RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 PLSCR1O15162 318 aa11.93□□□□□ -0.5
PDLIM5-213ENST00000509357 KCNQ2O43526 872 aa11.93□□□□□ -0.5
PDLIM5-213ENST00000509357 CNGB1Q14028 1251 aaPredicted RBP11.93□□□□□ -0.5
PDLIM5-213ENST00000509357 ZCRB1Q8TBF4 217 aaKnown RBP11.93□□□□□ -0.5
PDLIM5-213ENST00000509357 INSRP06213 1382 aa11.92□□□□□ -0.5
PDLIM5-213ENST00000509357 TATP17735 454 aaPredicted RBP11.92□□□□□ -0.5
PDLIM5-213ENST00000509357 MORC1Q86VD1 984 aa11.92□□□□□ -0.5
PDLIM5-213ENST00000509357 SYTL4Q96C24 671 aaPredicted RBP11.92□□□□□ -0.5
PDLIM5-213ENST00000509357 KIF24Q5T7B8 1368 aa11.92□□□□□ -0.5
PDLIM5-213ENST00000509357 TNS1Q9HBL0 1735 aaKnown RBP11.91□□□□□ -0.5
PDLIM5-213ENST00000509357 BCL9O00512 1426 aa11.91□□□□□ -0.5
PDLIM5-213ENST00000509357 TXNRD1Q16881 649 aa11.9□□□□□ -0.5
PDLIM5-213ENST00000509357 NCAPD2Q15021 1401 aa11.89□□□□□ -0.51
PDLIM5-213ENST00000509357 PRIM1P49642 420 aaKnown RBP11.88□□□□□ -0.51
PDLIM5-213ENST00000509357 STK32BQ9NY57 414 aa11.88□□□□□ -0.51
PDLIM5-213ENST00000509357 PROM2Q8N271 834 aa11.87□□□□□ -0.51
PDLIM5-213ENST00000509357 MEGF6O75095 1541 aa11.86□□□□□ -0.51
PDLIM5-213ENST00000509357 EIF4A2Q14240 407 aaKnown RBP11.86□□□□□ -0.51
PDLIM5-213ENST00000509357 EYA1Q99502 592 aa11.86□□□□□ -0.51
PDLIM5-213ENST00000509357 SPG7Q9UQ90 795 aa11.86□□□□□ -0.51
PDLIM5-213ENST00000509357 PCDH11XQ9BZA7 1347 aa11.86□□□□□ -0.51
PDLIM5-213ENST00000509357 PCDH11YQ9BZA8 1340 aa11.86□□□□□ -0.51
PDLIM5-213ENST00000509357 PPP2R1AP30153 589 aa11.85□□□□□ -0.51
PDLIM5-213ENST00000509357 MTHFSP49914 203 aa11.85□□□□□ -0.51
PDLIM5-213ENST00000509357 PKD1L3Q7Z443 1732 aa11.85□□□□□ -0.51
PDLIM5-213ENST00000509357 ANO8Q9HCE9 1232 aaPredicted RBP11.84□□□□□ -0.51
PDLIM5-213ENST00000509357 PPP1R1BQ9UD71 204 aaPredicted RBP11.84□□□□□ -0.51
PDLIM5-213ENST00000509357 KAT6BQ8WYB5 2073 aa11.83□□□□□ -0.51
PDLIM5-213ENST00000509357 SLC15A2Q16348 729 aa11.83□□□□□ -0.52
PDLIM5-213ENST00000509357 CCDC184Q52MB2 194 aa11.83□□□□□ -0.52
PDLIM5-213ENST00000509357 MPRIPQ6WCQ1 1025 aa11.83□□□□□ -0.52
PDLIM5-213ENST00000509357 SPON1Q9HCB6 807 aa11.83□□□□□ -0.52
PDLIM5-213ENST00000509357 SBF2Q86WG5 1849 aa11.83□□□□□ -0.52
PDLIM5-213ENST00000509357 IL13P35225 146 aa11.82□□□□□ -0.52
PDLIM5-213ENST00000509357 PRKRIP1Q9H875 184 aaPredicted RBP11.82□□□□□ -0.52
PDLIM5-213ENST00000509357 TOGARAM1Q9Y4F4 1720 aa11.82□□□□□ -0.52
PDLIM5-213ENST00000509357 CYP27B1O15528 508 aa11.81□□□□□ -0.52
PDLIM5-213ENST00000509357 SLC27A3Q5K4L6 730 aa11.81□□□□□ -0.52
PDLIM5-213ENST00000509357 AEBP1Q8IUX7 1158 aa11.81□□□□□ -0.52
PDLIM5-213ENST00000509357 CCNL1Q9UK58 526 aaPredicted RBP11.81□□□□□ -0.52
PDLIM5-213ENST00000509357 IGSF1Q8N6C5 1336 aa11.81□□□□□ -0.52
PDLIM5-213ENST00000509357 NHSQ6T4R5 1651 aa11.81□□□□□ -0.52
PDLIM5-213ENST00000509357 RREB1Q92766 1687 aa11.81□□□□□ -0.52
PDLIM5-213ENST00000509357 NUP188Q5SRE5 1749 aa11.8□□□□□ -0.52
PDLIM5-213ENST00000509357 ZBTB7AO95365 584 aa11.8□□□□□ -0.52
PDLIM5-213ENST00000509357 KCNQ4P56696 695 aa11.8□□□□□ -0.52
PDLIM5-213ENST00000509357 IFNL2Q8IZJ0 200 aa11.8□□□□□ -0.52
PDLIM5-213ENST00000509357 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.8□□□□□ -0.521e-9■■■■□ 22.1
PDLIM5-213ENST00000509357 VIRMAQ69YN4 1812 aaKnown RBP11.8□□□□□ -0.52
PDLIM5-213ENST00000509357 PLEKHO1Q53GL0 409 aaPredicted RBP11.79□□□□□ -0.52
PDLIM5-213ENST00000509357 LRRC4BQ9NT99 713 aa11.79□□□□□ -0.52
PDLIM5-213ENST00000509357 TFCP2L1Q9NZI6 479 aa11.79□□□□□ -0.52
PDLIM5-213ENST00000509357 ATF5Q9Y2D1 282 aaPredicted RBP11.79□□□□□ -0.52
PDLIM5-213ENST00000509357 RGPD3A6NKT7 1758 aaPredicted RBP11.78□□□□□ -0.52
PDLIM5-213ENST00000509357 RGPD4Q7Z3J3 1758 aa11.78□□□□□ -0.52
PDLIM5-213ENST00000509357 SULT6B1Q6IMI4 303 aa11.78□□□□□ -0.52
PDLIM5-213ENST00000509357 PDGFDQ9GZP0 370 aaPredicted RBP11.78□□□□□ -0.52
PDLIM5-213ENST00000509357 TMOD3Q9NYL9 352 aa11.78□□□□□ -0.52
PDLIM5-213ENST00000509357 KDRP35968 1356 aa11.78□□□□□ -0.52
PDLIM5-213ENST00000509357 MSH5O43196 834 aa11.77□□□□□ -0.53
PDLIM5-213ENST00000509357 PHKG2P15735 406 aa11.77□□□□□ -0.53
PDLIM5-213ENST00000509357 HMGB2P26583 209 aaKnown RBP11.77□□□□□ -0.53
PDLIM5-213ENST00000509357 ZNF827Q17R98 1081 aa11.77□□□□□ -0.53
PDLIM5-213ENST00000509357 AMOTQ4VCS5 1084 aa11.77□□□□□ -0.53
PDLIM5-213ENST00000509357 C1orf141Q5JVX7 400 aa11.77□□□□□ -0.53
PDLIM5-213ENST00000509357 ZNF530Q6P9A1 599 aaPredicted RBP11.77□□□□□ -0.53
PDLIM5-213ENST00000509357 SMARCC1Q92922 1105 aaPredicted RBP11.77□□□□□ -0.53
PDLIM5-213ENST00000509357 DOT1LQ8TEK3 1739 aa11.77□□□□□ -0.53
PDLIM5-213ENST00000509357 BTAF1O14981 1849 aa11.76□□□□□ -0.53
PDLIM5-213ENST00000509357 LRP5O75197 1615 aa11.76□□□□□ -0.53
PDLIM5-213ENST00000509357 HSP90AB1P08238 724 aaKnown RBP11.76□□□□□ -0.53
PDLIM5-213ENST00000509357 NKX1-1Q15270 411 aaPredicted RBP11.76□□□□□ -0.53
PDLIM5-213ENST00000509357 RALBP1Q15311 655 aa11.76□□□□□ -0.53
PDLIM5-213ENST00000509357 PIGBQ92521 554 aa11.76□□□□□ -0.53
PDLIM5-213ENST00000509357 PALLDQ8WX93 1383 aa11.76□□□□□ -0.53
PDLIM5-213ENST00000509357 DCAF8L1A6NGE4 600 aa11.75□□□□□ -0.53
PDLIM5-213ENST00000509357 DIAPH1O60610 1272 aaKnown RBP11.75□□□□□ -0.53
PDLIM5-213ENST00000509357 AKT1S1Q96B36 256 aa11.75□□□□□ -0.53
PDLIM5-213ENST00000509357 MTFR1LQ9H019 292 aa11.75□□□□□ -0.53
PDLIM5-213ENST00000509357 MYBBP1AQ9BQG0 1328 aaKnown RBP11.75□□□□□ -0.53
PDLIM5-213ENST00000509357 ITGB4P16144 1822 aa11.74□□□□□ -0.53
PDLIM5-213ENST00000509357 DLG5Q8TDM6 1919 aa11.74□□□□□ -0.53
PDLIM5-213ENST00000509357 U2SURPO15042 1029 aaKnown RBP11.74□□□□□ -0.53
PDLIM5-213ENST00000509357 HMOX1P09601 288 aa11.74□□□□□ -0.53
PDLIM5-213ENST00000509357 ADAMTS7Q9UKP4 1686 aa11.74□□□□□ -0.53
PDLIM5-213ENST00000509357 CABP4P57796 275 aa11.73□□□□□ -0.53
PDLIM5-213ENST00000509357 DCAF5Q96JK2 942 aa11.73□□□□□ -0.53
PDLIM5-213ENST00000509357 CFAP53Q96M91 514 aa11.73□□□□□ -0.53
PDLIM5-213ENST00000509357 ERVV-2B6SEH9 535 aa11.72□□□□□ -0.53
PDLIM5-213ENST00000509357 POLD1P28340 1107 aa11.72□□□□□ -0.53
PDLIM5-213ENST00000509357 AK7Q96M32 723 aa11.72□□□□□ -0.53
PDLIM5-213ENST00000509357 RSPH6AQ9H0K4 717 aa11.72□□□□□ -0.53
PDLIM5-213ENST00000509357 SCN11AQ9UI33 1791 aa11.72□□□□□ -0.53
PDLIM5-213ENST00000509357 PLEKHG2Q9H7P9 1386 aa11.71□□□□□ -0.53
PDLIM5-213ENST00000509357 PNPLA7Q6ZV29 1317 aa11.71□□□□□ -0.53
PDLIM5-213ENST00000509357 KLHL34Q8N239 644 aa11.71□□□□□ -0.53
PDLIM5-213ENST00000509357 SLC16A10Q8TF71 515 aa11.71□□□□□ -0.53
PDLIM5-213ENST00000509357 RBM42Q9BTD8 480 aaKnown RBP11.71□□□□□ -0.53
PDLIM5-213ENST00000509357 ASAP1Q9ULH1 1129 aa11.71□□□□□ -0.53
PDLIM5-213ENST00000509357 KDM6AO15550 1401 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms