC11-206ENST00000509857 A0A1W2PRU2 124 aa13.31□□□□□ -0.28
TRAPPC11-206ENST00000509857 WASLO00401 505 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC11-206ENST00000509857 SCNN1DP51172 638 aa13.31□□□□□ -0.28
TRAPPC11-206ENST00000509857 CLDN10P78369 228 aa13.31□□□□□ -0.28
TRAPPC11-206ENST00000509857 ARHGEF10LQ9HCE6 1279 aa13.31□□□□□ -0.28
TRAPPC11-206ENST00000509857 GMPR2Q9P2T1 348 aaKnown RBP13.31□□□□□ -0.28
TRAPPC11-206ENST00000509857 KIFC2Q96AC6 838 aa13.3□□□□□ -0.28
TRAPPC11-206ENST00000509857 TRIM47Q96LD4 638 aa13.3□□□□□ -0.28
TRAPPC11-206ENST00000509857 ZNF395Q9H8N7 513 aaPredicted RBP13.3□□□□□ -0.28
TRAPPC11-206ENST00000509857 VRTNQ9H8Y1 702 aa13.3□□□□□ -0.28
TRAPPC11-206ENST00000509857 ZBTB7BO15156 539 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC11-206ENST00000509857 ESCO1Q5FWF5 840 aa13.29□□□□□ -0.28
TRAPPC11-206ENST00000509857 LARGE2Q8N3Y3 721 aa13.29□□□□□ -0.28
TRAPPC11-206ENST00000509857 OGFOD1Q8N543 542 aa13.29□□□□□ -0.28
TRAPPC11-206ENST00000509857 ETNK1Q9HBU6 452 aa13.29□□□□□ -0.28
TRAPPC11-206ENST00000509857 DNAAF2Q9NVR5 837 aaKnown RBP13.29□□□□□ -0.28
TRAPPC11-206ENST00000509857 HRH3Q9Y5N1 445 aa13.29□□□□□ -0.28
TRAPPC11-206ENST00000509857 IL2RAP01589 272 aa13.28□□□□□ -0.28
TRAPPC11-206ENST00000509857 RFX1P22670 979 aa13.28□□□□□ -0.28
TRAPPC11-206ENST00000509857 SIX5Q8N196 739 aa13.28□□□□□ -0.28
TRAPPC11-206ENST00000509857 XAGE2Q96GT9 111 aa13.28□□□□□ -0.28
TRAPPC11-206ENST00000509857 INSM2Q96T92 566 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC11-206ENST00000509857 KIAA1024Q9UPX6 916 aa13.28□□□□□ -0.28
TRAPPC11-206ENST00000509857 SOS2Q07890 1332 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC11-206ENST00000509857 FAM196BA6NMK8 535 aa13.27□□□□□ -0.29
TRAPPC11-206ENST00000509857 GPC1P35052 558 aa13.27□□□□□ -0.29
TRAPPC11-206ENST00000509857 GDF10P55107 478 aa13.27□□□□□ -0.29
TRAPPC11-206ENST00000509857 PBXIP1Q96AQ6 731 aa13.27□□□□□ -0.29
TRAPPC11-206ENST00000509857 ESYT1Q9BSJ8 1104 aa13.27□□□□□ -0.29
TRAPPC11-206ENST00000509857 RAB6BQ9NRW1 208 aa13.27□□□□□ -0.29
TRAPPC11-206ENST00000509857 TMEM229AB2RXF0 380 aa13.26□□□□□ -0.29
TRAPPC11-206ENST00000509857 DKK1O94907 266 aa13.26□□□□□ -0.29
TRAPPC11-206ENST00000509857 CRTC2Q53ET0 693 aaPredicted RBP13.26□□□□□ -0.29
TRAPPC11-206ENST00000509857 STAU1O95793 577 aaKnown RBP13.25□□□□□ -0.29
TRAPPC11-206ENST00000509857 INHAP05111 366 aa13.25□□□□□ -0.29
TRAPPC11-206ENST00000509857 RASA1P20936 1047 aa13.25□□□□□ -0.29
TRAPPC11-206ENST00000509857 CTSOP43234 321 aaPredicted RBP13.25□□□□□ -0.29
TRAPPC11-206ENST00000509857 RNF144AP50876 292 aaPredicted RBP13.25□□□□□ -0.29
TRAPPC11-206ENST00000509857 PSME1Q06323 249 aa13.25□□□□□ -0.29
TRAPPC11-206ENST00000509857 PTK7Q13308 1070 aa13.25□□□□□ -0.29
TRAPPC11-206ENST00000509857 FOXD4L5Q5VV16 416 aaPredicted RBP13.25□□□□□ -0.29
TRAPPC11-206ENST00000509857 CNKSR1Q969H4 720 aa13.25□□□□□ -0.29
TRAPPC11-206ENST00000509857 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.24□□□□□ -0.29
TRAPPC11-206ENST00000509857 TTLL8A6PVC2 850 aa13.24□□□□□ -0.29
TRAPPC11-206ENST00000509857 MEN1O00255 615 aa13.24□□□□□ -0.29
TRAPPC11-206ENST00000509857 LARP1Q6PKG0 1096 aaKnown RBP13.24□□□□□ -0.29
TRAPPC11-206ENST00000509857 POTECB2RU33 542 aa13.23□□□□□ -0.29
TRAPPC11-206ENST00000509857 USP17L15C9J2P7 530 aa13.23□□□□□ -0.29
TRAPPC11-206ENST00000509857 USP17L10C9JJH3 530 aa13.23□□□□□ -0.29
TRAPPC11-206ENST00000509857 USP17L13C9JLJ4 530 aa13.23□□□□□ -0.29
TRAPPC11-206ENST00000509857 USP17L12C9JPN9 530 aa13.23□□□□□ -0.29
TRAPPC11-206ENST00000509857 USP17L11C9JVI0 530 aa13.23□□□□□ -0.29
TRAPPC11-206ENST00000509857 USP17L21D6R901 530 aa13.23□□□□□ -0.29
TRAPPC11-206ENST00000509857 USP17L18D6R9N7 530 aa13.23□□□□□ -0.29
TRAPPC11-206ENST00000509857 USP17L22D6RA61 530 aa13.23□□□□□ -0.29
TRAPPC11-206ENST00000509857 USP17L17D6RBQ6 530 aa13.23□□□□□ -0.29
TRAPPC11-206ENST00000509857 USP17L19D6RCP7 530 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms