RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 HSPA1AP0DMV8 641 aaKnown RBP5.73□□□□□ -1.49
RNF4-211ENST00000509206 HSPA1BP0DMV9 641 aaKnown RBP5.73□□□□□ -1.49
RNF4-211ENST00000509206 CFAP70Q5T0N1 1121 aa5.73□□□□□ -1.49
RNF4-211ENST00000509206 RBM46Q8TBY0 533 aaKnown RBP5.73□□□□□ -1.49
RNF4-211ENST00000509206 NUDT16Q96DE0 195 aaKnown RBP5.73□□□□□ -1.49
RNF4-211ENST00000509206 C14orf93Q9H972 538 aaKnown RBP5.73□□□□□ -1.49
RNF4-211ENST00000509206 TRAK1Q9UPV9 953 aa5.73□□□□□ -1.49
RNF4-211ENST00000509206 ATP7BP35670 1465 aa5.72□□□□□ -1.49
RNF4-211ENST00000509206 LOC105371045A0A1W2PR82 267 aa5.72□□□□□ -1.49
RNF4-211ENST00000509206 FSTL1Q12841 308 aa5.72□□□□□ -1.49
RNF4-211ENST00000509206 SLC27A3Q5K4L6 730 aa5.72□□□□□ -1.49
RNF4-211ENST00000509206 MSL1Q68DK7 614 aa5.72□□□□□ -1.49
RNF4-211ENST00000509206 CCDC61Q9Y6R9 512 aa5.72□□□□□ -1.49
RNF4-211ENST00000509206 RGPD3A6NKT7 1758 aaPredicted RBP5.72□□□□□ -1.49
RNF4-211ENST00000509206 RGPD4Q7Z3J3 1758 aa5.72□□□□□ -1.49
RNF4-211ENST00000509206 PRR36Q9H6K5 1346 aa5.72□□□□□ -1.49
RNF4-211ENST00000509206 BRD4O60885 1362 aaPredicted RBP5.71□□□□□ -1.5
RNF4-211ENST00000509206 CPDO75976 1380 aa5.71□□□□□ -1.5
RNF4-211ENST00000509206 STK25O00506 426 aa5.71□□□□□ -1.5
RNF4-211ENST00000509206 CHRM1P11229 460 aaPredicted RBP5.71□□□□□ -1.5
RNF4-211ENST00000509206 FAM161AQ3B820 660 aa5.71□□□□□ -1.5
RNF4-211ENST00000509206 SYTL4Q96C24 671 aaPredicted RBP5.71□□□□□ -1.5
RNF4-211ENST00000509206 GOLGB1Q14789 3259 aaKnown RBP5.71□□□□□ -1.5
RNF4-211ENST00000509206 ACEP12821 1306 aa5.71□□□□□ -1.5
RNF4-211ENST00000509206 PNPLA7Q6ZV29 1317 aa5.71□□□□□ -1.5
RNF4-211ENST00000509206 ADCY9O60503 1353 aa5.7□□□□□ -1.5
RNF4-211ENST00000509206 HMGB2P26583 209 aaKnown RBP5.7□□□□□ -1.5
RNF4-211ENST00000509206 NLRP6P59044 892 aa5.7□□□□□ -1.5
RNF4-211ENST00000509206 ARHGAP27Q6ZUM4 889 aa5.7□□□□□ -1.5
RNF4-211ENST00000509206 CARD10Q9BWT7 1032 aa5.7□□□□□ -1.5
RNF4-211ENST00000509206 NMRK2Q9NPI5 230 aa5.7□□□□□ -1.5
RNF4-211ENST00000509206 LRRC4BQ9NT99 713 aa5.7□□□□□ -1.5
RNF4-211ENST00000509206 BCL9O00512 1426 aa5.7□□□□□ -1.5
RNF4-211ENST00000509206 IFT172Q9UG01 1749 aa5.7□□□□□ -1.5
RNF4-211ENST00000509206 WDR17Q8IZU2 1322 aa5.7□□□□□ -1.5
RNF4-211ENST00000509206 IGSF1Q8N6C5 1336 aa5.7□□□□□ -1.5
RNF4-211ENST00000509206 ALS2Q96Q42 1657 aa5.69□□□□□ -1.5
RNF4-211ENST00000509206 PARP4Q9UKK3 1724 aaKnown RBP5.69□□□□□ -1.5
RNF4-211ENST00000509206 USP6P35125 1406 aa5.69□□□□□ -1.5
RNF4-211ENST00000509206 PYGBP11216 843 aa5.69□□□□□ -1.5
RNF4-211ENST00000509206 KCNQ4P56696 695 aa5.69□□□□□ -1.5
RNF4-211ENST00000509206 MLLT1Q03111 559 aaPredicted RBP5.69□□□□□ -1.5
RNF4-211ENST00000509206 NKX1-1Q15270 411 aaPredicted RBP5.69□□□□□ -1.5
RNF4-211ENST00000509206 CDK19Q9BWU1 502 aa5.69□□□□□ -1.5
RNF4-211ENST00000509206 COL5A2P05997 1499 aaPredicted RBP5.69□□□□□ -1.5
RNF4-211ENST00000509206 KDM2BQ8NHM5 1336 aa5.69□□□□□ -1.5
RNF4-211ENST00000509206 TRPM3Q9HCF6 1732 aaPredicted RBP5.68□□□□□ -1.5
RNF4-211ENST00000509206 KAT6BQ8WYB5 2073 aa5.68□□□□□ -1.5
RNF4-211ENST00000509206 SOX12O15370 315 aa5.68□□□□□ -1.5
RNF4-211ENST00000509206 GALR2O43603 387 aaPredicted RBP5.68□□□□□ -1.5
RNF4-211ENST00000509206 COL23A1Q86Y22 540 aaPredicted RBP5.68□□□□□ -1.5
RNF4-211ENST00000509206 SMC1BQ8NDV3 1235 aa5.68□□□□□ -1.5
RNF4-211ENST00000509206 FLAD1Q8NFF5 587 aa5.68□□□□□ -1.5
RNF4-211ENST00000509206 AIDAQ96BJ3 306 aa5.68□□□□□ -1.5
RNF4-211ENST00000509206 KIF12Q96FN5 646 aa5.68□□□□□ -1.5
RNF4-211ENST00000509206 DCBLD2Q96PD2 775 aa5.68□□□□□ -1.5
RNF4-211ENST00000509206 NLRP2Q9NX02 1062 aa5.68□□□□□ -1.5
RNF4-211ENST00000509206 CCNL1Q9UK58 526 aaPredicted RBP5.68□□□□□ -1.5
RNF4-211ENST00000509206 PPLO60437 1756 aa5.67□□□□□ -1.5
RNF4-211ENST00000509206 SBF2Q86WG5 1849 aa5.67□□□□□ -1.5
RNF4-211ENST00000509206 PIK3C2GO75747 1445 aa5.67□□□□□ -1.5
RNF4-211ENST00000509206 MAP3K13O43283 966 aa5.67□□□□□ -1.5
RNF4-211ENST00000509206 DDX54Q8TDD1 881 aaKnown RBP5.67□□□□□ -1.5
RNF4-211ENST00000509206 MS4A3Q96HJ5 214 aa5.67□□□□□ -1.5
RNF4-211ENST00000509206 RRAGCQ9HB90 399 aa5.67□□□□□ -1.5
RNF4-211ENST00000509206 BCS1LQ9Y276 419 aa5.67□□□□□ -1.5
RNF4-211ENST00000509206 AXIN2Q9Y2T1 843 aa5.67□□□□□ -1.5
RNF4-211ENST00000509206 PCDHB13Q9Y5F0 798 aa5.67□□□□□ -1.5
RNF4-211ENST00000509206 STK24Q9Y6E0 443 aa5.67□□□□□ -1.5
RNF4-211ENST00000509206 KNDC1Q76NI1 1749 aa5.67□□□□□ -1.5
RNF4-211ENST00000509206 PEAK1Q9H792 1746 aa5.67□□□□□ -1.5
RNF4-211ENST00000509206 USP19O94966 1318 aa5.67□□□□□ -1.5
RNF4-211ENST00000509206 TOPAZ1Q8N9V7 1692 aa5.66□□□□□ -1.5
RNF4-211ENST00000509206 TULP4Q9NRJ4 1543 aa5.66□□□□□ -1.5
RNF4-211ENST00000509206 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.66□□□□□ -1.5
RNF4-211ENST00000509206 PLEKHG3A1L390 1219 aa5.66□□□□□ -1.5
RNF4-211ENST00000509206 CCDC85CA6NKD9 419 aa5.66□□□□□ -1.5
RNF4-211ENST00000509206 GTPBP6O43824 516 aaPredicted RBP5.66□□□□□ -1.5
RNF4-211ENST00000509206 PRKCSHP14314 528 aaPredicted RBP5.66□□□□□ -1.5
RNF4-211ENST00000509206 IL2RBP14784 551 aa5.66□□□□□ -1.5
RNF4-211ENST00000509206 SRPK2P78362 688 aaKnown RBP5.66□□□□□ -1.5
RNF4-211ENST00000509206 KCNH5Q8NCM2 988 aa5.66□□□□□ -1.5
RNF4-211ENST00000509206 ZFP91Q96JP5 570 aaPredicted RBP5.66□□□□□ -1.5
RNF4-211ENST00000509206 CCDC7Q96M83 1385 aa5.66□□□□□ -1.5
RNF4-211ENST00000509206 PRIM1P49642 420 aaKnown RBP5.65□□□□□ -1.5
RNF4-211ENST00000509206 CTCFP49711 727 aaPredicted RBP5.65□□□□□ -1.5
RNF4-211ENST00000509206 C9orf131Q5VYM1 1079 aa5.65□□□□□ -1.5
RNF4-211ENST00000509206 PRDM10Q9NQV6 1147 aa5.65□□□□□ -1.5
RNF4-211ENST00000509206 WDR90Q96KV7 1748 aa5.65□□□□□ -1.51
RNF4-211ENST00000509206 LRRC37A3O60309 1634 aa5.64□□□□□ -1.51
RNF4-211ENST00000509206 PHRF1Q9P1Y6 1649 aaKnown RBP5.64□□□□□ -1.51
RNF4-211ENST00000509206 FCHSD2O94868 740 aa5.64□□□□□ -1.51
RNF4-211ENST00000509206 ABHD8Q96I13 439 aa5.64□□□□□ -1.51
RNF4-211ENST00000509206 AK7Q96M32 723 aa5.64□□□□□ -1.51
RNF4-211ENST00000509206 POLR3AO14802 1390 aaPredicted RBP5.64□□□□□ -1.51
RNF4-211ENST00000509206 CRYBG1Q9Y4K1 1723 aa5.63□□□□□ -1.51
RNF4-211ENST00000509206 FOXN1O15353 648 aa5.63□□□□□ -1.51
RNF4-211ENST00000509206 PHF14O94880 888 aa5.63□□□□□ -1.51
RNF4-211ENST00000509206 ARHGEF25Q86VW2 580 aa5.63□□□□□ -1.51
RNF4-211ENST00000509206 RYDENQ9NUL5 291 aaKnown RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms