RNA–Protein interactions for RNA: ENST00000509841.1

TNIP3-204, Transcript of TNFAIP3 interacting protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TNIP3, Length 1,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP3-204ENST00000509841 PLIN1O60240 522 aa13.78□□□□□ -0.2
TNIP3-204ENST00000509841 AMOTQ4VCS5 1084 aa13.78□□□□□ -0.2
TNIP3-204ENST00000509841 EXOC6Q8TAG9 804 aa13.78□□□□□ -0.2
TNIP3-204ENST00000509841 ANKRD24Q8TF21 1146 aa13.78□□□□□ -0.2
TNIP3-204ENST00000509841 BABAM1Q9NWV8 329 aa13.78□□□□□ -0.2
TNIP3-204ENST00000509841 LAS1LQ9Y4W2 734 aaKnown RBP13.78□□□□□ -0.2
TNIP3-204ENST00000509841 MAP3K5Q99683 1374 aa13.77□□□□□ -0.2
TNIP3-204ENST00000509841 IPO8O15397 1037 aaKnown RBP13.77□□□□□ -0.21
TNIP3-204ENST00000509841 BCAR3O75815 825 aa13.77□□□□□ -0.21
TNIP3-204ENST00000509841 MTHFSDQ2M296 383 aaKnown RBP13.77□□□□□ -0.21
TNIP3-204ENST00000509841 BRPF1P55201 1214 aaPredicted RBP13.76□□□□□ -0.21
TNIP3-204ENST00000509841 PLEKHO1Q53GL0 409 aaPredicted RBP13.76□□□□□ -0.21
TNIP3-204ENST00000509841 CRBNQ96SW2 442 aa13.76□□□□□ -0.21
TNIP3-204ENST00000509841 SMC4Q9NTJ3 1288 aa13.76□□□□□ -0.21
TNIP3-204ENST00000509841 KIAA0232Q92628 1395 aa13.76□□□□□ -0.21
TNIP3-204ENST00000509841 LRRC37A3O60309 1634 aa13.76□□□□□ -0.21
TNIP3-204ENST00000509841 ERBB3P21860 1342 aa13.76□□□□□ -0.21
TNIP3-204ENST00000509841 NBPF6Q5VWK0 638 aa13.75□□□□□ -0.21
TNIP3-204ENST00000509841 ZKSCAN2Q63HK3 967 aa13.75□□□□□ -0.21
TNIP3-204ENST00000509841 B4GALNT3Q6L9W6 998 aa13.75□□□□□ -0.21
TNIP3-204ENST00000509841 DDX17Q92841 729 aaKnown RBP13.75□□□□□ -0.21
TNIP3-204ENST00000509841 NBPF4Q96M43 638 aa13.75□□□□□ -0.21
TNIP3-204ENST00000509841 MBIPQ9NS73 344 aa13.75□□□□□ -0.21
TNIP3-204ENST00000509841 COL18A1P39060 1754 aa13.75□□□□□ -0.21
TNIP3-204ENST00000509841 LTBP4Q8N2S1 1624 aa13.75□□□□□ -0.21
TNIP3-204ENST00000509841 SOS1Q07889 1333 aaPredicted RBP13.75□□□□□ -0.21
TNIP3-204ENST00000509841 LMO7Q8WWI1 1683 aa13.75□□□□□ -0.21
TNIP3-204ENST00000509841 CHL1O00533 1208 aa13.75□□□□□ -0.21
TNIP3-204ENST00000509841 ATXN8OSP0DMR3 200 aa13.75□□□□□ -0.21
TNIP3-204ENST00000509841 ZC3H6P61129 1189 aaKnown RBP13.75□□□□□ -0.21
TNIP3-204ENST00000509841 CRB1P82279 1406 aa13.74□□□□□ -0.21
TNIP3-204ENST00000509841 FRAT1Q92837 279 aaPredicted RBP13.74□□□□□ -0.21
TNIP3-204ENST00000509841 THUMPD2Q9BTF0 503 aaKnown RBP13.74□□□□□ -0.21
TNIP3-204ENST00000509841 CHMP4AQ9BY43 222 aa13.74□□□□□ -0.21
TNIP3-204ENST00000509841 RGPD2P0DJD1 1756 aa13.73□□□□□ -0.21
TNIP3-204ENST00000509841 RGPD5Q99666 1765 aa13.73□□□□□ -0.21
TNIP3-204ENST00000509841 OVOS2A0A0G2JMS6 1433 aa13.73□□□□□ -0.21
TNIP3-204ENST00000509841 AHDC1Q5TGY3 1603 aaPredicted RBP13.73□□□□□ -0.21
TNIP3-204ENST00000509841 FAM83GA6ND36 823 aa13.73□□□□□ -0.21
TNIP3-204ENST00000509841 TWISTNBQ3B726 338 aaPredicted RBP13.72□□□□□ -0.21
TNIP3-204ENST00000509841 MCM10Q7L590 875 aa13.72□□□□□ -0.21
TNIP3-204ENST00000509841 FTSJ3Q8IY81 847 aaKnown RBP13.72□□□□□ -0.21
TNIP3-204ENST00000509841 CHMP4BQ9H444 224 aaKnown RBP13.72□□□□□ -0.21
TNIP3-204ENST00000509841 ABCA3Q99758 1704 aa13.72□□□□□ -0.21
TNIP3-204ENST00000509841 DCTN1Q14203 1278 aa13.71□□□□□ -0.21
TNIP3-204ENST00000509841 AKAP4Q5JQC9 854 aa13.71□□□□□ -0.21
TNIP3-204ENST00000509841 C1orf141Q5JVX7 400 aa13.71□□□□□ -0.21
TNIP3-204ENST00000509841 SSH1Q8WYL5 1049 aa13.71□□□□□ -0.21
TNIP3-204ENST00000509841 RAPGEF4Q8WZA2 1011 aa13.71□□□□□ -0.21
TNIP3-204ENST00000509841 ARHGAP45Q92619 1136 aa13.71□□□□□ -0.21
TNIP3-204ENST00000509841 PRDM11Q9NQV5 511 aa13.71□□□□□ -0.21
TNIP3-204ENST00000509841 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.71□□□□□ -0.21
TNIP3-204ENST00000509841 VAMP4O75379 141 aa13.71□□□□□ -0.22
TNIP3-204ENST00000509841 PLEKHG5O94827 1062 aa13.71□□□□□ -0.22
TNIP3-204ENST00000509841 CSB-PGBD3P0DP91 1061 aa13.71□□□□□ -0.22
TNIP3-204ENST00000509841 C20orf194Q5TEA3 1177 aa13.71□□□□□ -0.22
TNIP3-204ENST00000509841 USHBP1Q8N6Y0 703 aa13.71□□□□□ -0.22
TNIP3-204ENST00000509841 LRRC59Q96AG4 307 aaKnown RBP13.71□□□□□ -0.22
TNIP3-204ENST00000509841 TSPYL4Q9UJ04 414 aa13.71□□□□□ -0.22
TNIP3-204ENST00000509841 ROBO1Q9Y6N7 1651 aa13.7□□□□□ -0.22
TNIP3-204ENST00000509841 ATF7IPQ6VMQ6 1270 aa13.7□□□□□ -0.22
TNIP3-204ENST00000509841 DZIP1LQ8IYY4 767 aaKnown RBP13.7□□□□□ -0.22
TNIP3-204ENST00000509841 AXIN2Q9Y2T1 843 aa13.7□□□□□ -0.22
TNIP3-204ENST00000509841 CEMIPQ8WUJ3 1361 aa13.69□□□□□ -0.22
TNIP3-204ENST00000509841 TATP17735 454 aaPredicted RBP13.69□□□□□ -0.22
TNIP3-204ENST00000509841 TAF7Q15545 349 aaPredicted RBP13.69□□□□□ -0.22
TNIP3-204ENST00000509841 ZNF530Q6P9A1 599 aaPredicted RBP13.69□□□□□ -0.22
TNIP3-204ENST00000509841 CABLES1Q8TDN4 633 aa13.69□□□□□ -0.22
TNIP3-204ENST00000509841 BCL2L13Q9BXK5 485 aa13.69□□□□□ -0.22
TNIP3-204ENST00000509841 NLRP2Q9NX02 1062 aa13.69□□□□□ -0.22
TNIP3-204ENST00000509841 SPG7Q9UQ90 795 aa13.68□□□□□ -0.22
TNIP3-204ENST00000509841 CENPQQ7L2Z9 268 aaPredicted RBP13.67□□□□□ -0.22
TNIP3-204ENST00000509841 API5Q9BZZ5 524 aaKnown RBP13.67□□□□□ -0.22
TNIP3-204ENST00000509841 DDX19BQ9UMR2 479 aa13.67□□□□□ -0.22
TNIP3-204ENST00000509841 COL22A1Q8NFW1 1626 aaPredicted RBP13.67□□□□□ -0.22
TNIP3-204ENST00000509841 TOM1O60784 492 aa13.66□□□□□ -0.22
TNIP3-204ENST00000509841 TEFQ10587 303 aa13.66□□□□□ -0.22
TNIP3-204ENST00000509841 MVPQ14764 893 aaKnown RBP13.66□□□□□ -0.22
TNIP3-204ENST00000509841 CLUAP1Q96AJ1 413 aa13.66□□□□□ -0.22
TNIP3-204ENST00000509841 WDR17Q8IZU2 1322 aa13.66□□□□□ -0.22
TNIP3-204ENST00000509841 PARP4Q9UKK3 1724 aaKnown RBP13.66□□□□□ -0.22
TNIP3-204ENST00000509841 HSP90AB1P08238 724 aaKnown RBP13.66□□□□□ -0.22
TNIP3-204ENST00000509841 TRIM27P14373 513 aa13.66□□□□□ -0.22
TNIP3-204ENST00000509841 MRPL50Q8N5N7 158 aaKnown RBP13.66□□□□□ -0.22
TNIP3-204ENST00000509841 C8orf58Q8NAV2 365 aa13.66□□□□□ -0.22
TNIP3-204ENST00000509841 PANK1Q8TE04 598 aa13.66□□□□□ -0.22
TNIP3-204ENST00000509841 NOB1Q9ULX3 412 aaKnown RBP13.66□□□□□ -0.22
TNIP3-204ENST00000509841 CACNA1FO60840 1977 aa13.65□□□□□ -0.22
TNIP3-204ENST00000509841 CHRNA2Q15822 529 aa13.65□□□□□ -0.22
TNIP3-204ENST00000509841 IL17REQ8NFR9 667 aa13.65□□□□□ -0.22
TNIP3-204ENST00000509841 COG6Q9Y2V7 657 aa13.65□□□□□ -0.22
TNIP3-204ENST00000509841 COL5A2P05997 1499 aaPredicted RBP13.65□□□□□ -0.23
TNIP3-204ENST00000509841 ADAMTS7Q9UKP4 1686 aa13.64□□□□□ -0.23
TNIP3-204ENST00000509841 PKD1L3Q7Z443 1732 aa13.64□□□□□ -0.23
TNIP3-204ENST00000509841 HOXB7P09629 217 aa13.64□□□□□ -0.23
TNIP3-204ENST00000509841 TSPYL6Q8N831 410 aa13.64□□□□□ -0.23
TNIP3-204ENST00000509841 PTPRCP08575 1304 aa13.64□□□□□ -0.23
TNIP3-204ENST00000509841 COL14A1Q05707 1796 aaKnown RBP13.64□□□□□ -0.23
TNIP3-204ENST00000509841 VIRMAQ69YN4 1812 aaKnown RBP13.63□□□□□ -0.23
TNIP3-204ENST00000509841 ELL2O00472 640 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms