RNA–Protein interactions for RNA: ENST00000509354.1

TRIO-213, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 801 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-213ENST00000509354 MKRN3Q13064 507 aaKnown RBP10.13□□□□□ -0.79
TRIO-213ENST00000509354 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.13□□□□□ -0.79
TRIO-213ENST00000509354 SLC12A5Q9H2X9 1139 aa10.13□□□□□ -0.79
TRIO-213ENST00000509354 EDC4Q6P2E9 1401 aaKnown RBP10.13□□□□□ -0.79
TRIO-213ENST00000509354 RGPD2P0DJD1 1756 aa10.13□□□□□ -0.79
TRIO-213ENST00000509354 SPATA31A1Q5TZJ5 1347 aa10.12□□□□□ -0.79
TRIO-213ENST00000509354 TTC21AQ8NDW8 1320 aa10.12□□□□□ -0.79
TRIO-213ENST00000509354 NME9Q86XW9 330 aa10.12□□□□□ -0.79
TRIO-213ENST00000509354 OVOS2A0A0J9YW53 1432 aa10.12□□□□□ -0.79
TRIO-213ENST00000509354 OVOS2Q6IE36 1432 aa10.12□□□□□ -0.79
TRIO-213ENST00000509354 SBF2Q86WG5 1849 aa10.12□□□□□ -0.79
TRIO-213ENST00000509354 GALR2O43603 387 aaPredicted RBP10.11□□□□□ -0.79
TRIO-213ENST00000509354 EIF4G2P78344 907 aaKnown RBP eCLIP10.11□□□□□ -0.79
TRIO-213ENST00000509354 FAM182BQ5T319 152 aa10.11□□□□□ -0.79
TRIO-213ENST00000509354 LARP1Q6PKG0 1096 aaKnown RBP10.11□□□□□ -0.79
TRIO-213ENST00000509354 AATKQ6ZMQ8 1374 aa10.11□□□□□ -0.79
TRIO-213ENST00000509354 ONECUT3O60422 494 aaPredicted RBP10.1□□□□□ -0.79
TRIO-213ENST00000509354 HSPA5P11021 654 aaKnown RBP10.1□□□□□ -0.79
TRIO-213ENST00000509354 USP35Q9P2H5 1018 aa10.1□□□□□ -0.79
TRIO-213ENST00000509354 ABCC6O95255 1503 aa10.1□□□□□ -0.79
TRIO-213ENST00000509354 USP31Q70CQ4 1352 aa10.1□□□□□ -0.79
TRIO-213ENST00000509354 PEAK1Q9H792 1746 aa10.1□□□□□ -0.79
TRIO-213ENST00000509354 BLMP54132 1417 aaPredicted RBP10.09□□□□□ -0.79
TRIO-213ENST00000509354 EVX2Q03828 476 aa10.09□□□□□ -0.79
TRIO-213ENST00000509354 NKX1-1Q15270 411 aaPredicted RBP10.09□□□□□ -0.79
TRIO-213ENST00000509354 KRT27Q7Z3Y8 459 aa10.09□□□□□ -0.79
TRIO-213ENST00000509354 HDGFL2Q7Z4V5 671 aaPredicted RBP10.09□□□□□ -0.79
TRIO-213ENST00000509354 NINLQ9Y2I6 1382 aa10.09□□□□□ -0.79
TRIO-213ENST00000509354 FAM208AQ9UK61 1670 aaKnown RBP10.09□□□□□ -0.79
TRIO-213ENST00000509354 CRB1P82279 1406 aa10.08□□□□□ -0.8
TRIO-213ENST00000509354 ANKRD26Q9UPS8 1709 aa10.08□□□□□ -0.8
TRIO-213ENST00000509354 TTLL13PA6NNM8 815 aa10.08□□□□□ -0.8
TRIO-213ENST00000509354 EVA1CP58658 441 aa10.08□□□□□ -0.8
TRIO-213ENST00000509354 ARHGEF25Q86VW2 580 aa10.08□□□□□ -0.8
TRIO-213ENST00000509354 TERF2IPQ9NYB0 399 aa10.08□□□□□ -0.8
TRIO-213ENST00000509354 AXIN2Q9Y2T1 843 aa10.08□□□□□ -0.8
TRIO-213ENST00000509354 ANKRD36BQ8N2N9 1353 aa10.08□□□□□ -0.8
TRIO-213ENST00000509354 TMF1P82094 1093 aa10.07□□□□□ -0.8
TRIO-213ENST00000509354 EFCAB3Q8N7B9 438 aa10.07□□□□□ -0.8
TRIO-213ENST00000509354 DCBLD2Q96PD2 775 aa10.07□□□□□ -0.8
TRIO-213ENST00000509354 PUS7Q96PZ0 661 aaKnown RBP10.07□□□□□ -0.8
TRIO-213ENST00000509354 WASHC2AQ641Q2 1341 aa10.07□□□□□ -0.8
TRIO-213ENST00000509354 RREB1Q92766 1687 aa10.06□□□□□ -0.8
TRIO-213ENST00000509354 GTPBP6O43824 516 aaPredicted RBP10.06□□□□□ -0.8
TRIO-213ENST00000509354 DEFB132Q7Z7B7 95 aa10.06□□□□□ -0.8
TRIO-213ENST00000509354 BMP2KQ9NSY1 1161 aaPredicted RBP10.06□□□□□ -0.8
TRIO-213ENST00000509354 NUP188Q5SRE5 1749 aa10.05□□□□□ -0.8
TRIO-213ENST00000509354 CCDC7Q96M83 1385 aa10.05□□□□□ -0.8
TRIO-213ENST00000509354 GABBR2O75899 941 aa10.05□□□□□ -0.8
TRIO-213ENST00000509354 TCP11L2Q8N4U5 519 aa10.05□□□□□ -0.8
TRIO-213ENST00000509354 KCNH5Q8NCM2 988 aa10.05□□□□□ -0.8
TRIO-213ENST00000509354 TRIM35Q9UPQ4 493 aa10.05□□□□□ -0.8
TRIO-213ENST00000509354 DISP2A7MBM2 1401 aa10.05□□□□□ -0.8
TRIO-213ENST00000509354 KAT6BQ8WYB5 2073 aa10.05□□□□□ -0.8
TRIO-213ENST00000509354 MAP2P11137 1827 aaKnown RBP10.05□□□□□ -0.8
TRIO-213ENST00000509354 WDR17Q8IZU2 1322 aa10.05□□□□□ -0.8
TRIO-213ENST00000509354 SHANK3Q9BYB0 1731 aa10.04□□□□□ -0.8
TRIO-213ENST00000509354 BARGINQ6ZT62 677 aa10.04□□□□□ -0.8
TRIO-213ENST00000509354 SP7Q8TDD2 431 aaPredicted RBP10.04□□□□□ -0.8
TRIO-213ENST00000509354 TRPC6Q9Y210 931 aa10.04□□□□□ -0.8
TRIO-213ENST00000509354 NSD3Q9BZ95 1437 aa10.04□□□□□ -0.8
TRIO-213ENST00000509354 C11orf95C9JLR9 678 aaPredicted RBP10.03□□□□□ -0.8
TRIO-213ENST00000509354 FBLN1P23142 703 aa10.03□□□□□ -0.8
TRIO-213ENST00000509354 TOM1L2Q6ZVM7 507 aa10.03□□□□□ -0.8
TRIO-213ENST00000509354 VSIG10Q8N0Z9 540 aa10.03□□□□□ -0.8
TRIO-213ENST00000509354 POLR3GLQ9BT43 218 aa10.02□□□□□ -0.81
TRIO-213ENST00000509354 MFRPQ9BY79 579 aa10.02□□□□□ -0.81
TRIO-213ENST00000509354 GGNBP2Q9H3C7 697 aa10.02□□□□□ -0.81
TRIO-213ENST00000509354 ERBB3P21860 1342 aa10.02□□□□□ -0.81
TRIO-213ENST00000509354 RGPD3A6NKT7 1758 aaPredicted RBP10.01□□□□□ -0.81
TRIO-213ENST00000509354 RGPD4Q7Z3J3 1758 aa10.01□□□□□ -0.81
TRIO-213ENST00000509354 TNS2Q63HR2 1409 aa10.01□□□□□ -0.81
TRIO-213ENST00000509354 CSB-PGBD3P0DP91 1061 aa10.01□□□□□ -0.81
TRIO-213ENST00000509354 IER5LQ5T953 404 aa10.01□□□□□ -0.81
TRIO-213ENST00000509354 ASTLQ6HA08 431 aaPredicted RBP10.01□□□□□ -0.81
TRIO-213ENST00000509354 CCDC125Q86Z20 511 aa10.01□□□□□ -0.81
TRIO-213ENST00000509354 COG3Q96JB2 828 aa10.01□□□□□ -0.81
TRIO-213ENST00000509354 CARD14Q9BXL6 1004 aa10.01□□□□□ -0.81
TRIO-213ENST00000509354 THRAP3Q9Y2W1 955 aaKnown RBP10.01□□□□□ -0.81
TRIO-213ENST00000509354 NHSQ6T4R5 1651 aa10.01□□□□□ -0.81
TRIO-213ENST00000509354 KIF7Q2M1P5 1343 aa10.01□□□□□ -0.81
TRIO-213ENST00000509354 MAP3K19Q56UN5 1328 aa10.01□□□□□ -0.81
TRIO-213ENST00000509354 OVOS2A0A0G2JMS6 1433 aa10□□□□□ -0.81
TRIO-213ENST00000509354 DOT1LQ8TEK3 1739 aa10□□□□□ -0.81
TRIO-213ENST00000509354 TRIM37O94972 964 aa10□□□□□ -0.81
TRIO-213ENST00000509354 SF3B2Q13435 895 aaKnown RBP10□□□□□ -0.81
TRIO-213ENST00000509354 CDCA8Q53HL2 280 aa10□□□□□ -0.81
TRIO-213ENST00000509354 ANKRD24Q8TF21 1146 aa10□□□□□ -0.81
TRIO-213ENST00000509354 CARD10Q9BWT7 1032 aa10□□□□□ -0.81
TRIO-213ENST00000509354 BTAF1O14981 1849 aa10□□□□□ -0.81
TRIO-213ENST00000509354 FYB1O15117 783 aa9.99□□□□□ -0.81
TRIO-213ENST00000509354 EN1Q05925 392 aaPredicted RBP9.99□□□□□ -0.81
TRIO-213ENST00000509354 PDE3BQ13370 1112 aa9.99□□□□□ -0.81
TRIO-213ENST00000509354 ATMINO43313 823 aaPredicted RBP9.98□□□□□ -0.81
TRIO-213ENST00000509354 BAG6P46379 1132 aa9.98□□□□□ -0.81
TRIO-213ENST00000509354 DDX10Q13206 875 aaKnown RBP9.98□□□□□ -0.81
TRIO-213ENST00000509354 RRS1Q15050 365 aaKnown RBP9.98□□□□□ -0.81
TRIO-213ENST00000509354 DDB1Q16531 1140 aa9.98□□□□□ -0.81
TRIO-213ENST00000509354 LTV1Q96GA3 475 aaPredicted RBP9.98□□□□□ -0.81
TRIO-213ENST00000509354 NLRP2Q9NX02 1062 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 147.8 ms