RNA–Protein interactions for RNA: ENST00000509085.5

HMGCR-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 1 (best)

Gene HMGCR, Length 637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-207ENST00000509085 COG3Q96JB2 828 aa12.36□□□□□ -0.43
HMGCR-207ENST00000509085 SHANK3Q9BYB0 1731 aa12.36□□□□□ -0.43
HMGCR-207ENST00000509085 CGNL1Q0VF96 1302 aa12.36□□□□□ -0.43
HMGCR-207ENST00000509085 PNPLA7Q6ZV29 1317 aa12.36□□□□□ -0.43
HMGCR-207ENST00000509085 TFCP2L1Q9NZI6 479 aa12.35□□□□□ -0.43
HMGCR-207ENST00000509085 HOXC9P31274 260 aa12.34□□□□□ -0.43
HMGCR-207ENST00000509085 AMPHP49418 695 aa12.34□□□□□ -0.43
HMGCR-207ENST00000509085 C1QTNF8P60827 252 aa12.34□□□□□ -0.43
HMGCR-207ENST00000509085 ZCRB1Q8TBF4 217 aaKnown RBP12.34□□□□□ -0.43
HMGCR-207ENST00000509085 SYTL4Q96C24 671 aaPredicted RBP12.34□□□□□ -0.43
HMGCR-207ENST00000509085 SMG6Q86US8 1419 aaKnown RBP12.34□□□□□ -0.43
HMGCR-207ENST00000509085 MAP3K19Q56UN5 1328 aa12.34□□□□□ -0.43
HMGCR-207ENST00000509085 NSD2O96028 1365 aa12.33□□□□□ -0.44
HMGCR-207ENST00000509085 PRIM1P49642 420 aaKnown RBP12.33□□□□□ -0.44
HMGCR-207ENST00000509085 LTV1Q96GA3 475 aaPredicted RBP12.33□□□□□ -0.44
HMGCR-207ENST00000509085 MEGF6O75095 1541 aa12.32□□□□□ -0.44
HMGCR-207ENST00000509085 USP47Q96K76 1375 aa12.32□□□□□ -0.44
HMGCR-207ENST00000509085 SENP3-EIF4A1A0A087X0R7 540 aa12.32□□□□□ -0.44
HMGCR-207ENST00000509085 KLHL34Q8N239 644 aa12.32□□□□□ -0.44
HMGCR-207ENST00000509085 CCNL1Q9UK58 526 aaPredicted RBP12.32□□□□□ -0.44
HMGCR-207ENST00000509085 RGPD2P0DJD1 1756 aa12.32□□□□□ -0.44
HMGCR-207ENST00000509085 GRIN3BO60391 1043 aa12.31□□□□□ -0.44
HMGCR-207ENST00000509085 GIGYF1O75420 1035 aaPredicted RBP12.31□□□□□ -0.44
HMGCR-207ENST00000509085 TESK2Q96S53 571 aa12.31□□□□□ -0.44
HMGCR-207ENST00000509085 C5P01031 1676 aa12.31□□□□□ -0.44
HMGCR-207ENST00000509085 KIF24Q5T7B8 1368 aa12.3□□□□□ -0.44
HMGCR-207ENST00000509085 RAPGEF4Q8WZA2 1011 aa12.3□□□□□ -0.44
HMGCR-207ENST00000509085 PELP1Q8IZL8 1130 aaKnown RBP12.29□□□□□ -0.44
HMGCR-207ENST00000509085 FLAD1Q8NFF5 587 aa12.29□□□□□ -0.44
HMGCR-207ENST00000509085 PCDH11XQ9BZA7 1347 aa12.29□□□□□ -0.44
HMGCR-207ENST00000509085 PCDH11YQ9BZA8 1340 aa12.29□□□□□ -0.44
HMGCR-207ENST00000509085 KIF20BQ96Q89 1820 aa12.28□□□□□ -0.44
HMGCR-207ENST00000509085 ST20-MTHFSA0A0A6YYL1 179 aa12.28□□□□□ -0.44
HMGCR-207ENST00000509085 TATP17735 454 aaPredicted RBP12.28□□□□□ -0.44
HMGCR-207ENST00000509085 TAF1LQ8IZX4 1826 aa12.27□□□□□ -0.44
HMGCR-207ENST00000509085 GOLGB1Q14789 3259 aaKnown RBP12.27□□□□□ -0.45
HMGCR-207ENST00000509085 KCNQ4P56696 695 aa12.27□□□□□ -0.45
HMGCR-207ENST00000509085 NLGN2Q8NFZ4 835 aa12.27□□□□□ -0.45
HMGCR-207ENST00000509085 INSRP06213 1382 aa12.27□□□□□ -0.45
HMGCR-207ENST00000509085 FLT4P35916 1363 aa12.27□□□□□ -0.45
HMGCR-207ENST00000509085 NSD3Q9BZ95 1437 aa12.27□□□□□ -0.45
HMGCR-207ENST00000509085 TMF1P82094 1093 aa12.26□□□□□ -0.45
HMGCR-207ENST00000509085 NBPF6Q5VWK0 638 aa12.26□□□□□ -0.45
HMGCR-207ENST00000509085 COL23A1Q86Y22 540 aaPredicted RBP12.26□□□□□ -0.45
HMGCR-207ENST00000509085 NBPF4Q96M43 638 aa12.26□□□□□ -0.45
HMGCR-207ENST00000509085 PKD1L3Q7Z443 1732 aa12.25□□□□□ -0.45
HMGCR-207ENST00000509085 FYB1O15117 783 aa12.25□□□□□ -0.45
HMGCR-207ENST00000509085 RRS1Q15050 365 aaKnown RBP12.25□□□□□ -0.45
HMGCR-207ENST00000509085 CDCA8Q53HL2 280 aa12.25□□□□□ -0.45
HMGCR-207ENST00000509085 SMARCC1Q92922 1105 aaPredicted RBP12.25□□□□□ -0.45
HMGCR-207ENST00000509085 CD2APQ9Y5K6 639 aa12.25□□□□□ -0.45
HMGCR-207ENST00000509085 PALLDQ8WX93 1383 aa12.25□□□□□ -0.45
HMGCR-207ENST00000509085 C4BP0C0L5 1744 aa12.24□□□□□ -0.45
HMGCR-207ENST00000509085 ITGB4P16144 1822 aa12.23□□□□□ -0.45
HMGCR-207ENST00000509085 YBX3P16989 372 aaKnown RBP eCLIP12.23□□□□□ -0.453e-7■■□□□ 12.8
HMGCR-207ENST00000509085 FBLN1P23142 703 aa12.23□□□□□ -0.45
HMGCR-207ENST00000509085 USHBP1Q8N6Y0 703 aa12.23□□□□□ -0.45
HMGCR-207ENST00000509085 GGNBP2Q9H3C7 697 aa12.23□□□□□ -0.45
HMGCR-207ENST00000509085 TOGARAM1Q9Y4F4 1720 aa12.23□□□□□ -0.45
HMGCR-207ENST00000509085 NCAPD2Q15021 1401 aa12.22□□□□□ -0.45
HMGCR-207ENST00000509085 AK7Q96M32 723 aa12.22□□□□□ -0.45
HMGCR-207ENST00000509085 UBR3Q6ZT12 1888 aa12.22□□□□□ -0.45
HMGCR-207ENST00000509085 ANKRD26Q9UPS8 1709 aa12.22□□□□□ -0.45
HMGCR-207ENST00000509085 ATP10DQ9P241 1426 aa12.21□□□□□ -0.45
HMGCR-207ENST00000509085 HSP90AB2PQ58FF8 381 aa12.21□□□□□ -0.45
HMGCR-207ENST00000509085 MSL1Q68DK7 614 aa12.21□□□□□ -0.45
HMGCR-207ENST00000509085 MPRIPQ6WCQ1 1025 aa12.21□□□□□ -0.45
HMGCR-207ENST00000509085 PLEKHG2Q9H7P9 1386 aa12.2□□□□□ -0.46
HMGCR-207ENST00000509085 CYP27B1O15528 508 aa12.2□□□□□ -0.46
HMGCR-207ENST00000509085 ADCY9O60503 1353 aa12.19□□□□□ -0.46
HMGCR-207ENST00000509085 SSFA2P28290 1259 aa12.19□□□□□ -0.46
HMGCR-207ENST00000509085 NKX1-1Q15270 411 aaPredicted RBP12.19□□□□□ -0.46
HMGCR-207ENST00000509085 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.19□□□□□ -0.465e-13■□□□□ 9.3
HMGCR-207ENST00000509085 SPG7Q9UQ90 795 aa12.19□□□□□ -0.46
HMGCR-207ENST00000509085 MAP2P11137 1827 aaKnown RBP12.18□□□□□ -0.46
HMGCR-207ENST00000509085 GPBP1L1Q9HC44 474 aaPredicted RBP12.18□□□□□ -0.46
HMGCR-207ENST00000509085 CICQ96RK0 1608 aaPredicted RBP12.16□□□□□ -0.46
HMGCR-207ENST00000509085 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.16□□□□□ -0.46
HMGCR-207ENST00000509085 PIGBQ92521 554 aa12.16□□□□□ -0.46
HMGCR-207ENST00000509085 ZNF831Q5JPB2 1677 aa12.16□□□□□ -0.46
HMGCR-207ENST00000509085 WASHC2AQ641Q2 1341 aa12.15□□□□□ -0.46
HMGCR-207ENST00000509085 IGSF1Q8N6C5 1336 aa12.15□□□□□ -0.46
HMGCR-207ENST00000509085 LOC102724428A0A0B4J2F2 783 aa12.15□□□□□ -0.46
HMGCR-207ENST00000509085 PHF14O94880 888 aa12.15□□□□□ -0.46
HMGCR-207ENST00000509085 SIK1P57059 783 aa12.15□□□□□ -0.46
HMGCR-207ENST00000509085 TMOD3Q9NYL9 352 aa12.15□□□□□ -0.46
HMGCR-207ENST00000509085 EMILIN1Q9Y6C2 1016 aa12.15□□□□□ -0.46
HMGCR-207ENST00000509085 KIF13BQ9NQT8 1826 aa12.14□□□□□ -0.47
HMGCR-207ENST00000509085 IFFO2Q5TF58 517 aa12.14□□□□□ -0.47
HMGCR-207ENST00000509085 CEP350Q5VT06 3117 aa12.14□□□□□ -0.47
HMGCR-207ENST00000509085 HSPA6P17066 643 aa12.13□□□□□ -0.47
HMGCR-207ENST00000509085 IFNL2Q8IZJ0 200 aa12.13□□□□□ -0.47
HMGCR-207ENST00000509085 CARD14Q9BXL6 1004 aa12.13□□□□□ -0.47
HMGCR-207ENST00000509085 GNPATO15228 680 aa12.12□□□□□ -0.47
HMGCR-207ENST00000509085 PPM1GO15355 546 aaPredicted RBP12.12□□□□□ -0.47
HMGCR-207ENST00000509085 PHKG2P15735 406 aa12.12□□□□□ -0.47
HMGCR-207ENST00000509085 AMIGO3Q86WK7 504 aa12.12□□□□□ -0.47
HMGCR-207ENST00000509085 LINC00116Q8NCU8 138 aa12.12□□□□□ -0.47
HMGCR-207ENST00000509085 ATP6V1AP38606 617 aa12.11□□□□□ -0.47
HMGCR-207ENST00000509085 EYA1Q99502 592 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms