RNA–Protein interactions for RNA: ENST00000509751.1

HTT-207, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 723 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-207ENST00000509751 PTF1AQ7RTS3 328 aa20.43■□□□□ 0.86
HTT-207ENST00000509751 TNS1Q9HBL0 1735 aaKnown RBP20.42■□□□□ 0.86
HTT-207ENST00000509751 APBA3O96018 575 aa20.42■□□□□ 0.86
HTT-207ENST00000509751 EN1Q05925 392 aaPredicted RBP20.42■□□□□ 0.86
HTT-207ENST00000509751 AEBP1Q8IUX7 1158 aa20.42■□□□□ 0.86
HTT-207ENST00000509751 ZNF316A6NFI3 1004 aaPredicted RBP20.4■□□□□ 0.86
HTT-207ENST00000509751 DIAPH1O60610 1272 aaKnown RBP20.4■□□□□ 0.86
HTT-207ENST00000509751 SHANK3Q9BYB0 1731 aa20.39■□□□□ 0.86
HTT-207ENST00000509751 KCNQ2O43526 872 aa20.39■□□□□ 0.85
HTT-207ENST00000509751 SULT6B1Q6IMI4 303 aa20.39■□□□□ 0.85
HTT-207ENST00000509751 COL3A1P02461 1466 aaPredicted RBP20.38■□□□□ 0.85
HTT-207ENST00000509751 BCL9O00512 1426 aa20.38■□□□□ 0.85
HTT-207ENST00000509751 PARD3Q8TEW0 1356 aa20.38■□□□□ 0.85
HTT-207ENST00000509751 PCDH11XQ9BZA7 1347 aa20.38■□□□□ 0.85
HTT-207ENST00000509751 PCDH11YQ9BZA8 1340 aa20.38■□□□□ 0.85
HTT-207ENST00000509751 SBF2Q86WG5 1849 aa20.37■□□□□ 0.85
HTT-207ENST00000509751 U2SURPO15042 1029 aaKnown RBP20.37■□□□□ 0.85
HTT-207ENST00000509751 HMOX1P09601 288 aa20.37■□□□□ 0.85
HTT-207ENST00000509751 CFAP53Q96M91 514 aa20.37■□□□□ 0.85
HTT-207ENST00000509751 BCL11BQ9C0K0 894 aaPredicted RBP20.37■□□□□ 0.85
HTT-207ENST00000509751 SPG7Q9UQ90 795 aa20.37■□□□□ 0.85
HTT-207ENST00000509751 CYP27B1O15528 508 aa20.36■□□□□ 0.85
HTT-207ENST00000509751 EZH2Q15910 746 aaKnown RBP20.36■□□□□ 0.85
HTT-207ENST00000509751 SYTL4Q96C24 671 aaPredicted RBP20.36■□□□□ 0.85
HTT-207ENST00000509751 PKD1L3Q7Z443 1732 aa20.35■□□□□ 0.85
HTT-207ENST00000509751 KAT6BQ8WYB5 2073 aa20.34■□□□□ 0.85
HTT-207ENST00000509751 NHSQ6T4R5 1651 aa20.33■□□□□ 0.85
HTT-207ENST00000509751 CAMKK2Q96RR4 588 aa20.33■□□□□ 0.85
HTT-207ENST00000509751 PRIM1P49642 420 aaKnown RBP20.32■□□□□ 0.84
HTT-207ENST00000509751 DOT1LQ8TEK3 1739 aa20.32■□□□□ 0.84
HTT-207ENST00000509751 KDRP35968 1356 aa20.32■□□□□ 0.84
HTT-207ENST00000509751 RALBP1Q15311 655 aa20.31■□□□□ 0.84
HTT-207ENST00000509751 PLEKHO1Q53GL0 409 aaPredicted RBP20.31■□□□□ 0.84
HTT-207ENST00000509751 ZNF530Q6P9A1 599 aaPredicted RBP20.31■□□□□ 0.84
HTT-207ENST00000509751 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.31■□□□□ 0.84
HTT-207ENST00000509751 PHKG2P15735 406 aa20.29■□□□□ 0.84
HTT-207ENST00000509751 IFNL2Q8IZJ0 200 aa20.29■□□□□ 0.84
HTT-207ENST00000509751 NUDCQ9Y266 331 aa20.28■□□□□ 0.84
HTT-207ENST00000509751 U2AF1L5P0DN76 240 aaPredicted RBP20.27■□□□□ 0.84
HTT-207ENST00000509751 U2AF1Q01081 240 aaKnown RBP eCLIP20.27■□□□□ 0.84
HTT-207ENST00000509751 AMOTQ4VCS5 1084 aa20.27■□□□□ 0.84
HTT-207ENST00000509751 BTAF1O14981 1849 aa20.27■□□□□ 0.84
HTT-207ENST00000509751 PLSCR1O15162 318 aa20.26■□□□□ 0.83
HTT-207ENST00000509751 MYBBP1AQ9BQG0 1328 aaKnown RBP20.26■□□□□ 0.83
HTT-207ENST00000509751 TOGARAM1Q9Y4F4 1720 aa20.25■□□□□ 0.83
HTT-207ENST00000509751 PLEKHG2Q9H7P9 1386 aa20.25■□□□□ 0.83
HTT-207ENST00000509751 C1orf141Q5JVX7 400 aa20.25■□□□□ 0.83
HTT-207ENST00000509751 MPRIPQ6WCQ1 1025 aa20.25■□□□□ 0.83
HTT-207ENST00000509751 NKX1-1Q15270 411 aaPredicted RBP20.24■□□□□ 0.83
HTT-207ENST00000509751 PRKRIP1Q9H875 184 aaPredicted RBP20.24■□□□□ 0.83
HTT-207ENST00000509751 PSDA5PKW4 1024 aaPredicted RBP20.23■□□□□ 0.83
HTT-207ENST00000509751 PRKAR2BP31323 418 aa20.23■□□□□ 0.83
HTT-207ENST00000509751 TXNRD1Q16881 649 aa20.23■□□□□ 0.83
HTT-207ENST00000509751 RREB1Q92766 1687 aa20.22■□□□□ 0.83
HTT-207ENST00000509751 PROM2Q8N271 834 aa20.22■□□□□ 0.83
HTT-207ENST00000509751 NUP188Q5SRE5 1749 aa20.22■□□□□ 0.83
HTT-207ENST00000509751 MTHFSDQ2M296 383 aaKnown RBP20.21■□□□□ 0.83
HTT-207ENST00000509751 RSPH6AQ9H0K4 717 aa20.21■□□□□ 0.83
HTT-207ENST00000509751 RGPD3A6NKT7 1758 aaPredicted RBP20.21■□□□□ 0.83
HTT-207ENST00000509751 RGPD4Q7Z3J3 1758 aa20.21■□□□□ 0.83
HTT-207ENST00000509751 KDM6AO15550 1401 aaPredicted RBP20.2■□□□□ 0.82
HTT-207ENST00000509751 HSP90AB1P08238 724 aaKnown RBP20.2■□□□□ 0.82
HTT-207ENST00000509751 PIGBQ92521 554 aa20.2■□□□□ 0.82
HTT-207ENST00000509751 DCAF5Q96JK2 942 aa20.2■□□□□ 0.82
HTT-207ENST00000509751 TMOD3Q9NYL9 352 aa20.2■□□□□ 0.82
HTT-207ENST00000509751 KCNQ4P56696 695 aa20.19■□□□□ 0.82
HTT-207ENST00000509751 R3HDM1Q15032 1099 aaKnown RBP20.19■□□□□ 0.82
HTT-207ENST00000509751 AKAP4Q5JQC9 854 aa20.18■□□□□ 0.82
HTT-207ENST00000509751 PHACTR3Q96KR7 559 aa20.18■□□□□ 0.82
HTT-207ENST00000509751 NBPF14Q5TI25 921 aa20.17■□□□□ 0.82
HTT-207ENST00000509751 ANO8Q9HCE9 1232 aaPredicted RBP20.17■□□□□ 0.82
HTT-207ENST00000509751 ITGB4P16144 1822 aa20.17■□□□□ 0.82
HTT-207ENST00000509751 CABP4P57796 275 aa20.16■□□□□ 0.82
HTT-207ENST00000509751 PALLDQ8WX93 1383 aa20.16■□□□□ 0.82
HTT-207ENST00000509751 FCHSD2O94868 740 aa20.15■□□□□ 0.82
HTT-207ENST00000509751 LGR6Q9HBX8 967 aa20.15■□□□□ 0.82
HTT-207ENST00000509751 LRRC4BQ9NT99 713 aa20.15■□□□□ 0.82
HTT-207ENST00000509751 CCNL1Q9UK58 526 aaPredicted RBP20.15■□□□□ 0.82
HTT-207ENST00000509751 ERVV-2B6SEH9 535 aa20.14■□□□□ 0.81
HTT-207ENST00000509751 GAS2L2Q8NHY3 880 aa20.14■□□□□ 0.81
HTT-207ENST00000509751 ASAP1Q9ULH1 1129 aa20.14■□□□□ 0.81
HTT-207ENST00000509751 MAP3K5Q99683 1374 aa20.13■□□□□ 0.81
HTT-207ENST00000509751 RNMTO43148 476 aaKnown RBP20.12■□□□□ 0.81
HTT-207ENST00000509751 ANP32CO43423 234 aa20.12■□□□□ 0.81
HTT-207ENST00000509751 SMARCC1Q92922 1105 aaPredicted RBP20.12■□□□□ 0.81
HTT-207ENST00000509751 STK32BQ9NY57 414 aa20.12■□□□□ 0.81
HTT-207ENST00000509751 SLC27A3Q5K4L6 730 aa20.11■□□□□ 0.81
HTT-207ENST00000509751 NFATC2IPQ8NCF5 419 aa20.11■□□□□ 0.81
HTT-207ENST00000509751 GNAT3A8MTJ3 354 aa20.1■□□□□ 0.81
HTT-207ENST00000509751 NEFMP07197 916 aa20.1■□□□□ 0.81
HTT-207ENST00000509751 WDR43Q15061 677 aaKnown RBP eCLIP20.1■□□□□ 0.81
HTT-207ENST00000509751 ATG3Q9NT62 314 aa20.1■□□□□ 0.81
HTT-207ENST00000509751 LY75O60449 1722 aa20.1■□□□□ 0.81
HTT-207ENST00000509751 SCN11AQ9UI33 1791 aa20.09■□□□□ 0.81
HTT-207ENST00000509751 ZNF827Q17R98 1081 aa20.09■□□□□ 0.81
HTT-207ENST00000509751 RBM42Q9BTD8 480 aaKnown RBP20.08■□□□□ 0.81
HTT-207ENST00000509751 SLC52A2Q9HAB3 445 aa20.08■□□□□ 0.81
HTT-207ENST00000509751 PAPPAQ13219 1627 aa20.08■□□□□ 0.8
HTT-207ENST00000509751 MAPK8IP3Q9UPT6 1336 aa20.07■□□□□ 0.8
HTT-207ENST00000509751 SLC15A2Q16348 729 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms